RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 ATP5G3P48201 142 aa3.03□□□□□ -1.93
PCDH11X-208ENST00000504220 SMCPP49901 116 aaPredicted RBP3.03□□□□□ -1.93
PCDH11X-208ENST00000504220 SERF2P84101 59 aa3.03□□□□□ -1.93
PCDH11X-208ENST00000504220 RIGQ13278 110 aa3.03□□□□□ -1.93
PCDH11X-208ENST00000504220 ZNF506Q5JVG8 444 aa3.03□□□□□ -1.93
PCDH11X-208ENST00000504220 FAM19A5Q7Z5A7 132 aaPredicted RBP3.03□□□□□ -1.93
PCDH11X-208ENST00000504220 NPIPB3Q92617 1050 aa3.03□□□□□ -1.93
PCDH11X-208ENST00000504220 ZNF501Q96CX3 271 aaPredicted RBP3.03□□□□□ -1.93
PCDH11X-208ENST00000504220 SNRNP40Q96DI7 357 aaKnown RBP3.03□□□□□ -1.93
PCDH11X-208ENST00000504220 SLC25A33Q9BSK2 321 aa3.03□□□□□ -1.93
PCDH11X-208ENST00000504220 C1orf43Q9BWL3 253 aa3.03□□□□□ -1.93
PCDH11X-208ENST00000504220 CXXC4Q9H2H0 198 aa3.03□□□□□ -1.93
PCDH11X-208ENST00000504220 MBNL3Q9NUK0 354 aaKnown RBP3.03□□□□□ -1.93
PCDH11X-208ENST00000504220 TLN1Q9Y490 2541 aaKnown RBP3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 TRBV5-7A0A0A0MS05 114 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 IGHV3-66A0A0C4DH42 116 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 IGHV5-10-1A0A0J9YXX1 117 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 FAM231BA6NCW3 169 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 A6NDN8 102 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 A8MWL6 223 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 LY6LH3BQJ8 138 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 K7EP34 96 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 KBTBD11O94819 623 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 LIFP15018 202 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 IGLL1P15814 213 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 FCGR2BP31994 310 aaPredicted RBP3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 RNPS1Q15287 305 aaKnown RBP3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 PLA2G2CQ5R387 149 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 C1orf100Q5SVJ3 147 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 FAM27BQ5VT28 67 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 SLC25A34Q6PIV7 304 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 HAPLN4Q86UW8 402 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 OR1L8Q8NGR8 309 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 PLPPR1Q8TBJ4 325 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 ITLN1Q8WWA0 313 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 UQCR10Q9UDW1 63 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 DPRXA6NFQ7 191 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 J3QLI3 93 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 K7EN84 100 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 THBDP07204 575 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 FTH1P19P0C7X4 201 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 FGF6P10767 208 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 MPV17P39210 176 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 ROM1Q03395 351 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 Q0VG73 95 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 IL11RAQ14626 422 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 C8orf86Q6ZUL3 223 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 GOLT1AQ6ZVE7 132 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 POC1AQ8NBT0 407 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 MYOZ3Q8TDC0 251 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 FOXC2Q99958 501 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 FAM206AQ9NX38 181 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 MDFICQ9P1T7 246 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 CDC42EP3Q9UKI2 254 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 RAXQ9Y2V3 346 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 USP9XQ93008 2570 aaPredicted RBP3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 IGHV3OR16-10A0A075B7F0 116 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 A0A1W2PPI3 338 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 PSMB11A5LHX3 300 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 RS1O15537 224 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 CRLF1O75462 422 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 CA1P00915 261 aaPredicted RBP3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 IGHV3-23P01764 117 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 TFF3Q07654 80 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 TMEM187Q14656 261 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 RPL39P5Q59GN2 51 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 ZC2HC1BQ5TFG8 222 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 FAM74A4Q5TZK3 123 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 ZNF441Q8N8Z8 693 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 OR52E5Q8NH55 327 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 GATAD1Q8WUU5 269 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 TMEM54Q969K7 222 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 HIST1H4GQ99525 98 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 C20orf78Q9BR46 151 aa3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 AMMECR1Q9Y4X0 333 aaPredicted RBP3.02□□□□□ -1.93
PCDH11X-208ENST00000504220 IGKV1D-8A0A087WSZ0 117 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 A0A0G2JLM5 398 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 A0A1W2PQD3 144 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 TMEM14DPA8MWL7 114 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 NKX2-8O15522 239 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 NAPSAO96009 420 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 RFPL3SP0C7P2 107 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 FABP2P12104 132 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 FGF12P61328 243 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 LY6DQ14210 128 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 GGTLC2Q14390 218 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 LRRC75BQ2VPJ9 315 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 CENPWQ5EE01 88 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 RNF144BQ7Z419 303 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 ZCCHC24Q8N2G6 241 aaKnown RBP3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 DRAM1Q8N682 238 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 OR4B1Q8NGF8 309 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 AICDAQ9GZX7 198 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 C16orf95Q9H693 158 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 RNF7Q9UBF6 113 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 TCF19Q9Y242 345 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 SOX21Q9Y651 276 aaPredicted RBP3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 SCO2A0A1W2PP80 73 aa3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 SH2D7A6NKC9 451 aaPredicted RBP3.01□□□□□ -1.93
PCDH11X-208ENST00000504220 EPM2AB3EWF7 344 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms