RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 RSG1Q9BU20 258 aa16.54■□□□□ 0.24
C9orf3-222ENST00000496567 CYTL1Q9NRR1 136 aa16.54■□□□□ 0.24
C9orf3-222ENST00000496567 HYPMO75409 117 aa16.53■□□□□ 0.24
C9orf3-222ENST00000496567 INSL3P51460 131 aa16.53■□□□□ 0.24
C9orf3-222ENST00000496567 C9orf66Q5T8R8 295 aa16.53■□□□□ 0.24
C9orf3-222ENST00000496567 HSD17B11Q8NBQ5 300 aa16.53■□□□□ 0.24
C9orf3-222ENST00000496567 GPR61Q9BZJ8 451 aa16.53■□□□□ 0.24
C9orf3-222ENST00000496567 SMPXQ9UHP9 88 aa16.53■□□□□ 0.24
C9orf3-222ENST00000496567 TIMM9Q9Y5J7 89 aa16.53■□□□□ 0.24
C9orf3-222ENST00000496567 A0A1W2PS18 150 aa16.52■□□□□ 0.24
C9orf3-222ENST00000496567 GNPNAT1Q96EK6 184 aaPredicted RBP16.52■□□□□ 0.24
C9orf3-222ENST00000496567 ELOA3CA0A087WX78 387 aaPredicted RBP16.51■□□□□ 0.23
C9orf3-222ENST00000496567 OR5G3P0C626 314 aa16.51■□□□□ 0.23
C9orf3-222ENST00000496567 EIF5AP63241 154 aaKnown RBP16.51■□□□□ 0.23
C9orf3-222ENST00000496567 IFITM2Q01629 132 aa16.51■□□□□ 0.23
C9orf3-222ENST00000496567 OR1L4Q8NGR5 311 aa16.51■□□□□ 0.23
C9orf3-222ENST00000496567 DYNLRB2Q8TF09 96 aa16.51■□□□□ 0.23
C9orf3-222ENST00000496567 PSMG3Q9BT73 122 aaPredicted RBP16.51■□□□□ 0.23
C9orf3-222ENST00000496567 ZNF471Q9BX82 626 aaPredicted RBP16.51■□□□□ 0.23
C9orf3-222ENST00000496567 TMEM231Q9H6L2 316 aa16.51■□□□□ 0.23
C9orf3-222ENST00000496567 DOK5Q9P104 306 aa16.51■□□□□ 0.23
C9orf3-222ENST00000496567 HIGD1AQ9Y241 93 aa16.51■□□□□ 0.23
C9orf3-222ENST00000496567 COX7A2P2O60397 106 aa16.51■□□□□ 0.23
C9orf3-222ENST00000496567 IGLL1P15814 213 aa16.51■□□□□ 0.23
C9orf3-222ENST00000496567 EDN2P20800 178 aa16.51■□□□□ 0.23
C9orf3-222ENST00000496567 ATP6V0CP27449 155 aa16.51■□□□□ 0.23
C9orf3-222ENST00000496567 ADAMTSL5Q6ZMM2 481 aa16.51■□□□□ 0.23
C9orf3-222ENST00000496567 PFDN5Q99471 154 aa16.51■□□□□ 0.23
C9orf3-222ENST00000496567 RHPN1-AS1Q9BWJ2 59 aa16.51■□□□□ 0.23
C9orf3-222ENST00000496567 TECRQ9NZ01 308 aaKnown RBP16.51■□□□□ 0.23
C9orf3-222ENST00000496567 U3KQE9 123 aa16.51■□□□□ 0.23
C9orf3-222ENST00000496567 IGHV3-49A0A0A0MS15 119 aa16.5■□□□□ 0.23
C9orf3-222ENST00000496567 GRAMD2BQ96HH9 432 aa16.5■□□□□ 0.23
C9orf3-222ENST00000496567 ARV1Q9H2C2 271 aa16.5■□□□□ 0.23
C9orf3-222ENST00000496567 DNAJC4Q9NNZ3 241 aa16.5■□□□□ 0.23
C9orf3-222ENST00000496567 CHEK1O14757 476 aa16.49■□□□□ 0.23
C9orf3-222ENST00000496567 FFAR4Q5NUL3 377 aa16.49■□□□□ 0.23
C9orf3-222ENST00000496567 SLC51BQ86UW2 128 aa16.49■□□□□ 0.23
C9orf3-222ENST00000496567 VSIRQ9H7M9 311 aa16.49■□□□□ 0.23
C9orf3-222ENST00000496567 APOHP02749 345 aaPredicted RBP16.48■□□□□ 0.23
C9orf3-222ENST00000496567 SERF2P84101 59 aa16.48■□□□□ 0.23
C9orf3-222ENST00000496567 C10orf113Q5VZT2 155 aa16.48■□□□□ 0.23
C9orf3-222ENST00000496567 PATE2Q6UY27 113 aa16.48■□□□□ 0.23
C9orf3-222ENST00000496567 GATAD1Q8WUU5 269 aa16.48■□□□□ 0.23
C9orf3-222ENST00000496567 ST8SIA2Q92186 375 aa16.48■□□□□ 0.23
C9orf3-222ENST00000496567 RNF24Q9Y225 148 aa16.48■□□□□ 0.23
C9orf3-222ENST00000496567 IGHV3OR16-13A0A075B7E8 117 aa16.47■□□□□ 0.23
C9orf3-222ENST00000496567 IGHV3-74A0A0B4J1X5 117 aa16.47■□□□□ 0.23
C9orf3-222ENST00000496567 BUB3O43684 328 aa16.47■□□□□ 0.23
C9orf3-222ENST00000496567 OR2G3Q8NGZ4 309 aa16.47■□□□□ 0.23
C9orf3-222ENST00000496567 TMEM37Q8WXS4 190 aa16.47■□□□□ 0.23
C9orf3-222ENST00000496567 SLC25A39Q9BZJ4 359 aaPredicted RBP16.47■□□□□ 0.23
C9orf3-222ENST00000496567 MLXQ9UH92 298 aa16.47■□□□□ 0.23
C9orf3-222ENST00000496567 DNHD1Q96M86 4753 aa16.47■□□□□ 0.23
C9orf3-222ENST00000496567 IGLV1-51P01701 117 aa16.47■□□□□ 0.23
C9orf3-222ENST00000496567 CD5P06127 495 aa16.47■□□□□ 0.23
C9orf3-222ENST00000496567 TPT1P13693 172 aaKnown RBP16.47■□□□□ 0.23
C9orf3-222ENST00000496567 DEFB114Q30KQ6 69 aa16.47■□□□□ 0.23
C9orf3-222ENST00000496567 C1orf194Q5T5A4 169 aa16.47■□□□□ 0.23
C9orf3-222ENST00000496567 IGHV3-66A0A0C4DH42 116 aa16.46■□□□□ 0.23
C9orf3-222ENST00000496567 ZNF98A6NK75 572 aa16.46■□□□□ 0.23
C9orf3-222ENST00000496567 H3BRN7 92 aa16.46■□□□□ 0.23
C9orf3-222ENST00000496567 WIPF1O43516 503 aa16.46■□□□□ 0.23
C9orf3-222ENST00000496567 ACOT6Q3I5F7 207 aaPredicted RBP16.46■□□□□ 0.23
C9orf3-222ENST00000496567 LINC00305Q7Z4B0 112 aa16.46■□□□□ 0.23
C9orf3-222ENST00000496567 BAP18Q8IXM2 172 aa16.46■□□□□ 0.23
C9orf3-222ENST00000496567 OR2K2Q8NGT1 345 aa16.46■□□□□ 0.23
C9orf3-222ENST00000496567 STOML3Q8TAV4 291 aa16.46■□□□□ 0.23
C9orf3-222ENST00000496567 UHRF2Q96PU4 802 aa16.46■□□□□ 0.23
C9orf3-222ENST00000496567 SHANK2-AS3Q9BTD1 123 aa16.46■□□□□ 0.23
C9orf3-222ENST00000496567 SH3BGRL3Q9H299 93 aa16.46■□□□□ 0.23
C9orf3-222ENST00000496567 SLC25A32Q9H2D1 315 aa16.46■□□□□ 0.23
C9orf3-222ENST00000496567 RFNGQ9Y644 331 aa16.46■□□□□ 0.23
C9orf3-222ENST00000496567 MBP02144 154 aa16.45■□□□□ 0.22
C9orf3-222ENST00000496567 C16orf54Q6UWD8 224 aa16.45■□□□□ 0.22
C9orf3-222ENST00000496567 RNF2Q99496 336 aa16.45■□□□□ 0.22
C9orf3-222ENST00000496567 PKD1L1Q8TDX9 2849 aa16.45■□□□□ 0.22
C9orf3-222ENST00000496567 SPP1P10451 314 aa16.44■□□□□ 0.22
C9orf3-222ENST00000496567 M6PRP20645 277 aa16.44■□□□□ 0.22
C9orf3-222ENST00000496567 GCSAMLQ5JQS6 135 aa16.44■□□□□ 0.22
C9orf3-222ENST00000496567 TEX261Q6UWH6 196 aa16.44■□□□□ 0.22
C9orf3-222ENST00000496567 CD300EQ496F6 205 aaPredicted RBP16.43■□□□□ 0.22
C9orf3-222ENST00000496567 OXLD1Q5BKU9 147 aa16.43■□□□□ 0.22
C9orf3-222ENST00000496567 RBPMS2Q6ZRY4 209 aaKnown RBP16.43■□□□□ 0.22
C9orf3-222ENST00000496567 OR8I2Q8N0Y5 310 aa16.43■□□□□ 0.22
C9orf3-222ENST00000496567 GLMPQ8WWB7 406 aa16.43■□□□□ 0.22
C9orf3-222ENST00000496567 SLC25A22Q9H936 323 aa16.43■□□□□ 0.22
C9orf3-222ENST00000496567 TRAV25A0A0B4J276 109 aa16.43■□□□□ 0.22
C9orf3-222ENST00000496567 HELTA6NFD8 242 aa16.43■□□□□ 0.22
C9orf3-222ENST00000496567 SEC11BP0C7V7 166 aa16.43■□□□□ 0.22
C9orf3-222ENST00000496567 FAM78BQ5VT40 261 aa16.43■□□□□ 0.22
C9orf3-222ENST00000496567 TCF24Q7RTU0 167 aa16.43■□□□□ 0.22
C9orf3-222ENST00000496567 GPR82Q96P67 336 aa16.43■□□□□ 0.22
C9orf3-222ENST00000496567 SCRT1Q9BWW7 348 aa16.43■□□□□ 0.22
C9orf3-222ENST00000496567 CMYA5Q8N3K9 4069 aa16.42■□□□□ 0.22
C9orf3-222ENST00000496567 EIF5AL1Q6IS14 154 aaKnown RBP16.42■□□□□ 0.22
C9orf3-222ENST00000496567 LCN12Q6JVE5 192 aa16.42■□□□□ 0.22
C9orf3-222ENST00000496567 MRPL32Q9BYC8 188 aaKnown RBP16.42■□□□□ 0.22
C9orf3-222ENST00000496567 ZMAT5Q9UDW3 170 aaKnown RBP16.42■□□□□ 0.22
C9orf3-222ENST00000496567 NOTCH3Q9UM47 2321 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms