RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 NRN1Q9NPD7 142 aa12.4□□□□□ -0.42
SNCA-209ENST00000506244 K7EQG2 157 aa12.39□□□□□ -0.43
SNCA-209ENST00000506244 SIX6O95475 246 aa12.39□□□□□ -0.43
SNCA-209ENST00000506244 SULT1A1P50225 295 aa12.39□□□□□ -0.43
SNCA-209ENST00000506244 RAB31Q13636 194 aa12.39□□□□□ -0.43
SNCA-209ENST00000506244 SAMD13Q5VXD3 122 aa12.39□□□□□ -0.43
SNCA-209ENST00000506244 DCANP1Q8TF63 244 aa12.39□□□□□ -0.43
SNCA-209ENST00000506244 CITED4Q96RK1 184 aa12.39□□□□□ -0.43
SNCA-209ENST00000506244 KIR2DL5BA0A0G2JN68 375 aa12.38□□□□□ -0.43
SNCA-209ENST00000506244 KIR2DL5BA0A0G2JPC4 375 aa12.38□□□□□ -0.43
SNCA-209ENST00000506244 FAM24AA6NFZ4 105 aa12.38□□□□□ -0.43
SNCA-209ENST00000506244 E5RGE8 158 aa12.38□□□□□ -0.43
SNCA-209ENST00000506244 CST7O76096 145 aa12.38□□□□□ -0.43
SNCA-209ENST00000506244 LINC00869P0C866 280 aa12.38□□□□□ -0.43
SNCA-209ENST00000506244 S100A11P31949 105 aa12.38□□□□□ -0.43
SNCA-209ENST00000506244 RAP2BP61225 183 aa12.38□□□□□ -0.43
SNCA-209ENST00000506244 SNRPD3P62318 126 aaKnown RBP12.38□□□□□ -0.43
SNCA-209ENST00000506244 KIR2DL5AQ8N109 375 aa12.38□□□□□ -0.43
SNCA-209ENST00000506244 TMEM217Q8N7C4 229 aa12.38□□□□□ -0.43
SNCA-209ENST00000506244 OR1B1Q8NGR6 318 aa12.38□□□□□ -0.43
SNCA-209ENST00000506244 KIR2DL5BQ8NHK3 375 aa12.38□□□□□ -0.43
SNCA-209ENST00000506244 GPR82Q96P67 336 aa12.38□□□□□ -0.43
SNCA-209ENST00000506244 SEPSECSQ9HD40 501 aaKnown RBP12.38□□□□□ -0.43
SNCA-209ENST00000506244 UQCC1Q9NVA1 299 aa12.38□□□□□ -0.43
SNCA-209ENST00000506244 RNF24Q9Y225 148 aa12.38□□□□□ -0.43
SNCA-209ENST00000506244 HUWE1Q7Z6Z7 4374 aaKnown RBP12.38□□□□□ -0.43
SNCA-209ENST00000506244 UBE2CO00762 179 aa12.37□□□□□ -0.43
SNCA-209ENST00000506244 ORM2P19652 201 aa12.37□□□□□ -0.43
SNCA-209ENST00000506244 DEFB131AP59861 70 aa12.37□□□□□ -0.43
SNCA-209ENST00000506244 ARL16Q0P5N6 197 aa12.37□□□□□ -0.43
SNCA-209ENST00000506244 LRRC37A5PQ49AS3 106 aa12.37□□□□□ -0.43
SNCA-209ENST00000506244 PXDC1Q5TGL8 231 aa12.37□□□□□ -0.43
SNCA-209ENST00000506244 APRG1Q8IVJ8 170 aa12.37□□□□□ -0.43
SNCA-209ENST00000506244 OR8I2Q8N0Y5 310 aa12.37□□□□□ -0.43
SNCA-209ENST00000506244 TMEM252Q8N6L7 170 aa12.37□□□□□ -0.43
SNCA-209ENST00000506244 SLC25A31Q9H0C2 315 aa12.37□□□□□ -0.43
SNCA-209ENST00000506244 IGSF23A1L1A6 192 aa12.36□□□□□ -0.43
SNCA-209ENST00000506244 ZNF688P0C7X2 276 aa12.36□□□□□ -0.43
SNCA-209ENST00000506244 GATA2P23769 480 aaPredicted RBP12.36□□□□□ -0.43
SNCA-209ENST00000506244 GALR1P47211 349 aa12.36□□□□□ -0.43
SNCA-209ENST00000506244 MEOX2P50222 304 aa12.36□□□□□ -0.43
SNCA-209ENST00000506244 H2BFSP57053 126 aa12.36□□□□□ -0.43
SNCA-209ENST00000506244 PLP1P60201 277 aa12.36□□□□□ -0.43
SNCA-209ENST00000506244 ATP6V1FQ16864 119 aa12.36□□□□□ -0.43
SNCA-209ENST00000506244 STPG3Q8N7X2 389 aa12.36□□□□□ -0.43
SNCA-209ENST00000506244 PPP1R1CQ8WVI7 109 aa12.36□□□□□ -0.43
SNCA-209ENST00000506244 HIGD1AQ9Y241 93 aa12.36□□□□□ -0.43
SNCA-209ENST00000506244 ALG5Q9Y673 324 aa12.36□□□□□ -0.43
SNCA-209ENST00000506244 STAB2Q8WWQ8 2551 aa12.35□□□□□ -0.43
SNCA-209ENST00000506244 AGPAT2O15120 278 aa12.35□□□□□ -0.43
SNCA-209ENST00000506244 HYPMO75409 117 aa12.35□□□□□ -0.43
SNCA-209ENST00000506244 BAXQ07812 192 aa12.35□□□□□ -0.43
SNCA-209ENST00000506244 RGS21Q2M5E4 152 aa12.35□□□□□ -0.43
SNCA-209ENST00000506244 STHQ8IWL8 128 aa12.35□□□□□ -0.43
SNCA-209ENST00000506244 FAM24BQ8N5W8 94 aa12.35□□□□□ -0.43
SNCA-209ENST00000506244 DOK5Q9P104 306 aa12.35□□□□□ -0.43
SNCA-209ENST00000506244 UBE2L5PA0A1B0GUS4 154 aa12.34□□□□□ -0.43
SNCA-209ENST00000506244 ZNF98A6NK75 572 aa12.34□□□□□ -0.43
SNCA-209ENST00000506244 OR5G3P0C626 314 aa12.34□□□□□ -0.43
SNCA-209ENST00000506244 RPL35AP18077 110 aaKnown RBP12.34□□□□□ -0.43
SNCA-209ENST00000506244 ID1P41134 155 aa12.34□□□□□ -0.43
SNCA-209ENST00000506244 CAMLGP49069 296 aa12.34□□□□□ -0.43
SNCA-209ENST00000506244 VWC2Q2TAL6 325 aa12.34□□□□□ -0.43
SNCA-209ENST00000506244 LEMD1Q68G75 181 aa12.34□□□□□ -0.43
SNCA-209ENST00000506244 TMEM182Q6ZP80 229 aaPredicted RBP12.34□□□□□ -0.43
SNCA-209ENST00000506244 Q6ZWC4 215 aa12.34□□□□□ -0.43
SNCA-209ENST00000506244 SLC25A22Q9H936 323 aa12.34□□□□□ -0.43
SNCA-209ENST00000506244 TP53TG1Q9Y2A0 90 aa12.34□□□□□ -0.43
SNCA-209ENST00000506244 H3BRN7 92 aa12.33□□□□□ -0.44
SNCA-209ENST00000506244 PSMB3P49720 205 aa12.33□□□□□ -0.44
SNCA-209ENST00000506244 EWSR1Q01844 656 aaKnown RBP eCLIP12.33□□□□□ -0.44
SNCA-209ENST00000506244 ZNF124Q15973 351 aa12.33□□□□□ -0.44
SNCA-209ENST00000506244 PSMG4Q5JS54 123 aa12.33□□□□□ -0.44
SNCA-209ENST00000506244 MGST2Q99735 147 aa12.33□□□□□ -0.44
SNCA-209ENST00000506244 SHANK2-AS3Q9BTD1 123 aa12.33□□□□□ -0.44
SNCA-209ENST00000506244 SLC25A39Q9BZJ4 359 aaPredicted RBP12.33□□□□□ -0.44
SNCA-209ENST00000506244 ARL6Q9H0F7 186 aa12.33□□□□□ -0.44
SNCA-209ENST00000506244 SLC25A32Q9H2D1 315 aa12.33□□□□□ -0.44
SNCA-209ENST00000506244 RETNQ9HD89 108 aa12.33□□□□□ -0.44
SNCA-209ENST00000506244 OR5AC2Q9NZP5 309 aa12.33□□□□□ -0.44
SNCA-209ENST00000506244 WDR83OSQ9Y284 106 aa12.33□□□□□ -0.44
SNCA-209ENST00000506244 COX7A2P2O60397 106 aa12.32□□□□□ -0.44
SNCA-209ENST00000506244 MPDU1O75352 247 aa12.32□□□□□ -0.44
SNCA-209ENST00000506244 MPC2O95563 127 aa12.32□□□□□ -0.44
SNCA-209ENST00000506244 RPL7P18124 248 aaKnown RBP12.32□□□□□ -0.44
SNCA-209ENST00000506244 Q6ZRG5 221 aa12.32□□□□□ -0.44
SNCA-209ENST00000506244 SCRT1Q9BWW7 348 aa12.32□□□□□ -0.44
SNCA-209ENST00000506244 CSTL1Q9H114 145 aa12.32□□□□□ -0.44
SNCA-209ENST00000506244 MED28Q9H204 178 aa12.32□□□□□ -0.44
SNCA-209ENST00000506244 ARV1Q9H2C2 271 aa12.32□□□□□ -0.44
SNCA-209ENST00000506244 ELOA3CA0A087WX78 387 aaPredicted RBP12.31□□□□□ -0.44
SNCA-209ENST00000506244 H0YIZ8 118 aa12.31□□□□□ -0.44
SNCA-209ENST00000506244 ISLRO14498 428 aa12.31□□□□□ -0.44
SNCA-209ENST00000506244 OR5C1Q8NGR4 320 aa12.31□□□□□ -0.44
SNCA-209ENST00000506244 KCNIP2Q9NS61 270 aa12.31□□□□□ -0.44
SNCA-209ENST00000506244 SPP1P10451 314 aa12.3□□□□□ -0.44
SNCA-209ENST00000506244 ATF4P18848 351 aaPredicted RBP12.3□□□□□ -0.44
SNCA-209ENST00000506244 FGF7P21781 194 aa12.3□□□□□ -0.44
SNCA-209ENST00000506244 DEFB135Q30KP9 77 aa12.3□□□□□ -0.44
SNCA-209ENST00000506244 TMEM41BQ5BJD5 291 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 646 ms