RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 TEPPQ6URK8 271 aa11.41□□□□□ -0.58
NUP50-219ENST00000497960 TMEM231Q9H6L2 316 aa11.41□□□□□ -0.58
NUP50-219ENST00000497960 ZFAND3Q9H8U3 227 aa11.41□□□□□ -0.58
NUP50-219ENST00000497960 NBEAL2Q6ZNJ1 2754 aa11.41□□□□□ -0.58
NUP50-219ENST00000497960 IGKV3-7A0A075B6H7 116 aa11.4□□□□□ -0.58
NUP50-219ENST00000497960 A0A1W2PS18 150 aa11.4□□□□□ -0.58
NUP50-219ENST00000497960 SMLR1H3BR10 107 aa11.4□□□□□ -0.58
NUP50-219ENST00000497960 RD3LP0DJH9 198 aa11.4□□□□□ -0.58
NUP50-219ENST00000497960 PSG1P11464 419 aa11.4□□□□□ -0.58
NUP50-219ENST00000497960 NPPCP23582 126 aa11.4□□□□□ -0.58
NUP50-219ENST00000497960 TFPI2P48307 235 aa11.4□□□□□ -0.58
NUP50-219ENST00000497960 APOC4P55056 127 aa11.4□□□□□ -0.58
NUP50-219ENST00000497960 LYZP61626 148 aa11.4□□□□□ -0.58
NUP50-219ENST00000497960 OR2F1Q13607 317 aa11.4□□□□□ -0.58
NUP50-219ENST00000497960 ODF3L2Q3SX64 289 aa11.4□□□□□ -0.58
NUP50-219ENST00000497960 CYP2G1PQ6ZSU1 146 aa11.4□□□□□ -0.58
NUP50-219ENST00000497960 TCF24Q7RTU0 167 aa11.4□□□□□ -0.58
NUP50-219ENST00000497960 OR51G1Q8NGK1 321 aa11.4□□□□□ -0.58
NUP50-219ENST00000497960 METTL26Q96S19 204 aa11.4□□□□□ -0.58
NUP50-219ENST00000497960 PBDC1Q9BVG4 233 aa11.4□□□□□ -0.58
NUP50-219ENST00000497960 SMIM3Q9BZL3 60 aa11.4□□□□□ -0.58
NUP50-219ENST00000497960 VWC2Q2TAL6 325 aa11.39□□□□□ -0.59
NUP50-219ENST00000497960 FAM90A2PQ658T7 463 aa11.39□□□□□ -0.59
NUP50-219ENST00000497960 GBGT1Q8N5D6 347 aa11.39□□□□□ -0.59
NUP50-219ENST00000497960 INO80EQ8NBZ0 244 aaPredicted RBP11.39□□□□□ -0.59
NUP50-219ENST00000497960 BPIFCQ8NFQ6 507 aa11.39□□□□□ -0.59
NUP50-219ENST00000497960 ST8SIA2Q92186 375 aa11.39□□□□□ -0.59
NUP50-219ENST00000497960 RNF125Q96EQ8 232 aa11.39□□□□□ -0.59
NUP50-219ENST00000497960 NARS2Q96I59 477 aaKnown RBP11.39□□□□□ -0.59
NUP50-219ENST00000497960 ATP5SQ99766 215 aa11.39□□□□□ -0.59
NUP50-219ENST00000497960 VSIRQ9H7M9 311 aa11.39□□□□□ -0.59
NUP50-219ENST00000497960 IGHV3-66A0A0C4DH42 116 aa11.38□□□□□ -0.59
NUP50-219ENST00000497960 A0A1B0GVG6 124 aa11.38□□□□□ -0.59
NUP50-219ENST00000497960 G3V3Q6 166 aa11.38□□□□□ -0.59
NUP50-219ENST00000497960 DNASE2O00115 360 aaPredicted RBP11.38□□□□□ -0.59
NUP50-219ENST00000497960 FGF7P21781 194 aa11.38□□□□□ -0.59
NUP50-219ENST00000497960 RPL11P62913 178 aaKnown RBP11.38□□□□□ -0.59
NUP50-219ENST00000497960 RAB31Q13636 194 aa11.38□□□□□ -0.59
NUP50-219ENST00000497960 ZFAND6Q6FIF0 208 aa11.38□□□□□ -0.59
NUP50-219ENST00000497960 ZNF546Q86UE3 836 aa11.38□□□□□ -0.59
NUP50-219ENST00000497960 AKAP14Q86UN6 197 aa11.38□□□□□ -0.59
NUP50-219ENST00000497960 IL17DQ8TAD2 202 aa11.38□□□□□ -0.59
NUP50-219ENST00000497960 AQP10Q96PS8 301 aa11.38□□□□□ -0.59
NUP50-219ENST00000497960 UBE2CO00762 179 aa11.37□□□□□ -0.59
NUP50-219ENST00000497960 AGPAT2O15120 278 aa11.37□□□□□ -0.59
NUP50-219ENST00000497960 DFFBO76075 338 aa11.37□□□□□ -0.59
NUP50-219ENST00000497960 APOHP02749 345 aaPredicted RBP11.37□□□□□ -0.59
NUP50-219ENST00000497960 GATA2P23769 480 aaPredicted RBP11.37□□□□□ -0.59
NUP50-219ENST00000497960 SELENOTP62341 195 aa11.37□□□□□ -0.59
NUP50-219ENST00000497960 USF2Q15853 346 aaPredicted RBP11.37□□□□□ -0.59
NUP50-219ENST00000497960 WFDC3Q8IUB2 231 aa11.37□□□□□ -0.59
NUP50-219ENST00000497960 MGST2Q99735 147 aa11.37□□□□□ -0.59
NUP50-219ENST00000497960 FBXL17Q9UF56 701 aa11.37□□□□□ -0.59
NUP50-219ENST00000497960 RABAC1Q9UI14 185 aa11.37□□□□□ -0.59
NUP50-219ENST00000497960 TNFSF18Q9UNG2 199 aa11.37□□□□□ -0.59
NUP50-219ENST00000497960 WDR83OSQ9Y284 106 aa11.37□□□□□ -0.59
NUP50-219ENST00000497960 KIR2DL5BA0A0G2JN68 375 aa11.36□□□□□ -0.59
NUP50-219ENST00000497960 KIR2DL5BA0A0G2JPC4 375 aa11.36□□□□□ -0.59
NUP50-219ENST00000497960 ARPC5O15511 151 aa11.36□□□□□ -0.59
NUP50-219ENST00000497960 CFDP00746 253 aaPredicted RBP11.36□□□□□ -0.59
NUP50-219ENST00000497960 HNRNPCP07910 306 aaKnown RBP eCLIP11.36□□□□□ -0.59
NUP50-219ENST00000497960 LINC00869P0C866 280 aa11.36□□□□□ -0.59
NUP50-219ENST00000497960 CRYBB3P26998 211 aa11.36□□□□□ -0.59
NUP50-219ENST00000497960 CAMLGP49069 296 aa11.36□□□□□ -0.59
NUP50-219ENST00000497960 AP2S1P53680 142 aaPredicted RBP11.36□□□□□ -0.59
NUP50-219ENST00000497960 Q6ZWC4 215 aa11.36□□□□□ -0.59
NUP50-219ENST00000497960 APRG1Q8IVJ8 170 aa11.36□□□□□ -0.59
NUP50-219ENST00000497960 KIR2DL5AQ8N109 375 aa11.36□□□□□ -0.59
NUP50-219ENST00000497960 STPG3Q8N7X2 389 aa11.36□□□□□ -0.59
NUP50-219ENST00000497960 KIR2DL5BQ8NHK3 375 aa11.36□□□□□ -0.59
NUP50-219ENST00000497960 GRAMD2BQ96HH9 432 aa11.36□□□□□ -0.59
NUP50-219ENST00000497960 ST6GAL2Q96JF0 529 aa11.36□□□□□ -0.59
NUP50-219ENST00000497960 OVOL2Q9BRP0 275 aa11.36□□□□□ -0.59
NUP50-219ENST00000497960 KMT2CQ8NEZ4 4911 aaKnown RBP11.35□□□□□ -0.59
NUP50-219ENST00000497960 TRAV2A0A0B4J234 112 aa11.35□□□□□ -0.59
NUP50-219ENST00000497960 RNF222A6NCQ9 220 aa11.35□□□□□ -0.59
NUP50-219ENST00000497960 MPDU1O75352 247 aa11.35□□□□□ -0.59
NUP50-219ENST00000497960 IFNA5P01569 189 aa11.35□□□□□ -0.59
NUP50-219ENST00000497960 RPL35AP18077 110 aaKnown RBP11.35□□□□□ -0.59
NUP50-219ENST00000497960 OR1B1Q8NGR6 318 aa11.35□□□□□ -0.59
NUP50-219ENST00000497960 PPP1R14BQ96C90 147 aa11.35□□□□□ -0.59
NUP50-219ENST00000497960 MS4A6AQ9H2W1 248 aa11.35□□□□□ -0.59
NUP50-219ENST00000497960 DOK5Q9P104 306 aa11.35□□□□□ -0.59
NUP50-219ENST00000497960 ORM2P19652 201 aa11.34□□□□□ -0.59
NUP50-219ENST00000497960 EIF2B2P49770 351 aaKnown RBP11.34□□□□□ -0.59
NUP50-219ENST00000497960 OPCMLQ14982 345 aa11.34□□□□□ -0.59
NUP50-219ENST00000497960 TMEM182Q6ZP80 229 aaPredicted RBP11.34□□□□□ -0.59
NUP50-219ENST00000497960 TCTE3Q8IZS6 198 aa11.34□□□□□ -0.59
NUP50-219ENST00000497960 NPCDR1Q9BY65 106 aa11.34□□□□□ -0.59
NUP50-219ENST00000497960 WDR61Q9GZS3 305 aaKnown RBP11.34□□□□□ -0.59
NUP50-219ENST00000497960 MAP6D1Q9H9H5 199 aa11.34□□□□□ -0.59
NUP50-219ENST00000497960 KCNIP2Q9NS61 270 aa11.34□□□□□ -0.59
NUP50-219ENST00000497960 PFDN2Q9UHV9 154 aa11.34□□□□□ -0.59
NUP50-219ENST00000497960 TP53TG1Q9Y2A0 90 aa11.34□□□□□ -0.59
NUP50-219ENST00000497960 C17orf112F2Z3M2 114 aa11.33□□□□□ -0.6
NUP50-219ENST00000497960 SPRY2O43597 315 aa11.33□□□□□ -0.6
NUP50-219ENST00000497960 ZNF266Q14584 549 aa11.33□□□□□ -0.6
NUP50-219ENST00000497960 DEFB135Q30KP9 77 aa11.33□□□□□ -0.6
NUP50-219ENST00000497960 MIC13Q5XKP0 118 aa11.33□□□□□ -0.6
NUP50-219ENST00000497960 ZNF709Q8N972 641 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms