RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 C19orf54Q5BKX5 351 aa20.38■□□□□ 0.85
HOXB3-212ENST00000498678 OR1B1Q8NGR6 318 aa20.38■□□□□ 0.85
HOXB3-212ENST00000498678 FOXC2Q99958 501 aa20.38■□□□□ 0.85
HOXB3-212ENST00000498678 C7orf77A4D0Y5 90 aa20.38■□□□□ 0.85
HOXB3-212ENST00000498678 IGHV4-59P01825 116 aa20.38■□□□□ 0.85
HOXB3-212ENST00000498678 OR4F5Q8NH21 305 aa20.38■□□□□ 0.85
HOXB3-212ENST00000498678 OR4F4Q96R69 305 aa20.38■□□□□ 0.85
HOXB3-212ENST00000498678 SLC25A2Q9BXI2 301 aa20.38■□□□□ 0.85
HOXB3-212ENST00000498678 TRBV9A0A0B4J1U6 114 aa20.37■□□□□ 0.85
HOXB3-212ENST00000498678 C11orf94C9JXX5 98 aa20.37■□□□□ 0.85
HOXB3-212ENST00000498678 IER3P46695 156 aa20.37■□□□□ 0.85
HOXB3-212ENST00000498678 ZNF355PQ9NSJ1 428 aa20.37■□□□□ 0.85
HOXB3-212ENST00000498678 TRAV41A0A0B4J266 112 aa20.36■□□□□ 0.85
HOXB3-212ENST00000498678 IGHG2P01859 326 aa20.36■□□□□ 0.85
HOXB3-212ENST00000498678 BLCAPP62952 87 aa20.36■□□□□ 0.85
HOXB3-212ENST00000498678 CST9LP1Q5W188 147 aa20.36■□□□□ 0.85
HOXB3-212ENST00000498678 LINC00305Q7Z4B0 112 aa20.36■□□□□ 0.85
HOXB3-212ENST00000498678 PUS1Q9Y606 427 aaKnown RBP eCLIP20.36■□□□□ 0.85
HOXB3-212ENST00000498678 TRAV30A0A087WSZ9 112 aa20.36■□□□□ 0.85
HOXB3-212ENST00000498678 TMEM238LA0A1B0GVL6 79 aa20.36■□□□□ 0.85
HOXB3-212ENST00000498678 SMAD7O15105 426 aaKnown RBP20.36■□□□□ 0.85
HOXB3-212ENST00000498678 DLEU1O43261 78 aa20.36■□□□□ 0.85
HOXB3-212ENST00000498678 GNG7O60262 68 aa20.36■□□□□ 0.85
HOXB3-212ENST00000498678 OR7C2O60412 319 aa20.36■□□□□ 0.85
HOXB3-212ENST00000498678 HYPMO75409 117 aa20.36■□□□□ 0.85
HOXB3-212ENST00000498678 RHEBQ15382 184 aa20.36■□□□□ 0.85
HOXB3-212ENST00000498678 TMEM250H0YL14 139 aa20.35■□□□□ 0.85
HOXB3-212ENST00000498678 IGHV3-23P01764 117 aa20.35■□□□□ 0.85
HOXB3-212ENST00000498678 IGF1P05019 195 aa20.35■□□□□ 0.85
HOXB3-212ENST00000498678 ATP5G3P48201 142 aa20.35■□□□□ 0.85
HOXB3-212ENST00000498678 LINC00527Q9UJ94 153 aa20.35■□□□□ 0.85
HOXB3-212ENST00000498678 YTHDF2Q9Y5A9 579 aaKnown RBP20.35■□□□□ 0.85
HOXB3-212ENST00000498678 H3BQ15 152 aa20.35■□□□□ 0.85
HOXB3-212ENST00000498678 RHOGP84095 191 aa20.35■□□□□ 0.85
HOXB3-212ENST00000498678 Q56UQ5 140 aa20.35■□□□□ 0.85
HOXB3-212ENST00000498678 OR5AU1Q8NGC0 362 aa20.35■□□□□ 0.85
HOXB3-212ENST00000498678 VN1R17PQ8TDU5 208 aa20.35■□□□□ 0.85
HOXB3-212ENST00000498678 PRO1933Q9H354 126 aa20.35■□□□□ 0.85
HOXB3-212ENST00000498678 TMEM167BQ9NRX6 74 aa20.35■□□□□ 0.85
HOXB3-212ENST00000498678 G0S2P27469 103 aa20.34■□□□□ 0.85
HOXB3-212ENST00000498678 C15orf32Q32M92 178 aa20.34■□□□□ 0.85
HOXB3-212ENST00000498678 UNC79Q9P2D8 2635 aa20.34■□□□□ 0.85
HOXB3-212ENST00000498678 TOMM40O96008 361 aa20.34■□□□□ 0.85
HOXB3-212ENST00000498678 NDUFA6P56556 154 aa20.34■□□□□ 0.85
HOXB3-212ENST00000498678 LYZP61626 148 aa20.34■□□□□ 0.85
HOXB3-212ENST00000498678 Q6ZS46 218 aa20.34■□□□□ 0.85
HOXB3-212ENST00000498678 ITPR3Q14573 2671 aa20.33■□□□□ 0.85
HOXB3-212ENST00000498678 OR10J4P0C629 311 aa20.33■□□□□ 0.85
HOXB3-212ENST00000498678 ZNF25P17030 456 aaPredicted RBP20.33■□□□□ 0.85
HOXB3-212ENST00000498678 YPEL3P61236 119 aaPredicted RBP20.33■□□□□ 0.85
HOXB3-212ENST00000498678 AWAT1Q58HT5 328 aa20.33■□□□□ 0.85
HOXB3-212ENST00000498678 TXN2Q99757 166 aa20.33■□□□□ 0.85
HOXB3-212ENST00000498678 TXNDC17Q9BRA2 123 aa20.33■□□□□ 0.85
HOXB3-212ENST00000498678 C20orf24Q9BUV8 137 aa20.33■□□□□ 0.85
HOXB3-212ENST00000498678 FCGR2BP31994 310 aaPredicted RBP20.32■□□□□ 0.84
HOXB3-212ENST00000498678 NECAP1Q8NC96 275 aa20.32■□□□□ 0.84
HOXB3-212ENST00000498678 OR51G1Q8NGK1 321 aa20.32■□□□□ 0.84
HOXB3-212ENST00000498678 NIPSNAP3BQ9BS92 247 aa20.32■□□□□ 0.84
HOXB3-212ENST00000498678 M0R036 132 aa20.32■□□□□ 0.84
HOXB3-212ENST00000498678 Q6YL49 198 aa20.32■□□□□ 0.84
HOXB3-212ENST00000498678 FAM24BQ8N5W8 94 aa20.32■□□□□ 0.84
HOXB3-212ENST00000498678 MS4A10Q96PG2 267 aa20.32■□□□□ 0.84
HOXB3-212ENST00000498678 PDE6DO43924 150 aa20.31■□□□□ 0.84
HOXB3-212ENST00000498678 NPPCP23582 126 aa20.31■□□□□ 0.84
HOXB3-212ENST00000498678 HIGD1AQ9Y241 93 aa20.31■□□□□ 0.84
HOXB3-212ENST00000498678 CCDC168Q8NDH2 2452 aa20.31■□□□□ 0.84
HOXB3-212ENST00000498678 ZNF469Q96JG9 3925 aaPredicted RBP20.31■□□□□ 0.84
HOXB3-212ENST00000498678 OR2T8A6NH00 312 aa20.31■□□□□ 0.84
HOXB3-212ENST00000498678 PPP1R2P9O14990 202 aa20.31■□□□□ 0.84
HOXB3-212ENST00000498678 ZNF491Q8N8L2 437 aa20.31■□□□□ 0.84
HOXB3-212ENST00000498678 ZNF502Q8TBZ5 544 aa20.31■□□□□ 0.84
HOXB3-212ENST00000498678 MRPL27Q9P0M9 148 aaKnown RBP20.31■□□□□ 0.84
HOXB3-212ENST00000498678 TEX15Q9BXT5 2789 aa20.3■□□□□ 0.84
HOXB3-212ENST00000498678 PAXXQ9BUH6 204 aa20.3■□□□□ 0.84
HOXB3-212ENST00000498678 ARL2-SNX15V9GYD0 113 aa20.3■□□□□ 0.84
HOXB3-212ENST00000498678 ITPR2Q14571 2701 aa20.3■□□□□ 0.84
HOXB3-212ENST00000498678 CTSGP08311 255 aa20.29■□□□□ 0.84
HOXB3-212ENST00000498678 PYYP10082 97 aa20.29■□□□□ 0.84
HOXB3-212ENST00000498678 HIST3H2BBQ8N257 126 aa20.29■□□□□ 0.84
HOXB3-212ENST00000498678 RPUSD4Q96CM3 377 aaKnown RBP20.29■□□□□ 0.84
HOXB3-212ENST00000498678 YPEL4Q96NS1 127 aa20.29■□□□□ 0.84
HOXB3-212ENST00000498678 WI2-2373I1.2A0A1W2PRP0 233 aa20.29■□□□□ 0.84
HOXB3-212ENST00000498678 ZNF727A8MUV8 499 aa20.29■□□□□ 0.84
HOXB3-212ENST00000498678 MRPL52Q86TS9 123 aaKnown RBP20.29■□□□□ 0.84
HOXB3-212ENST00000498678 TVP23CQ96ET8 276 aa20.29■□□□□ 0.84
HOXB3-212ENST00000498678 PARLQ9H300 379 aa20.29■□□□□ 0.84
HOXB3-212ENST00000498678 PPIFP30405 207 aaKnown RBP20.28■□□□□ 0.84
HOXB3-212ENST00000498678 UBE2L3P68036 154 aaKnown RBP20.28■□□□□ 0.84
HOXB3-212ENST00000498678 ISOC2Q96AB3 205 aa20.28■□□□□ 0.84
HOXB3-212ENST00000498678 CHTOPQ9Y3Y2 248 aaKnown RBP20.28■□□□□ 0.84
HOXB3-212ENST00000498678 F6UZH7 168 aa20.28■□□□□ 0.84
HOXB3-212ENST00000498678 ZNF674Q2M3X9 581 aa20.28■□□□□ 0.84
HOXB3-212ENST00000498678 RNF125Q96EQ8 232 aa20.28■□□□□ 0.84
HOXB3-212ENST00000498678 SMIM7Q9BQ49 75 aa20.28■□□□□ 0.84
HOXB3-212ENST00000498678 SLC25A39Q9BZJ4 359 aaPredicted RBP20.28■□□□□ 0.84
HOXB3-212ENST00000498678 GGCTO75223 188 aaKnown RBP20.27■□□□□ 0.84
HOXB3-212ENST00000498678 IL4P05112 153 aa20.27■□□□□ 0.84
HOXB3-212ENST00000498678 ADMP35318 185 aa20.27■□□□□ 0.84
HOXB3-212ENST00000498678 AKR1C3P42330 323 aa20.27■□□□□ 0.84
HOXB3-212ENST00000498678 Q8WTZ3 238 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms