RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ZNF584Q8IVC4 421 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 C10orf105Q8TEF2 133 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 GEMIN6Q8WXD5 167 aaKnown RBP3.19□□□□□ -1.9
BRCA1-220ENST00000492859 HDHD3Q9BSH5 251 aaPredicted RBP3.19□□□□□ -1.9
BRCA1-220ENST00000492859 TMEM243Q9BU79 118 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 ZNF702PQ9H963 129 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 SIX2Q9NPC8 291 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 TNFRSF19Q9NS68 423 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 RABAC1Q9UI14 185 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 RGPD1P0DJD0 1748 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 MYO3AQ8NEV4 1616 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 ABCC1P33527 1531 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 SIPA1L3O60292 1781 aaPredicted RBP3.19□□□□□ -1.9
BRCA1-220ENST00000492859 RGPD2P0DJD1 1756 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 TRPM6Q9BX84 2022 aa3.19□□□□□ -1.9
BRCA1-220ENST00000492859 UGGT1Q9NYU2 1555 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 C1orf167Q5SNV9 1468 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 ANKRD12Q6UB98 2062 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 EXPH5Q8NEV8 1989 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 TRPM7Q96QT4 1865 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 MYO5AQ9Y4I1 1855 aaKnown RBP3.18□□□□□ -1.9
BRCA1-220ENST00000492859 IGHV3-20A0A0C4DH32 117 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 FAM24AA6NFZ4 105 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 A8MWL6 223 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 PATE3B3GLJ2 98 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 INS-IGF2F8WCM5 200 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 H3BUT2 72 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 K7ERJ3 54 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 COX7A2P2O60397 106 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 ZNF253O75346 499 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 TCL1BO95988 128 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 IGLV3-27P01718 113 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 VDAC1P21796 283 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 AQP1P29972 269 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 LINC00205P59089 165 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 NPC2P61916 151 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 ADIGQ0VDE8 80 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 C1orf100Q5SVJ3 147 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 FP248Q71RG6 208 aaPredicted RBP3.18□□□□□ -1.9
BRCA1-220ENST00000492859 C17orf82Q86X59 251 aaPredicted RBP3.18□□□□□ -1.9
BRCA1-220ENST00000492859 ZNF555Q8NEP9 628 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 PPDPFLQ8WWR9 84 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 C11orf52Q96A22 123 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 MS4A6EQ96DS6 147 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 ABHD14BQ96IU4 210 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 PMCHL2Q9BQD1 86 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 PARP12Q9H0J9 701 aaKnown RBP3.18□□□□□ -1.9
BRCA1-220ENST00000492859 LINC00588Q9Y4M8 146 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 INSL5Q9Y5Q6 135 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 MROH2AA6NES4 1674 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 BTAF1O14981 1849 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 ZFC3H1O60293 1989 aaKnown RBP3.18□□□□□ -1.9
BRCA1-220ENST00000492859 COL11A2P13942 1736 aaPredicted RBP3.18□□□□□ -1.9
BRCA1-220ENST00000492859 ADGRL1O94910 1474 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 ATP7BP35670 1465 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 PXDNQ92626 1479 aa3.18□□□□□ -1.9
BRCA1-220ENST00000492859 EFCAB6Q5THR3 1501 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 ARHGEF12Q9NZN5 1544 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 IGHV3OR16-12A0A075B7B8 117 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 TRBV7-7A0A0K0K1E9 115 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 BUB1B-PAK6H3BSN5 160 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 OR1I1O60431 355 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 COX6A1P12074 109 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 IGLL1P15814 213 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 ZNF136P52737 540 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 TAS2R19P59542 299 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 RPL23P62829 140 aaKnown RBP3.17□□□□□ -1.9
BRCA1-220ENST00000492859 ORMDL2Q53FV1 153 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 SH2D6Q7Z4S9 175 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 MDP1Q86V88 176 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 Q8N976 141 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 MORN4Q8NDC4 146 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 OR5H2Q8NGV7 314 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 FAM57AQ8TBR7 257 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 C18orf32Q8TCD1 76 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 PYGO2Q9BRQ0 406 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 DPH3P1Q9H4G8 78 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 PLEKHF2Q9H8W4 249 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 AIG1Q9NVV5 245 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 PRO0461Q9UI25 63 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 UNC13BO14795 1591 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 VWDEQ8N2E2 1590 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 MED12LQ86YW9 2145 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 PEAK1Q9H792 1746 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 PTPRDP23468 1912 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 ARHGAP21Q5T5U3 1957 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 IGKV1-9A0A0C4DH69 117 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 SYS1-DBNDD2H3BUS1 97 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 K7EQD1 137 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 CREBL2O60519 120 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-220ENST00000492859 NXPH4O95158 308 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 SOD1P00441 154 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 C1QAP02745 245 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 ZNF688P0C7X2 276 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 COL5A3P25940 1745 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-220ENST00000492859 IL3RAP26951 378 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 ERVK-16P61578 105 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 ZNF345Q14585 488 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 KIAA0087Q14695 138 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 PMCHL1Q16048 86 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms