RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 CECR9P0C854 216 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 FCER1GP30273 86 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 IFI27P40305 119 aaPredicted RBP6.16□□□□□ -1.42
NEDD9-208ENST00000504387 GOLT1AQ6ZVE7 132 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 FA2HQ7L5A8 372 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 UBALD2Q8IYN6 164 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 FAM216BQ8N7L0 139 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 OR2K2Q8NGT1 345 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 IGFBPL1Q8WX77 278 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 HARBI1Q96MB7 349 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 CXXC4Q9H2H0 198 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 ARMS2P0C7Q2 107 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 HIST1H1AQ02539 215 aaPredicted RBP6.16□□□□□ -1.42
NEDD9-208ENST00000504387 PAX2Q02962 417 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 TMEM249Q2WGJ8 235 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 FDCSPQ8NFU4 85 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 SMIM12Q96EX1 92 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 LY96Q9Y6Y9 160 aa6.16□□□□□ -1.42
NEDD9-208ENST00000504387 A8MWL6 223 aa6.15□□□□□ -1.42
NEDD9-208ENST00000504387 LOXL3P58215 753 aa6.15□□□□□ -1.42
NEDD9-208ENST00000504387 SAMD13Q5VXD3 122 aa6.15□□□□□ -1.42
NEDD9-208ENST00000504387 FAM71F2Q6NXP2 309 aa6.15□□□□□ -1.42
NEDD9-208ENST00000504387 C2orf91Q6ZV80 131 aa6.15□□□□□ -1.42
NEDD9-208ENST00000504387 OR1L4Q8NGR5 311 aa6.15□□□□□ -1.42
NEDD9-208ENST00000504387 RPP21Q9H633 154 aaKnown RBP6.15□□□□□ -1.42
NEDD9-208ENST00000504387 AP5S1Q9NUS5 200 aa6.15□□□□□ -1.42
NEDD9-208ENST00000504387 ADAMTS20P59510 1910 aa6.15□□□□□ -1.42
NEDD9-208ENST00000504387 PTPRBP23467 1997 aa6.15□□□□□ -1.42
NEDD9-208ENST00000504387 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.15□□□□□ -1.43
NEDD9-208ENST00000504387 PPIAL4CA0A0B4J2A2 164 aa6.15□□□□□ -1.43
NEDD9-208ENST00000504387 TEX48A0A1B0GUV7 120 aa6.15□□□□□ -1.43
NEDD9-208ENST00000504387 PPIAL4GP0DN37 164 aa6.15□□□□□ -1.43
NEDD9-208ENST00000504387 CCL8P80075 99 aa6.15□□□□□ -1.43
NEDD9-208ENST00000504387 COX19Q49B96 90 aa6.15□□□□□ -1.43
NEDD9-208ENST00000504387 GTF2H5Q6ZYL4 71 aa6.15□□□□□ -1.43
NEDD9-208ENST00000504387 C9orf106Q8NAJ2 232 aa6.15□□□□□ -1.43
NEDD9-208ENST00000504387 TMEM14BQ9NUH8 114 aa6.15□□□□□ -1.43
NEDD9-208ENST00000504387 EPDR1Q9UM22 224 aa6.15□□□□□ -1.43
NEDD9-208ENST00000504387 ZNF257Q9Y2Q1 563 aa6.15□□□□□ -1.43
NEDD9-208ENST00000504387 IGHV3OR16-8A0A075B7F1 116 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 NBEAP1P0C6P0 100 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 CCL3L1P16619 93 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 TMPRSS3P57727 454 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 LYZP61626 148 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 MSMPQ1L6U9 139 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 AMTNQ6UX39 209 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 ZNF788Q6ZQV5 615 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 TPSG1Q9NRR2 321 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 IQCF6A8MYZ5 107 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 LIPFP07098 398 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 RNASE2P10153 161 aaKnown RBP6.14□□□□□ -1.43
NEDD9-208ENST00000504387 AZU1P20160 251 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 PPIFP30405 207 aaKnown RBP6.14□□□□□ -1.43
NEDD9-208ENST00000504387 CD69Q07108 199 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 SH2D6Q7Z4S9 175 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 GCSAMQ8N6F7 178 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 DEFB124Q8NES8 71 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 C17orf77Q96MU5 243 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 GUCD1Q96NT3 240 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 SLC25A10Q9UBX3 287 aaPredicted RBP6.14□□□□□ -1.43
NEDD9-208ENST00000504387 LRBAP50851 2863 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 SLC25A17O43808 307 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 ERHP84090 104 aaKnown RBP6.14□□□□□ -1.43
NEDD9-208ENST00000504387 INO80CQ6PI98 192 aaPredicted RBP6.14□□□□□ -1.43
NEDD9-208ENST00000504387 DEFB104AQ8WTQ1 72 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 MRPL20Q9BYC9 149 aaKnown RBP6.14□□□□□ -1.43
NEDD9-208ENST00000504387 RALYQ9UKM9 306 aaKnown RBP6.14□□□□□ -1.43
NEDD9-208ENST00000504387 PROCRQ9UNN8 238 aa6.14□□□□□ -1.43
NEDD9-208ENST00000504387 TMEM213A2RRL7 107 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.13□□□□□ -1.43
NEDD9-208ENST00000504387 CYC1P08574 325 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 CT45A6P0DMU7 189 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 CT45A5P0DMU8 189 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 CT45A7P0DMV0 189 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 PSG3Q16557 428 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 NRN1LQ496H8 165 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 C16orf54Q6UWD8 224 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 VSTM2AQ8TAG5 236 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 PPP1R35Q8TAP8 253 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 FXYD5Q96DB9 178 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 GPR82Q96P67 336 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 RPUSD1Q9UJJ7 312 aaKnown RBP6.13□□□□□ -1.43
NEDD9-208ENST00000504387 HSPB8Q9UJY1 196 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 M0R296 226 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 UPK2O00526 184 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 MGST3O14880 152 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 WT1-ASQ06250 92 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 KLF5Q13887 457 aaPredicted RBP6.13□□□□□ -1.43
NEDD9-208ENST00000504387 RPRMLQ8N4K4 120 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 ADTRPQ96IZ2 230 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 RITA1Q96K30 269 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 Q9H3A6 140 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 CHODLQ9H9P2 273 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 DKK2Q9UBU2 259 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 JPT1Q9UK76 154 aa6.13□□□□□ -1.43
NEDD9-208ENST00000504387 FOXA2Q9Y261 457 aaPredicted RBP6.13□□□□□ -1.43
NEDD9-208ENST00000504387 AGRNO00468 2067 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 FNDC10F2Z333 226 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 G3V4G9 280 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 M0R3E3 92 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms