RNA–Protein interactions for RNA: ENST00000493673.1

PSMB4-205, Transcript of proteasome subunit beta 4, humanhuman

TSL 5

Gene PSMB4, Length 1,650 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-205ENST00000493673 UBE2CO00762 179 aa11.79□□□□□ -0.52
PSMB4-205ENST00000493673 CST7O76096 145 aa11.79□□□□□ -0.52
PSMB4-205ENST00000493673 DEFB131AP59861 70 aa11.79□□□□□ -0.52
PSMB4-205ENST00000493673 SLC38A11Q08AI6 406 aa11.79□□□□□ -0.52
PSMB4-205ENST00000493673 OR8I2Q8N0Y5 310 aa11.79□□□□□ -0.52
PSMB4-205ENST00000493673 STPG3Q8N7X2 389 aa11.79□□□□□ -0.52
PSMB4-205ENST00000493673 OR1B1Q8NGR6 318 aa11.79□□□□□ -0.52
PSMB4-205ENST00000493673 CITED4Q96RK1 184 aa11.79□□□□□ -0.52
PSMB4-205ENST00000493673 MAP6D1Q9H9H5 199 aa11.79□□□□□ -0.52
PSMB4-205ENST00000493673 NRN1Q9NPD7 142 aa11.79□□□□□ -0.52
PSMB4-205ENST00000493673 LYRM2Q9NU23 88 aaPredicted RBP11.79□□□□□ -0.52
PSMB4-205ENST00000493673 KIR2DL5BA0A0G2JN68 375 aa11.78□□□□□ -0.52
PSMB4-205ENST00000493673 KIR2DL5BA0A0G2JPC4 375 aa11.78□□□□□ -0.52
PSMB4-205ENST00000493673 GATA2P23769 480 aaPredicted RBP11.78□□□□□ -0.52
PSMB4-205ENST00000493673 SULT1A1P50225 295 aa11.78□□□□□ -0.52
PSMB4-205ENST00000493673 RAP2BP61225 183 aa11.78□□□□□ -0.52
PSMB4-205ENST00000493673 SNRPD3P62318 126 aaKnown RBP11.78□□□□□ -0.52
PSMB4-205ENST00000493673 ARL16Q0P5N6 197 aa11.78□□□□□ -0.52
PSMB4-205ENST00000493673 ATP6V1FQ16864 119 aa11.78□□□□□ -0.52
PSMB4-205ENST00000493673 KIR2DL5AQ8N109 375 aa11.78□□□□□ -0.52
PSMB4-205ENST00000493673 TMEM217Q8N7C4 229 aa11.78□□□□□ -0.52
PSMB4-205ENST00000493673 KIR2DL5BQ8NHK3 375 aa11.78□□□□□ -0.52
PSMB4-205ENST00000493673 SLC25A31Q9H0C2 315 aa11.78□□□□□ -0.52
PSMB4-205ENST00000493673 C11orf1Q9H5F2 150 aa11.78□□□□□ -0.52
PSMB4-205ENST00000493673 DNAH9Q9NYC9 4486 aa11.78□□□□□ -0.52
PSMB4-205ENST00000493673 E5RGE8 158 aa11.78□□□□□ -0.52
PSMB4-205ENST00000493673 HYPMO75409 117 aa11.78□□□□□ -0.52
PSMB4-205ENST00000493673 TMEM252Q8N6L7 170 aa11.78□□□□□ -0.52
PSMB4-205ENST00000493673 SEPSECSQ9HD40 501 aaKnown RBP11.78□□□□□ -0.52
PSMB4-205ENST00000493673 RNF24Q9Y225 148 aa11.78□□□□□ -0.52
PSMB4-205ENST00000493673 RPL35AP18077 110 aaKnown RBP11.77□□□□□ -0.53
PSMB4-205ENST00000493673 ID1P41134 155 aa11.77□□□□□ -0.53
PSMB4-205ENST00000493673 PXDC1Q5TGL8 231 aa11.77□□□□□ -0.53
PSMB4-205ENST00000493673 TMEM182Q6ZP80 229 aaPredicted RBP11.77□□□□□ -0.53
PSMB4-205ENST00000493673 ZNF546Q86UE3 836 aa11.77□□□□□ -0.53
PSMB4-205ENST00000493673 DCANP1Q8TF63 244 aa11.77□□□□□ -0.53
PSMB4-205ENST00000493673 UQCC1Q9NVA1 299 aa11.77□□□□□ -0.53
PSMB4-205ENST00000493673 COL7A1Q02388 2944 aa11.77□□□□□ -0.53
PSMB4-205ENST00000493673 OR5G3P0C626 314 aa11.76□□□□□ -0.53
PSMB4-205ENST00000493673 ZNF688P0C7X2 276 aa11.76□□□□□ -0.53
PSMB4-205ENST00000493673 LINC00869P0C866 280 aa11.76□□□□□ -0.53
PSMB4-205ENST00000493673 PET100P0DJ07 73 aa11.76□□□□□ -0.53
PSMB4-205ENST00000493673 GALR1P47211 349 aa11.76□□□□□ -0.53
PSMB4-205ENST00000493673 LRRC37A5PQ49AS3 106 aa11.76□□□□□ -0.53
PSMB4-205ENST00000493673 STHQ8IWL8 128 aa11.76□□□□□ -0.53
PSMB4-205ENST00000493673 GPR82Q96P67 336 aa11.76□□□□□ -0.53
PSMB4-205ENST00000493673 HIGD1AQ9Y241 93 aa11.76□□□□□ -0.53
PSMB4-205ENST00000493673 ZNF98A6NK75 572 aa11.75□□□□□ -0.53
PSMB4-205ENST00000493673 AGPAT2O15120 278 aa11.75□□□□□ -0.53
PSMB4-205ENST00000493673 SAMD13Q5VXD3 122 aa11.75□□□□□ -0.53
PSMB4-205ENST00000493673 LEMD1Q68G75 181 aa11.75□□□□□ -0.53
PSMB4-205ENST00000493673 ARL6Q9H0F7 186 aa11.75□□□□□ -0.53
PSMB4-205ENST00000493673 CSTL1Q9H114 145 aa11.75□□□□□ -0.53
PSMB4-205ENST00000493673 SLC25A22Q9H936 323 aa11.75□□□□□ -0.53
PSMB4-205ENST00000493673 IGSF23A1L1A6 192 aa11.75□□□□□ -0.53
PSMB4-205ENST00000493673 CAMLGP49069 296 aa11.75□□□□□ -0.53
PSMB4-205ENST00000493673 H2BFSP57053 126 aa11.75□□□□□ -0.53
PSMB4-205ENST00000493673 PLP1P60201 277 aa11.75□□□□□ -0.53
PSMB4-205ENST00000493673 Q6ZWC4 215 aa11.75□□□□□ -0.53
PSMB4-205ENST00000493673 FAM24BQ8N5W8 94 aa11.75□□□□□ -0.53
PSMB4-205ENST00000493673 PPP1R1CQ8WVI7 109 aa11.75□□□□□ -0.53
PSMB4-205ENST00000493673 DOK5Q9P104 306 aa11.75□□□□□ -0.53
PSMB4-205ENST00000493673 ALG5Q9Y673 324 aa11.75□□□□□ -0.53
PSMB4-205ENST00000493673 MEOX2P50222 304 aa11.74□□□□□ -0.53
PSMB4-205ENST00000493673 ZNF124Q15973 351 aa11.74□□□□□ -0.53
PSMB4-205ENST00000493673 PSMG4Q5JS54 123 aa11.74□□□□□ -0.53
PSMB4-205ENST00000493673 Q6ZRG5 221 aa11.74□□□□□ -0.53
PSMB4-205ENST00000493673 MED28Q9H204 178 aa11.74□□□□□ -0.53
PSMB4-205ENST00000493673 RGS21Q2M5E4 152 aa11.73□□□□□ -0.53
PSMB4-205ENST00000493673 RSG1Q9BU20 258 aa11.73□□□□□ -0.53
PSMB4-205ENST00000493673 SLC25A39Q9BZJ4 359 aaPredicted RBP11.73□□□□□ -0.53
PSMB4-205ENST00000493673 TP53TG1Q9Y2A0 90 aa11.73□□□□□ -0.53
PSMB4-205ENST00000493673 ELOA3CA0A087WX78 387 aaPredicted RBP11.72□□□□□ -0.53
PSMB4-205ENST00000493673 SPRY2O43597 315 aa11.72□□□□□ -0.53
PSMB4-205ENST00000493673 MPC2O95563 127 aa11.72□□□□□ -0.53
PSMB4-205ENST00000493673 BAXQ07812 192 aa11.72□□□□□ -0.53
PSMB4-205ENST00000493673 VWC2Q2TAL6 325 aa11.72□□□□□ -0.53
PSMB4-205ENST00000493673 LINC00052Q96N35 136 aa11.72□□□□□ -0.53
PSMB4-205ENST00000493673 SHANK2-AS3Q9BTD1 123 aa11.72□□□□□ -0.53
PSMB4-205ENST00000493673 RETNQ9HD89 108 aa11.72□□□□□ -0.53
PSMB4-205ENST00000493673 OR5AC2Q9NZP5 309 aa11.72□□□□□ -0.53
PSMB4-205ENST00000493673 WDR83OSQ9Y284 106 aa11.72□□□□□ -0.53
PSMB4-205ENST00000493673 COX7A2P2O60397 106 aa11.71□□□□□ -0.53
PSMB4-205ENST00000493673 MPDU1O75352 247 aa11.71□□□□□ -0.53
PSMB4-205ENST00000493673 RPL7P18124 248 aaKnown RBP11.71□□□□□ -0.53
PSMB4-205ENST00000493673 NHLH2Q02577 135 aa11.71□□□□□ -0.53
PSMB4-205ENST00000493673 ACTL10Q5JWF8 245 aa11.71□□□□□ -0.53
PSMB4-205ENST00000493673 MGST2Q99735 147 aa11.71□□□□□ -0.53
PSMB4-205ENST00000493673 ARV1Q9H2C2 271 aa11.71□□□□□ -0.53
PSMB4-205ENST00000493673 UBE2L5PA0A1B0GUS4 154 aa11.71□□□□□ -0.54
PSMB4-205ENST00000493673 H0YIZ8 118 aa11.71□□□□□ -0.54
PSMB4-205ENST00000493673 H3BRN7 92 aa11.71□□□□□ -0.54
PSMB4-205ENST00000493673 ATF4P18848 351 aaPredicted RBP11.71□□□□□ -0.54
PSMB4-205ENST00000493673 EWSR1Q01844 656 aaKnown RBP eCLIP11.71□□□□□ -0.54
PSMB4-205ENST00000493673 OR5C1Q8NGR4 320 aa11.71□□□□□ -0.54
PSMB4-205ENST00000493673 C16orf92Q96LL3 132 aa11.71□□□□□ -0.54
PSMB4-205ENST00000493673 OVOL2Q9BRP0 275 aa11.71□□□□□ -0.54
PSMB4-205ENST00000493673 RNF126Q9BV68 326 aa11.71□□□□□ -0.54
PSMB4-205ENST00000493673 SLC25A32Q9H2D1 315 aa11.71□□□□□ -0.54
PSMB4-205ENST00000493673 DNAJC4Q9NNZ3 241 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms