RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 OR1B1Q8NGR6 318 aa8.36□□□□□ -1.07
VCAN-205ENST00000503923 CHAC2Q8WUX2 184 aa8.36□□□□□ -1.07
VCAN-205ENST00000503923 PPP1R14BQ96C90 147 aa8.36□□□□□ -1.07
VCAN-205ENST00000503923 ATP5SQ99766 215 aa8.36□□□□□ -1.07
VCAN-205ENST00000503923 HELTA6NFD8 242 aa8.35□□□□□ -1.07
VCAN-205ENST00000503923 OR4C46A6NHA9 309 aa8.35□□□□□ -1.07
VCAN-205ENST00000503923 HYPMO75409 117 aa8.35□□□□□ -1.07
VCAN-205ENST00000503923 AP2S1P53680 142 aaPredicted RBP8.35□□□□□ -1.07
VCAN-205ENST00000503923 CD81P60033 236 aa8.35□□□□□ -1.07
VCAN-205ENST00000503923 RPL11P62913 178 aaKnown RBP8.35□□□□□ -1.07
VCAN-205ENST00000503923 OPCMLQ14982 345 aa8.35□□□□□ -1.07
VCAN-205ENST00000503923 C1orf194Q5T5A4 169 aa8.35□□□□□ -1.07
VCAN-205ENST00000503923 S100A7AQ86SG5 101 aa8.35□□□□□ -1.07
VCAN-205ENST00000503923 GLMPQ8WWB7 406 aa8.35□□□□□ -1.07
VCAN-205ENST00000503923 AQP10Q96PS8 301 aa8.35□□□□□ -1.07
VCAN-205ENST00000503923 NEURL2Q9BR09 285 aa8.35□□□□□ -1.07
VCAN-205ENST00000503923 GGTLC1Q9BX51 225 aa8.35□□□□□ -1.07
VCAN-205ENST00000503923 SMAD5-AS1Q9Y6J3 95 aa8.35□□□□□ -1.07
VCAN-205ENST00000503923 IGKV3-7A0A075B6H7 116 aa8.34□□□□□ -1.07
VCAN-205ENST00000503923 FXYD6-FXYD2A0A087WZ82 144 aa8.34□□□□□ -1.07
VCAN-205ENST00000503923 TRAV2A0A0B4J234 112 aa8.34□□□□□ -1.07
VCAN-205ENST00000503923 CD7P09564 240 aa8.34□□□□□ -1.07
VCAN-205ENST00000503923 RPL29P47914 159 aaKnown RBP8.34□□□□□ -1.07
VCAN-205ENST00000503923 PRR20EP86478 221 aa8.34□□□□□ -1.07
VCAN-205ENST00000503923 PRR20CP86479 221 aa8.34□□□□□ -1.07
VCAN-205ENST00000503923 PRR20DP86480 221 aa8.34□□□□□ -1.07
VCAN-205ENST00000503923 PRR20BP86481 221 aa8.34□□□□□ -1.07
VCAN-205ENST00000503923 PRR20AP86496 221 aa8.34□□□□□ -1.07
VCAN-205ENST00000503923 DEFB121Q5J5C9 76 aa8.34□□□□□ -1.07
VCAN-205ENST00000503923 Q6ZRG5 221 aa8.34□□□□□ -1.07
VCAN-205ENST00000503923 Q8N1Y9 231 aa8.34□□□□□ -1.07
VCAN-205ENST00000503923 STPG3Q8N7X2 389 aa8.34□□□□□ -1.07
VCAN-205ENST00000503923 INO80EQ8NBZ0 244 aaPredicted RBP8.34□□□□□ -1.07
VCAN-205ENST00000503923 NPCDR1Q9BY65 106 aa8.34□□□□□ -1.07
VCAN-205ENST00000503923 SMIM3Q9BZL3 60 aa8.34□□□□□ -1.07
VCAN-205ENST00000503923 WDR61Q9GZS3 305 aaKnown RBP8.34□□□□□ -1.07
VCAN-205ENST00000503923 ARL6Q9H0F7 186 aa8.34□□□□□ -1.07
VCAN-205ENST00000503923 MS4A6AQ9H2W1 248 aa8.34□□□□□ -1.07
VCAN-205ENST00000503923 DOK5Q9P104 306 aa8.34□□□□□ -1.07
VCAN-205ENST00000503923 FBXL17Q9UF56 701 aa8.34□□□□□ -1.07
VCAN-205ENST00000503923 HIGD1AQ9Y241 93 aa8.34□□□□□ -1.07
VCAN-205ENST00000503923 ZNF98A6NK75 572 aa8.33□□□□□ -1.08
VCAN-205ENST00000503923 G3V3Q6 166 aa8.33□□□□□ -1.08
VCAN-205ENST00000503923 H3BRN7 92 aa8.33□□□□□ -1.08
VCAN-205ENST00000503923 DNASE2O00115 360 aaPredicted RBP8.33□□□□□ -1.08
VCAN-205ENST00000503923 IFNA5P01569 189 aa8.33□□□□□ -1.08
VCAN-205ENST00000503923 OR5G3P0C626 314 aa8.33□□□□□ -1.08
VCAN-205ENST00000503923 TFPI2P48307 235 aa8.33□□□□□ -1.08
VCAN-205ENST00000503923 B2MP61769 119 aa8.33□□□□□ -1.08
VCAN-205ENST00000503923 MIC13Q5XKP0 118 aa8.33□□□□□ -1.08
VCAN-205ENST00000503923 SIGLEC15Q6ZMC9 328 aa8.33□□□□□ -1.08
VCAN-205ENST00000503923 OR8I2Q8N0Y5 310 aa8.33□□□□□ -1.08
VCAN-205ENST00000503923 GBGT1Q8N5D6 347 aa8.33□□□□□ -1.08
VCAN-205ENST00000503923 SLC25A39Q9BZJ4 359 aaPredicted RBP8.33□□□□□ -1.08
VCAN-205ENST00000503923 KCNIP2Q9NS61 270 aa8.33□□□□□ -1.08
VCAN-205ENST00000503923 SLC39A9Q9NUM3 307 aa8.33□□□□□ -1.08
VCAN-205ENST00000503923 TNFSF18Q9UNG2 199 aa8.33□□□□□ -1.08
VCAN-205ENST00000503923 RNF24Q9Y225 148 aa8.33□□□□□ -1.08
VCAN-205ENST00000503923 PXMP4Q9Y6I8 212 aa8.33□□□□□ -1.08
VCAN-205ENST00000503923 ELOA3CA0A087WX78 387 aaPredicted RBP8.32□□□□□ -1.08
VCAN-205ENST00000503923 C17orf112F2Z3M2 114 aa8.32□□□□□ -1.08
VCAN-205ENST00000503923 COX7A2P2O60397 106 aa8.32□□□□□ -1.08
VCAN-205ENST00000503923 CMC4P56277 68 aaPredicted RBP8.32□□□□□ -1.08
VCAN-205ENST00000503923 PATE2Q6UY27 113 aa8.32□□□□□ -1.08
VCAN-205ENST00000503923 WFDC3Q8IUB2 231 aa8.32□□□□□ -1.08
VCAN-205ENST00000503923 ZNF709Q8N972 641 aa8.32□□□□□ -1.08
VCAN-205ENST00000503923 STXBP6Q8NFX7 210 aa8.32□□□□□ -1.08
VCAN-205ENST00000503923 OR1L4Q8NGR5 311 aa8.32□□□□□ -1.08
VCAN-205ENST00000503923 SCGB1C1Q8TD33 95 aa8.32□□□□□ -1.08
VCAN-205ENST00000503923 PFDN5Q99471 154 aa8.32□□□□□ -1.08
VCAN-205ENST00000503923 FAM110AQ9BQ89 295 aa8.32□□□□□ -1.08
VCAN-205ENST00000503923 SHANK2-AS3Q9BTD1 123 aa8.32□□□□□ -1.08
VCAN-205ENST00000503923 PARD6GQ9BYG4 376 aaPredicted RBP8.32□□□□□ -1.08
VCAN-205ENST00000503923 ARV1Q9H2C2 271 aa8.32□□□□□ -1.08
VCAN-205ENST00000503923 SLC25A22Q9H936 323 aa8.32□□□□□ -1.08
VCAN-205ENST00000503923 PRKDCP78527 4128 aaKnown RBP8.32□□□□□ -1.08
VCAN-205ENST00000503923 RNF222A6NCQ9 220 aa8.31□□□□□ -1.08
VCAN-205ENST00000503923 A8MZ25 164 aa8.31□□□□□ -1.08
VCAN-205ENST00000503923 OR11H12B2RN74 326 aa8.31□□□□□ -1.08
VCAN-205ENST00000503923 SMLR1H3BR10 107 aa8.31□□□□□ -1.08
VCAN-205ENST00000503923 IGHV4-30-4P0DP06 118 aa8.31□□□□□ -1.08
VCAN-205ENST00000503923 GALR1P47211 349 aa8.31□□□□□ -1.08
VCAN-205ENST00000503923 ZNF266Q14584 549 aa8.31□□□□□ -1.08
VCAN-205ENST00000503923 C10orf113Q5VZT2 155 aa8.31□□□□□ -1.08
VCAN-205ENST00000503923 LINC00305Q7Z4B0 112 aa8.31□□□□□ -1.08
VCAN-205ENST00000503923 TMEM37Q8WXS4 190 aa8.31□□□□□ -1.08
VCAN-205ENST00000503923 GPR82Q96P67 336 aa8.31□□□□□ -1.08
VCAN-205ENST00000503923 UHRF2Q96PU4 802 aa8.31□□□□□ -1.08
VCAN-205ENST00000503923 SCRT1Q9BWW7 348 aa8.31□□□□□ -1.08
VCAN-205ENST00000503923 SLC25A32Q9H2D1 315 aa8.31□□□□□ -1.08
VCAN-205ENST00000503923 WFDC1Q9HC57 220 aa8.31□□□□□ -1.08
VCAN-205ENST00000503923 DNAJC4Q9NNZ3 241 aa8.31□□□□□ -1.08
VCAN-205ENST00000503923 NRN1Q9NPD7 142 aa8.31□□□□□ -1.08
VCAN-205ENST00000503923 C19orf73Q9NVV2 129 aa8.31□□□□□ -1.08
VCAN-205ENST00000503923 hCG_2014768A0A024R1R8 64 aa8.3□□□□□ -1.08
VCAN-205ENST00000503923 K7EQG2 157 aa8.3□□□□□ -1.08
VCAN-205ENST00000503923 ARPC5O15511 151 aa8.3□□□□□ -1.08
VCAN-205ENST00000503923 ODF3L2Q3SX64 289 aa8.3□□□□□ -1.08
VCAN-205ENST00000503923 DEFB125Q8N687 156 aa8.3□□□□□ -1.08
VCAN-205ENST00000503923 DCANP1Q8TF63 244 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms