RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 GRAMD2BQ96HH9 432 aa8.8□□□□□ -1
LSM2-214ENST00000493387 PFDN5Q99471 154 aa8.8□□□□□ -1
LSM2-214ENST00000493387 PSMG3Q9BT73 122 aaPredicted RBP8.8□□□□□ -1
LSM2-214ENST00000493387 PBDC1Q9BVG4 233 aa8.8□□□□□ -1
LSM2-214ENST00000493387 CYTL1Q9NRR1 136 aa8.8□□□□□ -1
LSM2-214ENST00000493387 TECRQ9NZ01 308 aaKnown RBP8.8□□□□□ -1
LSM2-214ENST00000493387 SMPXQ9UHP9 88 aa8.8□□□□□ -1
LSM2-214ENST00000493387 IGHV3OR16-8A0A075B7F1 116 aa8.79□□□□□ -1
LSM2-214ENST00000493387 IGHV7-4-1A0A0J9YVY3 117 aa8.79□□□□□ -1
LSM2-214ENST00000493387 COX7A2P2O60397 106 aa8.79□□□□□ -1
LSM2-214ENST00000493387 OR5G3P0C626 314 aa8.79□□□□□ -1
LSM2-214ENST00000493387 FOLR2P14207 255 aa8.79□□□□□ -1
LSM2-214ENST00000493387 ORM2P19652 201 aa8.79□□□□□ -1
LSM2-214ENST00000493387 SERF2P84101 59 aa8.79□□□□□ -1
LSM2-214ENST00000493387 USF2Q15853 346 aaPredicted RBP8.79□□□□□ -1
LSM2-214ENST00000493387 IL34Q6ZMJ4 242 aa8.79□□□□□ -1
LSM2-214ENST00000493387 TMEM182Q6ZP80 229 aaPredicted RBP8.79□□□□□ -1
LSM2-214ENST00000493387 C9orf62Q8N4C0 152 aa8.79□□□□□ -1
LSM2-214ENST00000493387 HSD17B11Q8NBQ5 300 aa8.79□□□□□ -1
LSM2-214ENST00000493387 DYNLRB2Q8TF09 96 aa8.79□□□□□ -1
LSM2-214ENST00000493387 GATAD1Q8WUU5 269 aa8.79□□□□□ -1
LSM2-214ENST00000493387 RNF2Q99496 336 aa8.79□□□□□ -1
LSM2-214ENST00000493387 RSG1Q9BU20 258 aa8.79□□□□□ -1
LSM2-214ENST00000493387 ZNF471Q9BX82 626 aaPredicted RBP8.79□□□□□ -1
LSM2-214ENST00000493387 ARV1Q9H2C2 271 aa8.79□□□□□ -1
LSM2-214ENST00000493387 DNAJC4Q9NNZ3 241 aa8.79□□□□□ -1
LSM2-214ENST00000493387 HIGD1AQ9Y241 93 aa8.79□□□□□ -1
LSM2-214ENST00000493387 U3KQE9 123 aa8.79□□□□□ -1
LSM2-214ENST00000493387 ZNF207O43670 478 aaKnown RBP8.78□□□□□ -1
LSM2-214ENST00000493387 SAP30O75446 220 aa8.78□□□□□ -1
LSM2-214ENST00000493387 MBP02144 154 aa8.78□□□□□ -1
LSM2-214ENST00000493387 ATP6V0CP27449 155 aa8.78□□□□□ -1
LSM2-214ENST00000493387 ACOT6Q3I5F7 207 aaPredicted RBP8.78□□□□□ -1
LSM2-214ENST00000493387 FFAR4Q5NUL3 377 aa8.78□□□□□ -1
LSM2-214ENST00000493387 C1orf194Q5T5A4 169 aa8.78□□□□□ -1
LSM2-214ENST00000493387 C10orf113Q5VZT2 155 aa8.78□□□□□ -1
LSM2-214ENST00000493387 SLC51BQ86UW2 128 aa8.78□□□□□ -1
LSM2-214ENST00000493387 OR2K2Q8NGT1 345 aa8.78□□□□□ -1
LSM2-214ENST00000493387 OR2G3Q8NGZ4 309 aa8.78□□□□□ -1
LSM2-214ENST00000493387 RHPN1-AS1Q9BWJ2 59 aa8.78□□□□□ -1
LSM2-214ENST00000493387 VSIRQ9H7M9 311 aa8.78□□□□□ -1
LSM2-214ENST00000493387 ZMAT5Q9UDW3 170 aaKnown RBP8.78□□□□□ -1
LSM2-214ENST00000493387 CHEK1O14757 476 aa8.77□□□□□ -1.01
LSM2-214ENST00000493387 TPT1P13693 172 aaKnown RBP8.77□□□□□ -1.01
LSM2-214ENST00000493387 LAMTOR1Q6IAA8 161 aa8.77□□□□□ -1.01
LSM2-214ENST00000493387 EIF5AL1Q6IS14 154 aaKnown RBP8.77□□□□□ -1.01
LSM2-214ENST00000493387 BAP18Q8IXM2 172 aa8.77□□□□□ -1.01
LSM2-214ENST00000493387 STOML3Q8TAV4 291 aa8.77□□□□□ -1.01
LSM2-214ENST00000493387 SHANK2-AS3Q9BTD1 123 aa8.77□□□□□ -1.01
LSM2-214ENST00000493387 DOK5Q9P104 306 aa8.77□□□□□ -1.01
LSM2-214ENST00000493387 TENM1Q9UKZ4 2725 aa8.77□□□□□ -1.01
LSM2-214ENST00000493387 TRAV25A0A0B4J276 109 aa8.76□□□□□ -1.01
LSM2-214ENST00000493387 HELTA6NFD8 242 aa8.76□□□□□ -1.01
LSM2-214ENST00000493387 WIPF1O43516 503 aa8.76□□□□□ -1.01
LSM2-214ENST00000493387 BUB3O43684 328 aa8.76□□□□□ -1.01
LSM2-214ENST00000493387 SEC11BP0C7V7 166 aa8.76□□□□□ -1.01
LSM2-214ENST00000493387 M6PRP20645 277 aa8.76□□□□□ -1.01
LSM2-214ENST00000493387 NKX2-5P52952 324 aaPredicted RBP8.76□□□□□ -1.01
LSM2-214ENST00000493387 DEFB114Q30KQ6 69 aa8.76□□□□□ -1.01
LSM2-214ENST00000493387 GPR82Q96P67 336 aa8.76□□□□□ -1.01
LSM2-214ENST00000493387 SLC25A39Q9BZJ4 359 aaPredicted RBP8.76□□□□□ -1.01
LSM2-214ENST00000493387 SLC25A32Q9H2D1 315 aa8.76□□□□□ -1.01
LSM2-214ENST00000493387 IGHV3-49A0A0A0MS15 119 aa8.75□□□□□ -1.01
LSM2-214ENST00000493387 ZNF98A6NK75 572 aa8.75□□□□□ -1.01
LSM2-214ENST00000493387 H3BRN7 92 aa8.75□□□□□ -1.01
LSM2-214ENST00000493387 IGLV1-51P01701 117 aa8.75□□□□□ -1.01
LSM2-214ENST00000493387 SPP1P10451 314 aa8.75□□□□□ -1.01
LSM2-214ENST00000493387 IGLL1P15814 213 aa8.75□□□□□ -1.01
LSM2-214ENST00000493387 RHOBP62745 196 aa8.75□□□□□ -1.01
LSM2-214ENST00000493387 AKR1C8PQ5T2L2 129 aa8.75□□□□□ -1.01
LSM2-214ENST00000493387 C16orf54Q6UWD8 224 aa8.75□□□□□ -1.01
LSM2-214ENST00000493387 PATE2Q6UY27 113 aa8.75□□□□□ -1.01
LSM2-214ENST00000493387 ADAMTSL5Q6ZMM2 481 aa8.75□□□□□ -1.01
LSM2-214ENST00000493387 LINC00305Q7Z4B0 112 aa8.75□□□□□ -1.01
LSM2-214ENST00000493387 OR8I2Q8N0Y5 310 aa8.75□□□□□ -1.01
LSM2-214ENST00000493387 TMEM37Q8WXS4 190 aa8.75□□□□□ -1.01
LSM2-214ENST00000493387 ST8SIA2Q92186 375 aa8.75□□□□□ -1.01
LSM2-214ENST00000493387 MRPL32Q9BYC8 188 aaKnown RBP8.75□□□□□ -1.01
LSM2-214ENST00000493387 NOTCH3Q9UM47 2321 aa8.74□□□□□ -1.01
LSM2-214ENST00000493387 UMAD1C9J7I0 102 aa8.74□□□□□ -1.01
LSM2-214ENST00000493387 APOHP02749 345 aaPredicted RBP8.74□□□□□ -1.01
LSM2-214ENST00000493387 RPL7P18124 248 aaKnown RBP8.74□□□□□ -1.01
LSM2-214ENST00000493387 GALR1P47211 349 aa8.74□□□□□ -1.01
LSM2-214ENST00000493387 PAFAH1B2P68402 229 aa8.74□□□□□ -1.01
LSM2-214ENST00000493387 LCN12Q6JVE5 192 aa8.74□□□□□ -1.01
LSM2-214ENST00000493387 RBPMS2Q6ZRY4 209 aaKnown RBP8.74□□□□□ -1.01
LSM2-214ENST00000493387 TCF24Q7RTU0 167 aa8.74□□□□□ -1.01
LSM2-214ENST00000493387 GLMPQ8WWB7 406 aa8.74□□□□□ -1.01
LSM2-214ENST00000493387 SH3BGRL3Q9H299 93 aa8.74□□□□□ -1.01
LSM2-214ENST00000493387 MLXQ9UH92 298 aa8.74□□□□□ -1.01
LSM2-214ENST00000493387 IGHV3OR16-13A0A075B7E8 117 aa8.73□□□□□ -1.01
LSM2-214ENST00000493387 IGHV3-74A0A0B4J1X5 117 aa8.73□□□□□ -1.01
LSM2-214ENST00000493387 IGHV3-66A0A0C4DH42 116 aa8.73□□□□□ -1.01
LSM2-214ENST00000493387 A0A1W2PPV4 95 aa8.73□□□□□ -1.01
LSM2-214ENST00000493387 BOLA2-SMG1P6H3BVE0 249 aa8.73□□□□□ -1.01
LSM2-214ENST00000493387 MEOX2P50222 304 aa8.73□□□□□ -1.01
LSM2-214ENST00000493387 TAS2R45P59539 299 aa8.73□□□□□ -1.01
LSM2-214ENST00000493387 CD300EQ496F6 205 aaPredicted RBP8.73□□□□□ -1.01
LSM2-214ENST00000493387 TMEM41BQ5BJD5 291 aa8.73□□□□□ -1.01
LSM2-214ENST00000493387 FAM78BQ5VT40 261 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms