RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 SULT1A4P0DMN0 295 aa10.03□□□□□ -0.8
VARS-228ENST00000495010 MEOX2P50222 304 aa10.03□□□□□ -0.8
VARS-228ENST00000495010 SPATA12Q7Z6I5 190 aa10.03□□□□□ -0.8
VARS-228ENST00000495010 LGI3Q8N145 548 aa10.03□□□□□ -0.8
VARS-228ENST00000495010 TMEM229BQ8NBD8 167 aa10.03□□□□□ -0.8
VARS-228ENST00000495010 OR4D10Q8NGI6 311 aa10.03□□□□□ -0.8
VARS-228ENST00000495010 ZNRF2Q8NHG8 242 aa10.03□□□□□ -0.8
VARS-228ENST00000495010 LHFPL5Q8TAF8 219 aa10.03□□□□□ -0.8
VARS-228ENST00000495010 IGF2BP2-AS1Q96M15 143 aa10.03□□□□□ -0.8
VARS-228ENST00000495010 ZNF705GA8MUZ8 300 aaPredicted RBP10.02□□□□□ -0.81
VARS-228ENST00000495010 INSP01308 110 aa10.02□□□□□ -0.81
VARS-228ENST00000495010 GALR1P47211 349 aa10.02□□□□□ -0.81
VARS-228ENST00000495010 ZNF90Q03938 601 aa10.02□□□□□ -0.81
VARS-228ENST00000495010 CLINT1Q14677 625 aa10.02□□□□□ -0.81
VARS-228ENST00000495010 STEAP1BQ6NZ63 245 aa10.02□□□□□ -0.81
VARS-228ENST00000495010 OR4C16Q8NGL9 310 aa10.02□□□□□ -0.81
VARS-228ENST00000495010 DTD1Q8TEA8 209 aa10.02□□□□□ -0.81
VARS-228ENST00000495010 C15orf40Q8WUR7 153 aa10.02□□□□□ -0.81
VARS-228ENST00000495010 EXTL2Q9UBQ6 330 aa10.02□□□□□ -0.81
VARS-228ENST00000495010 DUSP14O95147 198 aaKnown RBP10.01□□□□□ -0.81
VARS-228ENST00000495010 ATP5G1P05496 136 aa10.01□□□□□ -0.81
VARS-228ENST00000495010 GPX4P36969 197 aaPredicted RBP10.01□□□□□ -0.81
VARS-228ENST00000495010 ATP5G3P48201 142 aa10.01□□□□□ -0.81
VARS-228ENST00000495010 VBP1P61758 197 aa10.01□□□□□ -0.81
VARS-228ENST00000495010 B2MP61769 119 aa10.01□□□□□ -0.81
VARS-228ENST00000495010 NCS1P62166 190 aa10.01□□□□□ -0.81
VARS-228ENST00000495010 OR2F1Q13607 317 aa10.01□□□□□ -0.81
VARS-228ENST00000495010 GPR107Q5VW38 600 aa10.01□□□□□ -0.81
VARS-228ENST00000495010 AP3S1Q92572 193 aa10.01□□□□□ -0.81
VARS-228ENST00000495010 RTBDNQ9BSG5 229 aaPredicted RBP10.01□□□□□ -0.81
VARS-228ENST00000495010 A0A087WXM4 84 aa10□□□□□ -0.81
VARS-228ENST00000495010 DISC1C4P0D8 188 aa10□□□□□ -0.81
VARS-228ENST00000495010 ATP5IP56385 69 aaPredicted RBP10□□□□□ -0.81
VARS-228ENST00000495010 GAMTQ14353 236 aa10□□□□□ -0.81
VARS-228ENST00000495010 SURF2Q15527 256 aaPredicted RBP10□□□□□ -0.81
VARS-228ENST00000495010 RBKSQ9H477 322 aa10□□□□□ -0.81
VARS-228ENST00000495010 SLC25A22Q9H936 323 aa10□□□□□ -0.81
VARS-228ENST00000495010 KCNIP3Q9Y2W7 256 aa10□□□□□ -0.81
VARS-228ENST00000495010 LINC00588Q9Y4M8 146 aa10□□□□□ -0.81
VARS-228ENST00000495010 TMEM56-RWDD3S4R434 201 aa10□□□□□ -0.81
VARS-228ENST00000495010 HSPG2P98160 4391 aa9.99□□□□□ -0.81
VARS-228ENST00000495010 IGKV1D-37A0A075B6S9 117 aa9.99□□□□□ -0.81
VARS-228ENST00000495010 CRYM-AS1A6NIL9 109 aa9.99□□□□□ -0.81
VARS-228ENST00000495010 M0R2Z0 102 aa9.99□□□□□ -0.81
VARS-228ENST00000495010 PRM2P04554 102 aa9.99□□□□□ -0.81
VARS-228ENST00000495010 CCR6P51684 374 aa9.99□□□□□ -0.81
VARS-228ENST00000495010 SPINK13Q1W4C9 94 aa9.99□□□□□ -0.81
VARS-228ENST00000495010 GPR141Q7Z602 305 aa9.99□□□□□ -0.81
VARS-228ENST00000495010 IL22RA2Q969J5 263 aa9.99□□□□□ -0.81
VARS-228ENST00000495010 C20orf173Q96LM9 149 aa9.99□□□□□ -0.81
VARS-228ENST00000495010 RSG1Q9BU20 258 aa9.99□□□□□ -0.81
VARS-228ENST00000495010 CBY3A6NI87 242 aa9.98□□□□□ -0.81
VARS-228ENST00000495010 CFDP00746 253 aaPredicted RBP9.98□□□□□ -0.81
VARS-228ENST00000495010 ZNF182P17025 639 aaPredicted RBP9.98□□□□□ -0.81
VARS-228ENST00000495010 TSPOP30536 169 aa9.98□□□□□ -0.81
VARS-228ENST00000495010 S100A7P31151 101 aa9.98□□□□□ -0.81
VARS-228ENST00000495010 CNN1P51911 297 aaKnown RBP9.98□□□□□ -0.81
VARS-228ENST00000495010 SMCO1Q147U7 214 aa9.98□□□□□ -0.81
VARS-228ENST00000495010 FCN2Q15485 313 aa9.98□□□□□ -0.81
VARS-228ENST00000495010 FAAP20Q6NZ36 180 aa9.98□□□□□ -0.81
VARS-228ENST00000495010 AMTNQ6UX39 209 aa9.98□□□□□ -0.81
VARS-228ENST00000495010 SSX7Q7RTT5 188 aa9.98□□□□□ -0.81
VARS-228ENST00000495010 OR11H7Q8NGC8 314 aa9.98□□□□□ -0.81
VARS-228ENST00000495010 LINC01587Q99440 93 aa9.98□□□□□ -0.81
VARS-228ENST00000495010 TRGV9Q99603 122 aa9.98□□□□□ -0.81
VARS-228ENST00000495010 FUNDC2Q9BWH2 189 aa9.98□□□□□ -0.81
VARS-228ENST00000495010 Q9H8V8 135 aa9.98□□□□□ -0.81
VARS-228ENST00000495010 PPP1R14DQ9NXH3 145 aa9.98□□□□□ -0.81
VARS-228ENST00000495010 HSPB7Q9UBY9 170 aa9.98□□□□□ -0.81
VARS-228ENST00000495010 PAIP2BQ9ULR5 123 aaKnown RBP9.98□□□□□ -0.81
VARS-228ENST00000495010 A8MTW9 85 aa9.97□□□□□ -0.81
VARS-228ENST00000495010 RAB11AP62491 216 aa9.97□□□□□ -0.81
VARS-228ENST00000495010 SSBP1Q04837 148 aaKnown RBP9.97□□□□□ -0.81
VARS-228ENST00000495010 TTC32Q5I0X7 151 aa9.97□□□□□ -0.81
VARS-228ENST00000495010 GGNBP1Q5YKI7 109 aa9.97□□□□□ -0.81
VARS-228ENST00000495010 OR1B1Q8NGR6 318 aa9.97□□□□□ -0.81
VARS-228ENST00000495010 OR1S1Q8NH92 325 aa9.97□□□□□ -0.81
VARS-228ENST00000495010 RNF141Q8WVD5 230 aa9.97□□□□□ -0.81
VARS-228ENST00000495010 SLC25A32Q9H2D1 315 aa9.97□□□□□ -0.81
VARS-228ENST00000495010 GPR132Q9UNW8 380 aa9.97□□□□□ -0.81
VARS-228ENST00000495010 CRXO43186 299 aaPredicted RBP9.96□□□□□ -0.82
VARS-228ENST00000495010 HTN1P15515 57 aa9.96□□□□□ -0.82
VARS-228ENST00000495010 AKR1C4P17516 323 aa9.96□□□□□ -0.82
VARS-228ENST00000495010 FGL1Q08830 312 aa9.96□□□□□ -0.82
VARS-228ENST00000495010 BAP18Q8IXM2 172 aa9.96□□□□□ -0.82
VARS-228ENST00000495010 GPR82Q96P67 336 aa9.96□□□□□ -0.82
VARS-228ENST00000495010 PRR13Q9NZ81 148 aa9.96□□□□□ -0.82
VARS-228ENST00000495010 TRAV12-2A0A075B6T6 113 aa9.95□□□□□ -0.82
VARS-228ENST00000495010 A0A0B4J2A0 478 aa9.95□□□□□ -0.82
VARS-228ENST00000495010 ZNF98A6NK75 572 aa9.95□□□□□ -0.82
VARS-228ENST00000495010 AKAIN1P0CW23 69 aa9.95□□□□□ -0.82
VARS-228ENST00000495010 ORM2P19652 201 aa9.95□□□□□ -0.82
VARS-228ENST00000495010 AZU1P20160 251 aa9.95□□□□□ -0.82
VARS-228ENST00000495010 RHOBP62745 196 aa9.95□□□□□ -0.82
VARS-228ENST00000495010 MRPS10P82664 201 aaKnown RBP9.95□□□□□ -0.82
VARS-228ENST00000495010 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.95□□□□□ -0.82
VARS-228ENST00000495010 TMEM256Q8N2U0 113 aa9.95□□□□□ -0.82
VARS-228ENST00000495010 ZNF738Q8NE65 137 aa9.95□□□□□ -0.82
VARS-228ENST00000495010 C16orf74Q96GX8 76 aa9.95□□□□□ -0.82
VARS-228ENST00000495010 SCGB3A2Q96PL1 93 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms