RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	C10orf113	Q5VZT2	155 aa		10.39	□□□□□ -0.75
APTX-231	ENST00000494973	C18orf65	Q6ZTR6	163 aa		10.39	□□□□□ -0.75
APTX-231	ENST00000494973	LRRC20	Q8TCA0	184 aa		10.39	□□□□□ -0.75
APTX-231	ENST00000494973	ELOVL1	Q9BW60	279 aa		10.39	□□□□□ -0.75
APTX-231	ENST00000494973	SH3BGRL3	Q9H299	93 aa		10.39	□□□□□ -0.75
APTX-231	ENST00000494973	DNAJC4	Q9NNZ3	241 aa		10.39	□□□□□ -0.75
APTX-231	ENST00000494973	BOLA1	Q9Y3E2	137 aa		10.39	□□□□□ -0.75
APTX-231	ENST00000494973		A0A1W2PPV4	95 aa		10.38	□□□□□ -0.75
APTX-231	ENST00000494973	CD5	P06127	495 aa		10.38	□□□□□ -0.75
APTX-231	ENST00000494973	C1orf194	Q5T5A4	169 aa		10.38	□□□□□ -0.75
APTX-231	ENST00000494973	TMEM182	Q6ZP80	229 aa	Predicted RBP	10.38	□□□□□ -0.75
APTX-231	ENST00000494973	TMED6	Q8WW62	240 aa		10.38	□□□□□ -0.75
APTX-231	ENST00000494973	GPR82	Q96P67	336 aa		10.38	□□□□□ -0.75
APTX-231	ENST00000494973	IGHV3-35	A0A0C4DH35	117 aa		10.37	□□□□□ -0.75
APTX-231	ENST00000494973	TEX46	H3BTG2	121 aa		10.37	□□□□□ -0.75
APTX-231	ENST00000494973	OVOL1	O14753	267 aa		10.37	□□□□□ -0.75
APTX-231	ENST00000494973	GATA2	P23769	480 aa	Predicted RBP	10.37	□□□□□ -0.75
APTX-231	ENST00000494973	CRYBB3	P26998	211 aa		10.37	□□□□□ -0.75
APTX-231	ENST00000494973	SLURP1	P55000	103 aa		10.37	□□□□□ -0.75
APTX-231	ENST00000494973	SYNJ2BP	P57105	145 aa		10.37	□□□□□ -0.75
APTX-231	ENST00000494973	USF2	Q15853	346 aa	Predicted RBP	10.37	□□□□□ -0.75
APTX-231	ENST00000494973	STXBP6	Q8NFX7	210 aa		10.37	□□□□□ -0.75
APTX-231	ENST00000494973	OR10G4	Q8NGN3	311 aa		10.37	□□□□□ -0.75
APTX-231	ENST00000494973	OR10G9	Q8NGN4	311 aa		10.37	□□□□□ -0.75
APTX-231	ENST00000494973	OR10G7	Q8NGN6	311 aa		10.37	□□□□□ -0.75
APTX-231	ENST00000494973	OR9G4	Q8NGQ1	327 aa		10.37	□□□□□ -0.75
APTX-231	ENST00000494973	RNF141	Q8WVD5	230 aa		10.37	□□□□□ -0.75
APTX-231	ENST00000494973	RCC1L	Q96I51	464 aa	Known RBP	10.37	□□□□□ -0.75
APTX-231	ENST00000494973	ACTR3C	Q9C0K3	210 aa	Predicted RBP	10.37	□□□□□ -0.75
APTX-231	ENST00000494973	MRPL27	Q9P0M9	148 aa	Known RBP	10.37	□□□□□ -0.75
APTX-231	ENST00000494973	SEC14L6	B5MCN3	397 aa		10.36	□□□□□ -0.75
APTX-231	ENST00000494973	CDC34	P49427	236 aa	Predicted RBP	10.36	□□□□□ -0.75
APTX-231	ENST00000494973	SULT1A2	P50226	295 aa		10.36	□□□□□ -0.75
APTX-231	ENST00000494973	RAB2A	P61019	212 aa		10.36	□□□□□ -0.75
APTX-231	ENST00000494973	KHDC3L	Q587J8	217 aa		10.36	□□□□□ -0.75
APTX-231	ENST00000494973	TEX261	Q6UWH6	196 aa		10.36	□□□□□ -0.75
APTX-231	ENST00000494973	UNQ9165/PRO28630	Q6UXU0	137 aa		10.36	□□□□□ -0.75
APTX-231	ENST00000494973	ZNF767P	Q75MW2	155 aa		10.36	□□□□□ -0.75
APTX-231	ENST00000494973	LINC00305	Q7Z4B0	112 aa		10.36	□□□□□ -0.75
APTX-231	ENST00000494973	SHANK2-AS3	Q9BTD1	123 aa		10.36	□□□□□ -0.75
APTX-231	ENST00000494973	MCRIP2	Q9BUT9	160 aa	Known RBP	10.36	□□□□□ -0.75
APTX-231	ENST00000494973	DOK5	Q9P104	306 aa		10.36	□□□□□ -0.75
APTX-231	ENST00000494973	FUT9	Q9Y231	359 aa		10.36	□□□□□ -0.75
APTX-231	ENST00000494973	IGHV7-4-1	A0A0J9YVY3	117 aa		10.35	□□□□□ -0.75
APTX-231	ENST00000494973	CTXND1	A0A1B0GTU2	59 aa		10.35	□□□□□ -0.75
APTX-231	ENST00000494973		H3BRN7	92 aa		10.35	□□□□□ -0.75
APTX-231	ENST00000494973	RPL7	P18124	248 aa	Known RBP	10.35	□□□□□ -0.75
APTX-231	ENST00000494973	FAM78B	Q5VT40	261 aa		10.35	□□□□□ -0.75
APTX-231	ENST00000494973	DLX4	Q92988	240 aa	Predicted RBP	10.35	□□□□□ -0.75
APTX-231	ENST00000494973	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	10.35	□□□□□ -0.75
APTX-231	ENST00000494973	GPR61	Q9BZJ8	451 aa		10.35	□□□□□ -0.75
APTX-231	ENST00000494973	SIGLEC8	Q9NYZ4	499 aa		10.35	□□□□□ -0.75
APTX-231	ENST00000494973	TECR	Q9NZ01	308 aa	Known RBP	10.35	□□□□□ -0.75
APTX-231	ENST00000494973	UBQLN2	Q9UHD9	624 aa		10.35	□□□□□ -0.75
APTX-231	ENST00000494973	TMEM213	A2RRL7	107 aa		10.34	□□□□□ -0.75
APTX-231	ENST00000494973	HELT	A6NFD8	242 aa		10.34	□□□□□ -0.75
APTX-231	ENST00000494973	C2orf70	A6NJV1	201 aa		10.34	□□□□□ -0.75
APTX-231	ENST00000494973	MEOX2	P50222	304 aa		10.34	□□□□□ -0.75
APTX-231	ENST00000494973	BLOC1S1	P78537	153 aa		10.34	□□□□□ -0.75
APTX-231	ENST00000494973	SAMD13	Q5VXD3	122 aa		10.34	□□□□□ -0.75
APTX-231	ENST00000494973	FAM122C	Q6P4D5	195 aa		10.34	□□□□□ -0.75
APTX-231	ENST00000494973	ALKAL2	Q6UX46	152 aa		10.34	□□□□□ -0.75
APTX-231	ENST00000494973	PQLC2	Q6ZP29	291 aa		10.34	□□□□□ -0.75
APTX-231	ENST00000494973	TMEM37	Q8WXS4	190 aa		10.34	□□□□□ -0.75
APTX-231	ENST00000494973	SAT2	Q96F10	170 aa	Predicted RBP	10.34	□□□□□ -0.75
APTX-231	ENST00000494973	DUX3	Q96PT4	197 aa		10.34	□□□□□ -0.75
APTX-231	ENST00000494973	RPRM	Q9NS64	109 aa		10.34	□□□□□ -0.75
APTX-231	ENST00000494973	COL6A5	A8TX70	2615 aa		10.34	□□□□□ -0.75
APTX-231	ENST00000494973	ZNF98	A6NK75	572 aa		10.33	□□□□□ -0.76
APTX-231	ENST00000494973	BUB3	O43684	328 aa		10.33	□□□□□ -0.76
APTX-231	ENST00000494973	HBE1	P02100	147 aa		10.33	□□□□□ -0.76
APTX-231	ENST00000494973	C8orf88	P0DMB2	117 aa		10.33	□□□□□ -0.76
APTX-231	ENST00000494973	GALR1	P47211	349 aa		10.33	□□□□□ -0.76
APTX-231	ENST00000494973	INSL3	P51460	131 aa		10.33	□□□□□ -0.76
APTX-231	ENST00000494973	PATE2	Q6UY27	113 aa		10.33	□□□□□ -0.76
APTX-231	ENST00000494973	BPIFA4P	Q86YQ2	179 aa		10.33	□□□□□ -0.76
APTX-231	ENST00000494973	OR8I2	Q8N0Y5	310 aa		10.33	□□□□□ -0.76
APTX-231	ENST00000494973	LINC00482	Q8N8I6	264 aa		10.33	□□□□□ -0.76
APTX-231	ENST00000494973	ZNF680	Q8NEM1	530 aa		10.33	□□□□□ -0.76
APTX-231	ENST00000494973	FAM213B	Q8TBF2	198 aa		10.33	□□□□□ -0.76
APTX-231	ENST00000494973	DYNLRB2	Q8TF09	96 aa		10.33	□□□□□ -0.76
APTX-231	ENST00000494973	ZNF414	Q96IQ9	312 aa		10.33	□□□□□ -0.76
APTX-231	ENST00000494973	VSIR	Q9H7M9	311 aa		10.33	□□□□□ -0.76
APTX-231	ENST00000494973	SMPX	Q9UHP9	88 aa		10.33	□□□□□ -0.76
APTX-231	ENST00000494973		U3KQE9	123 aa		10.33	□□□□□ -0.76
APTX-231	ENST00000494973	ZNF705E	A8MWA4	302 aa	Predicted RBP	10.32	□□□□□ -0.76
APTX-231	ENST00000494973	FOLR2	P14207	255 aa		10.32	□□□□□ -0.76
APTX-231	ENST00000494973	CBLN1	P23435	193 aa		10.32	□□□□□ -0.76
APTX-231	ENST00000494973	RAB14	P61106	215 aa		10.32	□□□□□ -0.76
APTX-231	ENST00000494973	TM4SF20	Q53R12	229 aa		10.32	□□□□□ -0.76
APTX-231	ENST00000494973	RPP25L	Q8N5L8	163 aa	Known RBP	10.32	□□□□□ -0.76
APTX-231	ENST00000494973	OR2K2	Q8NGT1	345 aa		10.32	□□□□□ -0.76
APTX-231	ENST00000494973	UHRF2	Q96PU4	802 aa		10.32	□□□□□ -0.76
APTX-231	ENST00000494973	RHPN1-AS1	Q9BWJ2	59 aa		10.32	□□□□□ -0.76
APTX-231	ENST00000494973	SLC25A22	Q9H936	323 aa		10.32	□□□□□ -0.76
APTX-231	ENST00000494973	TMEM14C	Q9P0S9	112 aa		10.32	□□□□□ -0.76
APTX-231	ENST00000494973	IGHV3OR16-8	A0A075B7F1	116 aa		10.31	□□□□□ -0.76
APTX-231	ENST00000494973	MAP1LC3B2	A6NCE7	125 aa		10.31	□□□□□ -0.76
APTX-231	ENST00000494973	CHEK1	O14757	476 aa		10.31	□□□□□ -0.76
APTX-231	ENST00000494973	ZNF207	O43670	478 aa	Known RBP	10.31	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms