RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 ZNF709Q8N972 641 aa12.89□□□□□ -0.35
HDAC6-235ENST00000495515 SCGB1C1Q8TD33 95 aa12.89□□□□□ -0.35
HDAC6-235ENST00000495515 SPAG8Q99932 426 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-235ENST00000495515 SMIM3Q9BZL3 60 aa12.89□□□□□ -0.35
HDAC6-235ENST00000495515 RNF24Q9Y225 148 aa12.89□□□□□ -0.35
HDAC6-235ENST00000495515 BUB3O43684 328 aa12.88□□□□□ -0.35
HDAC6-235ENST00000495515 RPL29P47914 159 aaKnown RBP12.88□□□□□ -0.35
HDAC6-235ENST00000495515 RPL11P62913 178 aaKnown RBP12.88□□□□□ -0.35
HDAC6-235ENST00000495515 C1orf194Q5T5A4 169 aa12.88□□□□□ -0.35
HDAC6-235ENST00000495515 PRR25Q96S07 402 aa12.88□□□□□ -0.35
HDAC6-235ENST00000495515 GGTLC1Q9BX51 225 aa12.88□□□□□ -0.35
HDAC6-235ENST00000495515 WDR61Q9GZS3 305 aaKnown RBP12.88□□□□□ -0.35
HDAC6-235ENST00000495515 ARL6Q9H0F7 186 aa12.88□□□□□ -0.35
HDAC6-235ENST00000495515 FBXL17Q9UF56 701 aa12.88□□□□□ -0.35
HDAC6-235ENST00000495515 TNFSF18Q9UNG2 199 aa12.88□□□□□ -0.35
HDAC6-235ENST00000495515 HIGD1AQ9Y241 93 aa12.88□□□□□ -0.35
HDAC6-235ENST00000495515 SELENOKQ9Y6D0 94 aa12.88□□□□□ -0.35
HDAC6-235ENST00000495515 hCG_2014768A0A024R1R8 64 aa12.87□□□□□ -0.35
HDAC6-235ENST00000495515 OR4C46A6NHA9 309 aa12.87□□□□□ -0.35
HDAC6-235ENST00000495515 ZNF785A8K8V0 405 aa12.87□□□□□ -0.35
HDAC6-235ENST00000495515 C17orf112F2Z3M2 114 aa12.87□□□□□ -0.35
HDAC6-235ENST00000495515 PRB2P02812 416 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-235ENST00000495515 OR5G3P0C626 314 aa12.87□□□□□ -0.35
HDAC6-235ENST00000495515 ZNF266Q14584 549 aa12.87□□□□□ -0.35
HDAC6-235ENST00000495515 OPCMLQ14982 345 aa12.87□□□□□ -0.35
HDAC6-235ENST00000495515 C16orf54Q6UWD8 224 aa12.87□□□□□ -0.35
HDAC6-235ENST00000495515 STPG3Q8N7X2 389 aa12.87□□□□□ -0.35
HDAC6-235ENST00000495515 NPCDR1Q9BY65 106 aa12.87□□□□□ -0.35
HDAC6-235ENST00000495515 DOK5Q9P104 306 aa12.87□□□□□ -0.35
HDAC6-235ENST00000495515 ELOA3CA0A087WX78 387 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-235ENST00000495515 G3V3Q6 166 aa12.86□□□□□ -0.35
HDAC6-235ENST00000495515 COX7A2P2O60397 106 aa12.86□□□□□ -0.35
HDAC6-235ENST00000495515 B2MP61769 119 aa12.86□□□□□ -0.35
HDAC6-235ENST00000495515 MIC13Q5XKP0 118 aa12.86□□□□□ -0.35
HDAC6-235ENST00000495515 FAM90A2PQ658T7 463 aa12.86□□□□□ -0.35
HDAC6-235ENST00000495515 OR1L4Q8NGR5 311 aa12.86□□□□□ -0.35
HDAC6-235ENST00000495515 NEURL2Q9BR09 285 aa12.86□□□□□ -0.35
HDAC6-235ENST00000495515 PARD6GQ9BYG4 376 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-235ENST00000495515 SLC39A9Q9NUM3 307 aa12.86□□□□□ -0.35
HDAC6-235ENST00000495515 MEGF8Q7Z7M0 2845 aa12.86□□□□□ -0.35
HDAC6-235ENST00000495515 CMYA5Q8N3K9 4069 aa12.86□□□□□ -0.35
HDAC6-235ENST00000495515 SMLR1H3BR10 107 aa12.85□□□□□ -0.35
HDAC6-235ENST00000495515 DNASE2O00115 360 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-235ENST00000495515 ARPC5O15511 151 aa12.85□□□□□ -0.35
HDAC6-235ENST00000495515 PRR20EP86478 221 aa12.85□□□□□ -0.35
HDAC6-235ENST00000495515 PRR20CP86479 221 aa12.85□□□□□ -0.35
HDAC6-235ENST00000495515 PRR20DP86480 221 aa12.85□□□□□ -0.35
HDAC6-235ENST00000495515 PRR20BP86481 221 aa12.85□□□□□ -0.35
HDAC6-235ENST00000495515 PRR20AP86496 221 aa12.85□□□□□ -0.35
HDAC6-235ENST00000495515 OR8I2Q8N0Y5 310 aa12.85□□□□□ -0.35
HDAC6-235ENST00000495515 GLMPQ8WWB7 406 aa12.85□□□□□ -0.35
HDAC6-235ENST00000495515 PFDN5Q99471 154 aa12.85□□□□□ -0.35
HDAC6-235ENST00000495515 ARV1Q9H2C2 271 aa12.85□□□□□ -0.35
HDAC6-235ENST00000495515 PXMP4Q9Y6I8 212 aa12.85□□□□□ -0.35
HDAC6-235ENST00000495515 IGKV3-7A0A075B6H7 116 aa12.84□□□□□ -0.35
HDAC6-235ENST00000495515 TRAV2A0A0B4J234 112 aa12.84□□□□□ -0.35
HDAC6-235ENST00000495515 RNF222A6NCQ9 220 aa12.84□□□□□ -0.35
HDAC6-235ENST00000495515 ZNF98A6NK75 572 aa12.84□□□□□ -0.35
HDAC6-235ENST00000495515 CMC4P56277 68 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-235ENST00000495515 CD81P60033 236 aa12.84□□□□□ -0.35
HDAC6-235ENST00000495515 SIGLEC15Q6ZMC9 328 aa12.84□□□□□ -0.35
HDAC6-235ENST00000495515 AKAP14Q86UN6 197 aa12.84□□□□□ -0.35
HDAC6-235ENST00000495515 GPR82Q96P67 336 aa12.84□□□□□ -0.35
HDAC6-235ENST00000495515 SHANK2-AS3Q9BTD1 123 aa12.84□□□□□ -0.35
HDAC6-235ENST00000495515 SLC25A39Q9BZJ4 359 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-235ENST00000495515 MFFQ9GZY8 342 aa12.84□□□□□ -0.35
HDAC6-235ENST00000495515 DNAJC4Q9NNZ3 241 aa12.84□□□□□ -0.35
HDAC6-235ENST00000495515 BORCS7-ASMTA0A0B4J1R7 106 aa12.83□□□□□ -0.36
HDAC6-235ENST00000495515 HMSDA8MTL9 139 aa12.83□□□□□ -0.36
HDAC6-235ENST00000495515 H3BRN7 92 aa12.83□□□□□ -0.36
HDAC6-235ENST00000495515 TAAR5O14804 337 aa12.83□□□□□ -0.36
HDAC6-235ENST00000495515 C10orf113Q5VZT2 155 aa12.83□□□□□ -0.36
HDAC6-235ENST00000495515 TCTE3Q8IZS6 198 aa12.83□□□□□ -0.36
HDAC6-235ENST00000495515 STXBP6Q8NFX7 210 aa12.83□□□□□ -0.36
HDAC6-235ENST00000495515 MRAPQ8TCY5 172 aa12.83□□□□□ -0.36
HDAC6-235ENST00000495515 ST6GAL2Q96JF0 529 aa12.83□□□□□ -0.36
HDAC6-235ENST00000495515 MS4A6AQ9H2W1 248 aa12.83□□□□□ -0.36
HDAC6-235ENST00000495515 SLC25A22Q9H936 323 aa12.83□□□□□ -0.36
HDAC6-235ENST00000495515 WFDC1Q9HC57 220 aa12.83□□□□□ -0.36
HDAC6-235ENST00000495515 SMAD5-AS1Q9Y6J3 95 aa12.83□□□□□ -0.36
HDAC6-235ENST00000495515 SORL1Q92673 2214 aa12.82□□□□□ -0.36
HDAC6-235ENST00000495515 K7EIL1 84 aa12.82□□□□□ -0.36
HDAC6-235ENST00000495515 GALR1P47211 349 aa12.82□□□□□ -0.36
HDAC6-235ENST00000495515 TFPI2P48307 235 aa12.82□□□□□ -0.36
HDAC6-235ENST00000495515 DEFB121Q5J5C9 76 aa12.82□□□□□ -0.36
HDAC6-235ENST00000495515 GBGT1Q8N5D6 347 aa12.82□□□□□ -0.36
HDAC6-235ENST00000495515 GATAD1Q8WUU5 269 aa12.82□□□□□ -0.36
HDAC6-235ENST00000495515 RPL7P18124 248 aaKnown RBP12.81□□□□□ -0.36
HDAC6-235ENST00000495515 ZNF345Q14585 488 aa12.81□□□□□ -0.36
HDAC6-235ENST00000495515 SAMD13Q5VXD3 122 aa12.81□□□□□ -0.36
HDAC6-235ENST00000495515 PATE2Q6UY27 113 aa12.81□□□□□ -0.36
HDAC6-235ENST00000495515 LINC00305Q7Z4B0 112 aa12.81□□□□□ -0.36
HDAC6-235ENST00000495515 WFDC3Q8IUB2 231 aa12.81□□□□□ -0.36
HDAC6-235ENST00000495515 UHRF2Q96PU4 802 aa12.81□□□□□ -0.36
HDAC6-235ENST00000495515 SCRT1Q9BWW7 348 aa12.81□□□□□ -0.36
HDAC6-235ENST00000495515 NRN1Q9NPD7 142 aa12.81□□□□□ -0.36
HDAC6-235ENST00000495515 TIMM9Q9Y5J7 89 aa12.81□□□□□ -0.36
HDAC6-235ENST00000495515 A0A0D9SG52 128 aa12.8□□□□□ -0.36
HDAC6-235ENST00000495515 CD7P09564 240 aa12.8□□□□□ -0.36
HDAC6-235ENST00000495515 Q8N1Y9 231 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 190.7 ms