RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 GLMPQ8WWB7 406 aa10.44□□□□□ -0.74
CCM2-217ENST00000492883 WFDC10AQ9H1F0 79 aa10.44□□□□□ -0.74
CCM2-217ENST00000492883 C19orf73Q9NVV2 129 aa10.44□□□□□ -0.74
CCM2-217ENST00000492883 DOK5Q9P104 306 aa10.44□□□□□ -0.74
CCM2-217ENST00000492883 MEGF8Q7Z7M0 2845 aa10.44□□□□□ -0.74
CCM2-217ENST00000492883 NOTCH1P46531 2555 aa10.43□□□□□ -0.74
CCM2-217ENST00000492883 UBE2L5PA0A1B0GUS4 154 aa10.43□□□□□ -0.74
CCM2-217ENST00000492883 HYPMO75409 117 aa10.43□□□□□ -0.74
CCM2-217ENST00000492883 OR5G3P0C626 314 aa10.43□□□□□ -0.74
CCM2-217ENST00000492883 RAP2BP61225 183 aa10.43□□□□□ -0.74
CCM2-217ENST00000492883 BAXQ07812 192 aa10.43□□□□□ -0.74
CCM2-217ENST00000492883 ZNF546Q86UE3 836 aa10.43□□□□□ -0.74
CCM2-217ENST00000492883 OR5C1Q8NGR4 320 aa10.43□□□□□ -0.74
CCM2-217ENST00000492883 SRD5A3Q9H8P0 318 aa10.43□□□□□ -0.74
CCM2-217ENST00000492883 MBD2Q9UBB5 411 aa10.43□□□□□ -0.74
CCM2-217ENST00000492883 TRAV2A0A0B4J234 112 aa10.42□□□□□ -0.74
CCM2-217ENST00000492883 CAMLGP49069 296 aa10.42□□□□□ -0.74
CCM2-217ENST00000492883 VWC2Q2TAL6 325 aa10.42□□□□□ -0.74
CCM2-217ENST00000492883 C1orf194Q5T5A4 169 aa10.42□□□□□ -0.74
CCM2-217ENST00000492883 SIGLEC15Q6ZMC9 328 aa10.42□□□□□ -0.74
CCM2-217ENST00000492883 OR8I2Q8N0Y5 310 aa10.42□□□□□ -0.74
CCM2-217ENST00000492883 STPG3Q8N7X2 389 aa10.42□□□□□ -0.74
CCM2-217ENST00000492883 MGST2Q99735 147 aa10.42□□□□□ -0.74
CCM2-217ENST00000492883 ARL6Q9H0F7 186 aa10.42□□□□□ -0.74
CCM2-217ENST00000492883 FBXL17Q9UF56 701 aa10.42□□□□□ -0.74
CCM2-217ENST00000492883 SLC45A2Q9UMX9 530 aa10.42□□□□□ -0.74
CCM2-217ENST00000492883 HIGD1AQ9Y241 93 aa10.42□□□□□ -0.74
CCM2-217ENST00000492883 WDR83OSQ9Y284 106 aa10.42□□□□□ -0.74
CCM2-217ENST00000492883 ZNF98A6NK75 572 aa10.41□□□□□ -0.74
CCM2-217ENST00000492883 GIPP09681 153 aaPredicted RBP10.41□□□□□ -0.74
CCM2-217ENST00000492883 NHLRC4P0CG21 123 aaPredicted RBP10.41□□□□□ -0.74
CCM2-217ENST00000492883 FGF7P21781 194 aa10.41□□□□□ -0.74
CCM2-217ENST00000492883 RPL12P30050 165 aaKnown RBP10.41□□□□□ -0.74
CCM2-217ENST00000492883 PLP1P60201 277 aa10.41□□□□□ -0.74
CCM2-217ENST00000492883 FGL1Q08830 312 aa10.41□□□□□ -0.74
CCM2-217ENST00000492883 CLINT1Q14677 625 aa10.41□□□□□ -0.74
CCM2-217ENST00000492883 Q6ZRG5 221 aa10.41□□□□□ -0.74
CCM2-217ENST00000492883 S100A7AQ86SG5 101 aa10.41□□□□□ -0.74
CCM2-217ENST00000492883 SBSPONQ8IVN8 264 aa10.41□□□□□ -0.74
CCM2-217ENST00000492883 ASB13Q8WXK3 278 aa10.41□□□□□ -0.74
CCM2-217ENST00000492883 FAM110AQ9BQ89 295 aa10.41□□□□□ -0.74
CCM2-217ENST00000492883 SLC25A22Q9H936 323 aa10.41□□□□□ -0.74
CCM2-217ENST00000492883 ODF3L2Q3SX64 289 aa10.4□□□□□ -0.74
CCM2-217ENST00000492883 PXDC1Q5TGL8 231 aa10.4□□□□□ -0.74
CCM2-217ENST00000492883 APRG1Q8IVJ8 170 aa10.4□□□□□ -0.74
CCM2-217ENST00000492883 NRN1Q9NPD7 142 aa10.4□□□□□ -0.74
CCM2-217ENST00000492883 HSPB11Q9Y547 144 aa10.4□□□□□ -0.74
CCM2-217ENST00000492883 RBMY1BA6NDE4 496 aaKnown RBP10.39□□□□□ -0.75
CCM2-217ENST00000492883 RBMY1EA6NEQ0 496 aaKnown RBP10.39□□□□□ -0.75
CCM2-217ENST00000492883 K7EQG2 157 aa10.39□□□□□ -0.75
CCM2-217ENST00000492883 COX7A2P2O60397 106 aa10.39□□□□□ -0.75
CCM2-217ENST00000492883 MPDU1O75352 247 aa10.39□□□□□ -0.75
CCM2-217ENST00000492883 RBMY1DP0C7P1 496 aaKnown RBP10.39□□□□□ -0.75
CCM2-217ENST00000492883 LYL1P12980 280 aa10.39□□□□□ -0.75
CCM2-217ENST00000492883 DEFB131AP59861 70 aa10.39□□□□□ -0.75
CCM2-217ENST00000492883 MIC13Q5XKP0 118 aa10.39□□□□□ -0.75
CCM2-217ENST00000492883 FAM24BQ8N5W8 94 aa10.39□□□□□ -0.75
CCM2-217ENST00000492883 DCANP1Q8TF63 244 aa10.39□□□□□ -0.75
CCM2-217ENST00000492883 CITED4Q96RK1 184 aa10.39□□□□□ -0.75
CCM2-217ENST00000492883 SHANK2-AS3Q9BTD1 123 aa10.39□□□□□ -0.75
CCM2-217ENST00000492883 SCRT1Q9BWW7 348 aa10.39□□□□□ -0.75
CCM2-217ENST00000492883 GGTLC1Q9BX51 225 aa10.39□□□□□ -0.75
CCM2-217ENST00000492883 SLC25A39Q9BZJ4 359 aaPredicted RBP10.39□□□□□ -0.75
CCM2-217ENST00000492883 SMIM3Q9BZL3 60 aa10.39□□□□□ -0.75
CCM2-217ENST00000492883 ARV1Q9H2C2 271 aa10.39□□□□□ -0.75
CCM2-217ENST00000492883 MAP6D1Q9H9H5 199 aa10.39□□□□□ -0.75
CCM2-217ENST00000492883 LOC102724200A0A096LPH7 203 aaPredicted RBP10.38□□□□□ -0.75
CCM2-217ENST00000492883 H3BRN7 92 aa10.38□□□□□ -0.75
CCM2-217ENST00000492883 ZNF688P0C7X2 276 aa10.38□□□□□ -0.75
CCM2-217ENST00000492883 GALR1P47211 349 aa10.38□□□□□ -0.75
CCM2-217ENST00000492883 RPL29P47914 159 aaKnown RBP10.38□□□□□ -0.75
CCM2-217ENST00000492883 HAGHQ16775 308 aa10.38□□□□□ -0.75
CCM2-217ENST00000492883 Q5BKY6 102 aa10.38□□□□□ -0.75
CCM2-217ENST00000492883 LEMD1Q68G75 181 aa10.38□□□□□ -0.75
CCM2-217ENST00000492883 PATE2Q6UY27 113 aa10.38□□□□□ -0.75
CCM2-217ENST00000492883 LINC00322Q6ZN03 302 aaPredicted RBP10.38□□□□□ -0.75
CCM2-217ENST00000492883 ZNF709Q8N972 641 aa10.38□□□□□ -0.75
CCM2-217ENST00000492883 UHRF2Q96PU4 802 aa10.38□□□□□ -0.75
CCM2-217ENST00000492883 ATP5SQ99766 215 aa10.38□□□□□ -0.75
CCM2-217ENST00000492883 SLC39A9Q9NUM3 307 aa10.38□□□□□ -0.75
CCM2-217ENST00000492883 RNF24Q9Y225 148 aa10.38□□□□□ -0.75
CCM2-217ENST00000492883 ELOA3CA0A087WX78 387 aaPredicted RBP10.37□□□□□ -0.75
CCM2-217ENST00000492883 IFNA5P01569 189 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 B2MP61769 119 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 SNRPD3P62318 126 aaKnown RBP10.37□□□□□ -0.75
CCM2-217ENST00000492883 PRR20EP86478 221 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 PRR20CP86479 221 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 PRR20DP86480 221 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 PRR20BP86481 221 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 PRR20AP86496 221 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 OPCMLQ14982 345 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 ZNF124Q15973 351 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 C10orf113Q5VZT2 155 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 LINC00305Q7Z4B0 112 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 OR1L4Q8NGR5 311 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 OR2T35Q8NGX2 323 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 SCGB1C1Q8TD33 95 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 CHAC2Q8WUX2 184 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 GPR82Q96P67 336 aa10.37□□□□□ -0.75
CCM2-217ENST00000492883 RSG1Q9BU20 258 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms