RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 NHLH2Q02577 135 aa12.57□□□□□ -0.4
SYNE4-207ENST00000505054 C16orf54Q6UWD8 224 aa12.57□□□□□ -0.4
SYNE4-207ENST00000505054 BPIFCQ8NFQ6 507 aa12.57□□□□□ -0.4
SYNE4-207ENST00000505054 GLMPQ8WWB7 406 aa12.57□□□□□ -0.4
SYNE4-207ENST00000505054 NARS2Q96I59 477 aaKnown RBP12.57□□□□□ -0.4
SYNE4-207ENST00000505054 TMEM147Q9BVK8 224 aa12.57□□□□□ -0.4
SYNE4-207ENST00000505054 SLC25A31Q9H0C2 315 aa12.57□□□□□ -0.4
SYNE4-207ENST00000505054 UQCC1Q9NVA1 299 aa12.57□□□□□ -0.4
SYNE4-207ENST00000505054 CSMD3Q7Z407 3707 aa12.57□□□□□ -0.4
SYNE4-207ENST00000505054 DNAH1Q9P2D7 4330 aa12.56□□□□□ -0.4
SYNE4-207ENST00000505054 OR4C46A6NHA9 309 aa12.56□□□□□ -0.4
SYNE4-207ENST00000505054 BUB3O43684 328 aa12.56□□□□□ -0.4
SYNE4-207ENST00000505054 CFDP00746 253 aaPredicted RBP12.56□□□□□ -0.4
SYNE4-207ENST00000505054 CD5P06127 495 aa12.56□□□□□ -0.4
SYNE4-207ENST00000505054 GBGT1Q8N5D6 347 aa12.56□□□□□ -0.4
SYNE4-207ENST00000505054 GRAMD2BQ96HH9 432 aa12.56□□□□□ -0.4
SYNE4-207ENST00000505054 MGST2Q99735 147 aa12.56□□□□□ -0.4
SYNE4-207ENST00000505054 WDR83OSQ9Y284 106 aa12.56□□□□□ -0.4
SYNE4-207ENST00000505054 UBE2L5PA0A1B0GUS4 154 aa12.55□□□□□ -0.4
SYNE4-207ENST00000505054 AGPAT2O15120 278 aa12.55□□□□□ -0.4
SYNE4-207ENST00000505054 GIPP09681 153 aaPredicted RBP12.55□□□□□ -0.4
SYNE4-207ENST00000505054 LINC00869P0C866 280 aa12.55□□□□□ -0.4
SYNE4-207ENST00000505054 TFPI2P48307 235 aa12.55□□□□□ -0.4
SYNE4-207ENST00000505054 SELENOTP62341 195 aa12.55□□□□□ -0.4
SYNE4-207ENST00000505054 BAXQ07812 192 aa12.55□□□□□ -0.4
SYNE4-207ENST00000505054 ODF3L2Q3SX64 289 aa12.55□□□□□ -0.4
SYNE4-207ENST00000505054 DEFB125Q8N687 156 aa12.55□□□□□ -0.4
SYNE4-207ENST00000505054 TM2D3Q9BRN9 247 aa12.55□□□□□ -0.4
SYNE4-207ENST00000505054 MS4A6AQ9H2W1 248 aa12.55□□□□□ -0.4
SYNE4-207ENST00000505054 SLC45A2Q9UMX9 530 aa12.55□□□□□ -0.4
SYNE4-207ENST00000505054 A8MZ25 164 aa12.54□□□□□ -0.4
SYNE4-207ENST00000505054 OR11H12B2RN74 326 aa12.54□□□□□ -0.4
SYNE4-207ENST00000505054 ORM2P19652 201 aa12.54□□□□□ -0.4
SYNE4-207ENST00000505054 NUP62P37198 522 aaPredicted RBP12.54□□□□□ -0.4
SYNE4-207ENST00000505054 ATP6V1FQ16864 119 aa12.54□□□□□ -0.4
SYNE4-207ENST00000505054 Q5BKY6 102 aa12.54□□□□□ -0.4
SYNE4-207ENST00000505054 ZFAND6Q6FIF0 208 aa12.54□□□□□ -0.4
SYNE4-207ENST00000505054 ZNF546Q86UE3 836 aa12.54□□□□□ -0.4
SYNE4-207ENST00000505054 OR5C1Q8NGR4 320 aa12.54□□□□□ -0.4
SYNE4-207ENST00000505054 OR1B1Q8NGR6 318 aa12.54□□□□□ -0.4
SYNE4-207ENST00000505054 DOK5Q9P104 306 aa12.54□□□□□ -0.4
SYNE4-207ENST00000505054 CAMLGP49069 296 aa12.53□□□□□ -0.4
SYNE4-207ENST00000505054 PLP1P60201 277 aa12.53□□□□□ -0.4
SYNE4-207ENST00000505054 RPL11P62913 178 aaKnown RBP12.53□□□□□ -0.4
SYNE4-207ENST00000505054 CLINT1Q14677 625 aa12.53□□□□□ -0.4
SYNE4-207ENST00000505054 STXBP6Q8NFX7 210 aa12.53□□□□□ -0.4
SYNE4-207ENST00000505054 ASB13Q8WXK3 278 aa12.53□□□□□ -0.4
SYNE4-207ENST00000505054 GGTLC1Q9BX51 225 aa12.53□□□□□ -0.4
SYNE4-207ENST00000505054 UBQLN2Q9UHD9 624 aa12.53□□□□□ -0.4
SYNE4-207ENST00000505054 HSPB11Q9Y547 144 aa12.53□□□□□ -0.4
SYNE4-207ENST00000505054 TRAV2A0A0B4J234 112 aa12.52□□□□□ -0.41
SYNE4-207ENST00000505054 HELTA6NFD8 242 aa12.52□□□□□ -0.41
SYNE4-207ENST00000505054 RPL12P30050 165 aaKnown RBP12.52□□□□□ -0.41
SYNE4-207ENST00000505054 RAP2BP61225 183 aa12.52□□□□□ -0.41
SYNE4-207ENST00000505054 WFDC3Q8IUB2 231 aa12.52□□□□□ -0.41
SYNE4-207ENST00000505054 FAM24BQ8N5W8 94 aa12.52□□□□□ -0.41
SYNE4-207ENST00000505054 THAP6Q8TBB0 222 aa12.52□□□□□ -0.41
SYNE4-207ENST00000505054 PPP1R14BQ96C90 147 aa12.52□□□□□ -0.41
SYNE4-207ENST00000505054 EDA2RQ9HAV5 297 aa12.52□□□□□ -0.41
SYNE4-207ENST00000505054 PFDN2Q9UHV9 154 aa12.52□□□□□ -0.41
SYNE4-207ENST00000505054 K7EQG2 157 aa12.51□□□□□ -0.41
SYNE4-207ENST00000505054 HYPMO75409 117 aa12.51□□□□□ -0.41
SYNE4-207ENST00000505054 FGF7P21781 194 aa12.51□□□□□ -0.41
SYNE4-207ENST00000505054 PAFAH1B2P68402 229 aa12.51□□□□□ -0.41
SYNE4-207ENST00000505054 PRR20EP86478 221 aa12.51□□□□□ -0.41
SYNE4-207ENST00000505054 PRR20CP86479 221 aa12.51□□□□□ -0.41
SYNE4-207ENST00000505054 PRR20DP86480 221 aa12.51□□□□□ -0.41
SYNE4-207ENST00000505054 PRR20BP86481 221 aa12.51□□□□□ -0.41
SYNE4-207ENST00000505054 PRR20AP86496 221 aa12.51□□□□□ -0.41
SYNE4-207ENST00000505054 C1orf194Q5T5A4 169 aa12.51□□□□□ -0.41
SYNE4-207ENST00000505054 PATE2Q6UY27 113 aa12.51□□□□□ -0.41
SYNE4-207ENST00000505054 SIGLEC15Q6ZMC9 328 aa12.51□□□□□ -0.41
SYNE4-207ENST00000505054 DCANP1Q8TF63 244 aa12.51□□□□□ -0.41
SYNE4-207ENST00000505054 FAM110AQ9BQ89 295 aa12.51□□□□□ -0.41
SYNE4-207ENST00000505054 SCRT1Q9BWW7 348 aa12.51□□□□□ -0.41
SYNE4-207ENST00000505054 ARL6Q9H0F7 186 aa12.51□□□□□ -0.41
SYNE4-207ENST00000505054 TUBA4BQ9H853 241 aa12.51□□□□□ -0.41
SYNE4-207ENST00000505054 SRD5A3Q9H8P0 318 aa12.51□□□□□ -0.41
SYNE4-207ENST00000505054 HIGD1AQ9Y241 93 aa12.51□□□□□ -0.41
SYNE4-207ENST00000505054 ZNF98A6NK75 572 aa12.5□□□□□ -0.41
SYNE4-207ENST00000505054 G3V3Q6 166 aa12.5□□□□□ -0.41
SYNE4-207ENST00000505054 H3BRN7 92 aa12.5□□□□□ -0.41
SYNE4-207ENST00000505054 DNASE2O00115 360 aaPredicted RBP12.5□□□□□ -0.41
SYNE4-207ENST00000505054 RAB31Q13636 194 aa12.5□□□□□ -0.41
SYNE4-207ENST00000505054 OPCMLQ14982 345 aa12.5□□□□□ -0.41
SYNE4-207ENST00000505054 MIC13Q5XKP0 118 aa12.5□□□□□ -0.41
SYNE4-207ENST00000505054 LINC00322Q6ZN03 302 aaPredicted RBP12.5□□□□□ -0.41
SYNE4-207ENST00000505054 CHAC2Q8WUX2 184 aa12.5□□□□□ -0.41
SYNE4-207ENST00000505054 UHRF2Q96PU4 802 aa12.5□□□□□ -0.41
SYNE4-207ENST00000505054 SHANK2-AS3Q9BTD1 123 aa12.5□□□□□ -0.41
SYNE4-207ENST00000505054 SLC25A39Q9BZJ4 359 aaPredicted RBP12.5□□□□□ -0.41
SYNE4-207ENST00000505054 SLC25A32Q9H2D1 315 aa12.5□□□□□ -0.41
SYNE4-207ENST00000505054 MAP6D1Q9H9H5 199 aa12.5□□□□□ -0.41
SYNE4-207ENST00000505054 RBMY1BA6NDE4 496 aaKnown RBP12.49□□□□□ -0.41
SYNE4-207ENST00000505054 RBMY1EA6NEQ0 496 aaKnown RBP12.49□□□□□ -0.41
SYNE4-207ENST00000505054 OR5G3P0C626 314 aa12.49□□□□□ -0.41
SYNE4-207ENST00000505054 RBMY1DP0C7P1 496 aaKnown RBP12.49□□□□□ -0.41
SYNE4-207ENST00000505054 AP2S1P53680 142 aaPredicted RBP12.49□□□□□ -0.41
SYNE4-207ENST00000505054 FGL1Q08830 312 aa12.49□□□□□ -0.41
SYNE4-207ENST00000505054 PXDC1Q5TGL8 231 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms