RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 S100A7AQ86SG5 101 aa8.7□□□□□ -1.02
CTTN-208ENST00000498223 STPG3Q8N7X2 389 aa8.7□□□□□ -1.02
CTTN-208ENST00000498223 HSD17B11Q8NBQ5 300 aa8.7□□□□□ -1.02
CTTN-208ENST00000498223 RSG1Q9BU20 258 aa8.7□□□□□ -1.02
CTTN-208ENST00000498223 SMPXQ9UHP9 88 aa8.7□□□□□ -1.02
CTTN-208ENST00000498223 HIGD1AQ9Y241 93 aa8.7□□□□□ -1.02
CTTN-208ENST00000498223 NOTCH1P46531 2555 aa8.7□□□□□ -1.02
CTTN-208ENST00000498223 SORL1Q92673 2214 aa8.69□□□□□ -1.02
CTTN-208ENST00000498223 C4BPBP20851 252 aa8.69□□□□□ -1.02
CTTN-208ENST00000498223 RPL11P62913 178 aaKnown RBP8.69□□□□□ -1.02
CTTN-208ENST00000498223 OXLD1Q5BKU9 147 aa8.69□□□□□ -1.02
CTTN-208ENST00000498223 PXDC1Q5TGL8 231 aa8.69□□□□□ -1.02
CTTN-208ENST00000498223 C10orf113Q5VZT2 155 aa8.69□□□□□ -1.02
CTTN-208ENST00000498223 IL34Q6ZMJ4 242 aa8.69□□□□□ -1.02
CTTN-208ENST00000498223 OR1L4Q8NGR5 311 aa8.69□□□□□ -1.02
CTTN-208ENST00000498223 ST8SIA2Q92186 375 aa8.69□□□□□ -1.02
CTTN-208ENST00000498223 ZNF414Q96IQ9 312 aa8.69□□□□□ -1.02
CTTN-208ENST00000498223 RHPN1-AS1Q9BWJ2 59 aa8.69□□□□□ -1.02
CTTN-208ENST00000498223 ZNF471Q9BX82 626 aaPredicted RBP8.69□□□□□ -1.02
CTTN-208ENST00000498223 PARD6GQ9BYG4 376 aaPredicted RBP8.69□□□□□ -1.02
CTTN-208ENST00000498223 SLC39A9Q9NUM3 307 aa8.69□□□□□ -1.02
CTTN-208ENST00000498223 VWFP04275 2813 aa8.69□□□□□ -1.02
CTTN-208ENST00000498223 CHEK1O14757 476 aa8.68□□□□□ -1.02
CTTN-208ENST00000498223 BCL2L11O43521 198 aa8.68□□□□□ -1.02
CTTN-208ENST00000498223 JTBO76095 146 aa8.68□□□□□ -1.02
CTTN-208ENST00000498223 APOHP02749 345 aaPredicted RBP8.68□□□□□ -1.02
CTTN-208ENST00000498223 CRYBB3P26998 211 aa8.68□□□□□ -1.02
CTTN-208ENST00000498223 LGALSLQ3ZCW2 172 aaPredicted RBP8.68□□□□□ -1.02
CTTN-208ENST00000498223 FFAR4Q5NUL3 377 aa8.68□□□□□ -1.02
CTTN-208ENST00000498223 LAMTOR1Q6IAA8 161 aa8.68□□□□□ -1.02
CTTN-208ENST00000498223 RBPMS2Q6ZRY4 209 aaKnown RBP8.68□□□□□ -1.02
CTTN-208ENST00000498223 PFDN5Q99471 154 aa8.68□□□□□ -1.02
CTTN-208ENST00000498223 SLC25A22Q9H936 323 aa8.68□□□□□ -1.02
CTTN-208ENST00000498223 TECRQ9NZ01 308 aaKnown RBP8.68□□□□□ -1.02
CTTN-208ENST00000498223 MLXQ9UH92 298 aa8.68□□□□□ -1.02
CTTN-208ENST00000498223 IGKV3-7A0A075B6H7 116 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 ELOA3CA0A087WX78 387 aaPredicted RBP8.67□□□□□ -1.02
CTTN-208ENST00000498223 C8orf88P0DMB2 117 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 ATP6V0CP27449 155 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 NKX2-5P52952 324 aaPredicted RBP8.67□□□□□ -1.02
CTTN-208ENST00000498223 PLP1P60201 277 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 EIF5AP63241 154 aaKnown RBP8.67□□□□□ -1.02
CTTN-208ENST00000498223 PRR20EP86478 221 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 PRR20CP86479 221 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 PRR20DP86480 221 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 PRR20BP86481 221 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 PRR20AP86496 221 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 GUCA2BQ16661 112 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 DEFB114Q30KQ6 69 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 LCN12Q6JVE5 192 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 ADAMTSL5Q6ZMM2 481 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 TCF24Q7RTU0 167 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 LINC00305Q7Z4B0 112 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 OR8I2Q8N0Y5 310 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 GNPNAT1Q96EK6 184 aaPredicted RBP8.67□□□□□ -1.02
CTTN-208ENST00000498223 UHRF2Q96PU4 802 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 ARV1Q9H2C2 271 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 DNAJC4Q9NNZ3 241 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 SIGLEC8Q9NYZ4 499 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 TIMM9Q9Y5J7 89 aa8.67□□□□□ -1.02
CTTN-208ENST00000498223 NOTCH3Q9UM47 2321 aa8.66□□□□□ -1.02
CTTN-208ENST00000498223 CMYA5Q8N3K9 4069 aa8.66□□□□□ -1.02
CTTN-208ENST00000498223 G3V4G9 280 aa8.66□□□□□ -1.02
CTTN-208ENST00000498223 ACOT6Q3I5F7 207 aaPredicted RBP8.66□□□□□ -1.02
CTTN-208ENST00000498223 CD300EQ496F6 205 aaPredicted RBP8.66□□□□□ -1.02
CTTN-208ENST00000498223 LEMD1Q68G75 181 aa8.66□□□□□ -1.02
CTTN-208ENST00000498223 RNF2Q99496 336 aa8.66□□□□□ -1.02
CTTN-208ENST00000498223 SLC25A39Q9BZJ4 359 aaPredicted RBP8.66□□□□□ -1.02
CTTN-208ENST00000498223 CYTL1Q9NRR1 136 aa8.66□□□□□ -1.02
CTTN-208ENST00000498223 RNF24Q9Y225 148 aa8.66□□□□□ -1.02
CTTN-208ENST00000498223 RFNGQ9Y644 331 aa8.66□□□□□ -1.02
CTTN-208ENST00000498223 TGP01266 2768 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 HELTA6NFD8 242 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 ZNF98A6NK75 572 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 DNASE2O00115 360 aaPredicted RBP8.65□□□□□ -1.02
CTTN-208ENST00000498223 IGLV1-51P01701 117 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 CD5P06127 495 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 TFPI2P48307 235 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 PAFAH1B2P68402 229 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 GCSAMLQ5JQS6 135 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 FAM78BQ5VT40 261 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 C16orf54Q6UWD8 224 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 PATE2Q6UY27 113 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 SIGLEC15Q6ZMC9 328 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 WFDC3Q8IUB2 231 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 C9orf62Q8N4C0 152 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 GBGT1Q8N5D6 347 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 STXBP6Q8NFX7 210 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 OR2K2Q8NGT1 345 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 OR2G3Q8NGZ4 309 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 GATAD1Q8WUU5 269 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 PSMG3Q9BT73 122 aaPredicted RBP8.65□□□□□ -1.02
CTTN-208ENST00000498223 SHANK2-AS3Q9BTD1 123 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 SCRT1Q9BWW7 348 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 SH3BGRL3Q9H299 93 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 SLC25A32Q9H2D1 315 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 VSIRQ9H7M9 311 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 ZMAT5Q9UDW3 170 aaKnown RBP8.65□□□□□ -1.02
CTTN-208ENST00000498223 U3KQE9 123 aa8.65□□□□□ -1.02
CTTN-208ENST00000498223 A0A1W2PPV4 95 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms