RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 OR5C1Q8NGR4 320 aa10.09□□□□□ -0.79
COL1A1-208ENST00000494334 OR1B1Q8NGR6 318 aa10.09□□□□□ -0.79
COL1A1-208ENST00000494334 MGST2Q99735 147 aa10.09□□□□□ -0.79
COL1A1-208ENST00000494334 ASCL2Q99929 193 aa10.09□□□□□ -0.79
COL1A1-208ENST00000494334 TMEM147Q9BVK8 224 aa10.09□□□□□ -0.79
COL1A1-208ENST00000494334 TUBA4BQ9H853 241 aa10.09□□□□□ -0.79
COL1A1-208ENST00000494334 MBD2Q9UBB5 411 aa10.09□□□□□ -0.79
COL1A1-208ENST00000494334 PFDN2Q9UHV9 154 aa10.09□□□□□ -0.79
COL1A1-208ENST00000494334 SLC45A2Q9UMX9 530 aa10.09□□□□□ -0.79
COL1A1-208ENST00000494334 WDR83OSQ9Y284 106 aa10.09□□□□□ -0.79
COL1A1-208ENST00000494334 TRAV2A0A0B4J234 112 aa10.08□□□□□ -0.8
COL1A1-208ENST00000494334 HELTA6NFD8 242 aa10.08□□□□□ -0.8
COL1A1-208ENST00000494334 LYL1P12980 280 aa10.08□□□□□ -0.8
COL1A1-208ENST00000494334 NUP62P37198 522 aaPredicted RBP10.08□□□□□ -0.8
COL1A1-208ENST00000494334 PLP1P60201 277 aa10.08□□□□□ -0.8
COL1A1-208ENST00000494334 BAXQ07812 192 aa10.08□□□□□ -0.8
COL1A1-208ENST00000494334 LINC00322Q6ZN03 302 aaPredicted RBP10.08□□□□□ -0.8
COL1A1-208ENST00000494334 STXBP6Q8NFX7 210 aa10.08□□□□□ -0.8
COL1A1-208ENST00000494334 PPP1R14BQ96C90 147 aa10.08□□□□□ -0.8
COL1A1-208ENST00000494334 CITED4Q96RK1 184 aa10.08□□□□□ -0.8
COL1A1-208ENST00000494334 FAM110AQ9BQ89 295 aa10.08□□□□□ -0.8
COL1A1-208ENST00000494334 SRD5A3Q9H8P0 318 aa10.08□□□□□ -0.8
COL1A1-208ENST00000494334 DOK5Q9P104 306 aa10.08□□□□□ -0.8
COL1A1-208ENST00000494334 UBE2L5PA0A1B0GUS4 154 aa10.07□□□□□ -0.8
COL1A1-208ENST00000494334 GIPP09681 153 aaPredicted RBP10.07□□□□□ -0.8
COL1A1-208ENST00000494334 CAMLGP49069 296 aa10.07□□□□□ -0.8
COL1A1-208ENST00000494334 C1orf194Q5T5A4 169 aa10.07□□□□□ -0.8
COL1A1-208ENST00000494334 SIGLEC15Q6ZMC9 328 aa10.07□□□□□ -0.8
COL1A1-208ENST00000494334 ZNF546Q86UE3 836 aa10.07□□□□□ -0.8
COL1A1-208ENST00000494334 FAM24BQ8N5W8 94 aa10.07□□□□□ -0.8
COL1A1-208ENST00000494334 THAP6Q8TBB0 222 aa10.07□□□□□ -0.8
COL1A1-208ENST00000494334 DCANP1Q8TF63 244 aa10.07□□□□□ -0.8
COL1A1-208ENST00000494334 HUWE1Q7Z6Z7 4374 aaKnown RBP10.06□□□□□ -0.8
COL1A1-208ENST00000494334 RBMY1BA6NDE4 496 aaKnown RBP10.06□□□□□ -0.8
COL1A1-208ENST00000494334 RBMY1EA6NEQ0 496 aaKnown RBP10.06□□□□□ -0.8
COL1A1-208ENST00000494334 ZNF98A6NK75 572 aa10.06□□□□□ -0.8
COL1A1-208ENST00000494334 K7EQG2 157 aa10.06□□□□□ -0.8
COL1A1-208ENST00000494334 HYPMO75409 117 aa10.06□□□□□ -0.8
COL1A1-208ENST00000494334 RBMY1DP0C7P1 496 aaKnown RBP10.06□□□□□ -0.8
COL1A1-208ENST00000494334 RPL12P30050 165 aaKnown RBP10.06□□□□□ -0.8
COL1A1-208ENST00000494334 CMC4P56277 68 aaPredicted RBP10.06□□□□□ -0.8
COL1A1-208ENST00000494334 RAP2BP61225 183 aa10.06□□□□□ -0.8
COL1A1-208ENST00000494334 RAB31Q13636 194 aa10.06□□□□□ -0.8
COL1A1-208ENST00000494334 CLINT1Q14677 625 aa10.06□□□□□ -0.8
COL1A1-208ENST00000494334 Q5BKY6 102 aa10.06□□□□□ -0.8
COL1A1-208ENST00000494334 MIC13Q5XKP0 118 aa10.06□□□□□ -0.8
COL1A1-208ENST00000494334 PATE2Q6UY27 113 aa10.06□□□□□ -0.8
COL1A1-208ENST00000494334 ASB13Q8WXK3 278 aa10.06□□□□□ -0.8
COL1A1-208ENST00000494334 GGTLC1Q9BX51 225 aa10.06□□□□□ -0.8
COL1A1-208ENST00000494334 SLC25A39Q9BZJ4 359 aaPredicted RBP10.06□□□□□ -0.8
COL1A1-208ENST00000494334 ARL6Q9H0F7 186 aa10.06□□□□□ -0.8
COL1A1-208ENST00000494334 MAP6D1Q9H9H5 199 aa10.06□□□□□ -0.8
COL1A1-208ENST00000494334 HIGD1AQ9Y241 93 aa10.06□□□□□ -0.8
COL1A1-208ENST00000494334 HSPB11Q9Y547 144 aa10.06□□□□□ -0.8
COL1A1-208ENST00000494334 H3BRN7 92 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 OR5G3P0C626 314 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 NHLRC4P0CG21 123 aaPredicted RBP10.05□□□□□ -0.8
COL1A1-208ENST00000494334 FGF7P21781 194 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 S100A7P31151 101 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 RPL29P47914 159 aaKnown RBP10.05□□□□□ -0.8
COL1A1-208ENST00000494334 PRR20EP86478 221 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 PRR20CP86479 221 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 PRR20DP86480 221 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 PRR20BP86481 221 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 PRR20AP86496 221 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 OPCMLQ14982 345 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 ZNF124Q15973 351 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 HAGHQ16775 308 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 PXDC1Q5TGL8 231 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 APRG1Q8IVJ8 170 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 OR8I2Q8N0Y5 310 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 CHAC2Q8WUX2 184 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 UHRF2Q96PU4 802 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 SHANK2-AS3Q9BTD1 123 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 ARV1Q9H2C2 271 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 SLC25A22Q9H936 323 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 NRN1Q9NPD7 142 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 FBXL17Q9UF56 701 aa10.05□□□□□ -0.8
COL1A1-208ENST00000494334 DEFB131AP59861 70 aa10.04□□□□□ -0.8
COL1A1-208ENST00000494334 FGL1Q08830 312 aa10.04□□□□□ -0.8
COL1A1-208ENST00000494334 LEMD1Q68G75 181 aa10.04□□□□□ -0.8
COL1A1-208ENST00000494334 Q6ZRG5 221 aa10.04□□□□□ -0.8
COL1A1-208ENST00000494334 TMEM37Q8WXS4 190 aa10.04□□□□□ -0.8
COL1A1-208ENST00000494334 SCRT1Q9BWW7 348 aa10.04□□□□□ -0.8
COL1A1-208ENST00000494334 NPCDR1Q9BY65 106 aa10.04□□□□□ -0.8
COL1A1-208ENST00000494334 SLC25A32Q9H2D1 315 aa10.04□□□□□ -0.8
COL1A1-208ENST00000494334 LOC102724200A0A096LPH7 203 aaPredicted RBP10.03□□□□□ -0.8
COL1A1-208ENST00000494334 MPDU1O75352 247 aa10.03□□□□□ -0.8
COL1A1-208ENST00000494334 B2MP61769 119 aa10.03□□□□□ -0.8
COL1A1-208ENST00000494334 C17orf77Q96MU5 243 aa10.03□□□□□ -0.8
COL1A1-208ENST00000494334 ATP5SQ99766 215 aa10.03□□□□□ -0.8
COL1A1-208ENST00000494334 SMIM3Q9BZL3 60 aa10.03□□□□□ -0.8
COL1A1-208ENST00000494334 WDR61Q9GZS3 305 aaKnown RBP10.03□□□□□ -0.8
COL1A1-208ENST00000494334 ELOA3CA0A087WX78 387 aaPredicted RBP10.02□□□□□ -0.81
COL1A1-208ENST00000494334 COX7A2P2O60397 106 aa10.02□□□□□ -0.81
COL1A1-208ENST00000494334 ZNF688P0C7X2 276 aa10.02□□□□□ -0.81
COL1A1-208ENST00000494334 GALR1P47211 349 aa10.02□□□□□ -0.81
COL1A1-208ENST00000494334 LINC00305Q7Z4B0 112 aa10.02□□□□□ -0.81
COL1A1-208ENST00000494334 S100A7AQ86SG5 101 aa10.02□□□□□ -0.81
COL1A1-208ENST00000494334 OR2T35Q8NGX2 323 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms