RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 PAXXQ9BUH6 204 aa14.63□□□□□ -0.07
COL16A1-215ENST00000488897 AMMECR1Q9Y4X0 333 aaPredicted RBP14.63□□□□□ -0.07
COL16A1-215ENST00000488897 ZNF253O75346 499 aa14.62□□□□□ -0.07
COL16A1-215ENST00000488897 CCL3L1P16619 93 aa14.62□□□□□ -0.07
COL16A1-215ENST00000488897 SLC35B1P78383 322 aa14.62□□□□□ -0.07
COL16A1-215ENST00000488897 TDRG1Q3Y452 100 aa14.62□□□□□ -0.07
COL16A1-215ENST00000488897 MORN5Q5VZ52 161 aa14.62□□□□□ -0.07
COL16A1-215ENST00000488897 TMEM200BQ69YZ2 307 aa14.62□□□□□ -0.07
COL16A1-215ENST00000488897 OR10X1Q8NGY0 326 aa14.62□□□□□ -0.07
COL16A1-215ENST00000488897 TMEM186Q96B77 213 aa14.62□□□□□ -0.07
COL16A1-215ENST00000488897 KCNS1Q96KK3 526 aa14.62□□□□□ -0.07
COL16A1-215ENST00000488897 ATG101Q9BSB4 218 aa14.62□□□□□ -0.07
COL16A1-215ENST00000488897 ZNF331Q9NQX6 463 aaPredicted RBP14.62□□□□□ -0.07
COL16A1-215ENST00000488897 TCRBV4S1A1TA0A5B7 111 aa14.62□□□□□ -0.07
COL16A1-215ENST00000488897 KIAA1644Q3SXP7 199 aa14.62□□□□□ -0.07
COL16A1-215ENST00000488897 MRPL54Q6P161 138 aaKnown RBP14.62□□□□□ -0.07
COL16A1-215ENST00000488897 RASL11AQ6T310 242 aa14.62□□□□□ -0.07
COL16A1-215ENST00000488897 FAM231DQ6ZW35 169 aa14.62□□□□□ -0.07
COL16A1-215ENST00000488897 Q71RC1 249 aaPredicted RBP14.62□□□□□ -0.07
COL16A1-215ENST00000488897 ZNF355PQ9NSJ1 428 aa14.62□□□□□ -0.07
COL16A1-215ENST00000488897 E7EUB6 86 aa14.61□□□□□ -0.07
COL16A1-215ENST00000488897 LRRC75A-AS1Q8N1F1 130 aa14.61□□□□□ -0.07
COL16A1-215ENST00000488897 LINC00311Q8N616 119 aa14.61□□□□□ -0.07
COL16A1-215ENST00000488897 C8orf31Q8N9H6 132 aa14.61□□□□□ -0.07
COL16A1-215ENST00000488897 FAM103A1Q9BTL3 118 aaKnown RBP14.61□□□□□ -0.07
COL16A1-215ENST00000488897 FBXL7Q9UJT9 491 aa14.61□□□□□ -0.07
COL16A1-215ENST00000488897 PAM16Q9Y3D7 125 aa14.61□□□□□ -0.07
COL16A1-215ENST00000488897 TBL2Q9Y4P3 447 aaKnown RBP14.61□□□□□ -0.07
COL16A1-215ENST00000488897 BMPR1BO00238 502 aa14.61□□□□□ -0.07
COL16A1-215ENST00000488897 APCSP02743 223 aa14.61□□□□□ -0.07
COL16A1-215ENST00000488897 REG1BP48304 166 aa14.61□□□□□ -0.07
COL16A1-215ENST00000488897 COMPP49747 757 aaPredicted RBP14.61□□□□□ -0.07
COL16A1-215ENST00000488897 WT1-ASQ06250 92 aa14.61□□□□□ -0.07
COL16A1-215ENST00000488897 THAP8Q8NA92 274 aa14.61□□□□□ -0.07
COL16A1-215ENST00000488897 NPIPB3Q92617 1050 aa14.61□□□□□ -0.07
COL16A1-215ENST00000488897 FOXC2Q99958 501 aa14.61□□□□□ -0.07
COL16A1-215ENST00000488897 NRN1Q9NPD7 142 aa14.61□□□□□ -0.07
COL16A1-215ENST00000488897 MTORP42345 2549 aa14.6□□□□□ -0.07
COL16A1-215ENST00000488897 REG1AP05451 166 aa14.6□□□□□ -0.07
COL16A1-215ENST00000488897 SRIP30626 198 aa14.6□□□□□ -0.07
COL16A1-215ENST00000488897 AMTP48728 403 aa14.6□□□□□ -0.07
COL16A1-215ENST00000488897 OR4B1Q8NGF8 309 aa14.6□□□□□ -0.07
COL16A1-215ENST00000488897 ZNF596Q8TC21 504 aa14.6□□□□□ -0.07
COL16A1-215ENST00000488897 CHRDL1Q9BU40 450 aa14.6□□□□□ -0.07
COL16A1-215ENST00000488897 FNDC4Q9H6D8 234 aaPredicted RBP14.6□□□□□ -0.07
COL16A1-215ENST00000488897 WASHC3Q9Y3C0 194 aa14.6□□□□□ -0.07
COL16A1-215ENST00000488897 A0A1W2PS18 150 aa14.6□□□□□ -0.07
COL16A1-215ENST00000488897 C22orf46C9J442 243 aa14.6□□□□□ -0.07
COL16A1-215ENST00000488897 KRTDAPP60985 99 aa14.6□□□□□ -0.07
COL16A1-215ENST00000488897 SSBP2P81877 361 aaPredicted RBP14.6□□□□□ -0.07
COL16A1-215ENST00000488897 ZNF329Q86UD4 541 aa14.6□□□□□ -0.07
COL16A1-215ENST00000488897 WIPF2Q8TF74 440 aaPredicted RBP14.6□□□□□ -0.07
COL16A1-215ENST00000488897 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.59□□□□□ -0.078e-12■■■■□ 24
COL16A1-215ENST00000488897 CGB1A6NKQ9 187 aa14.59□□□□□ -0.07
COL16A1-215ENST00000488897 DIRC3C9JPN6 131 aa14.59□□□□□ -0.07
COL16A1-215ENST00000488897 PEX7O00628 323 aa14.59□□□□□ -0.07
COL16A1-215ENST00000488897 PYYP10082 97 aa14.59□□□□□ -0.07
COL16A1-215ENST00000488897 PATE2Q6UY27 113 aa14.59□□□□□ -0.07
COL16A1-215ENST00000488897 GRAMD2BQ96HH9 432 aa14.59□□□□□ -0.07
COL16A1-215ENST00000488897 NDUFB3O43676 98 aa14.58□□□□□ -0.07
COL16A1-215ENST00000488897 NHLRC2Q8NBF2 726 aa14.58□□□□□ -0.07
COL16A1-215ENST00000488897 LINC00479Q96M42 142 aa14.58□□□□□ -0.07
COL16A1-215ENST00000488897 IGKV1D-37A0A075B6S9 117 aa14.58□□□□□ -0.08
COL16A1-215ENST00000488897 ZNF324O75467 553 aaPredicted RBP14.58□□□□□ -0.08
COL16A1-215ENST00000488897 IGLV2-23P01705 113 aa14.58□□□□□ -0.08
COL16A1-215ENST00000488897 ZNF124Q15973 351 aa14.58□□□□□ -0.08
COL16A1-215ENST00000488897 VMA21Q3ZAQ7 101 aa14.58□□□□□ -0.08
COL16A1-215ENST00000488897 LRRC10Q5BKY1 277 aa14.58□□□□□ -0.08
COL16A1-215ENST00000488897 STXBP6Q8NFX7 210 aa14.58□□□□□ -0.08
COL16A1-215ENST00000488897 F8P00451 2351 aa14.58□□□□□ -0.08
COL16A1-215ENST00000488897 NIPBLQ6KC79 2804 aaeCLIP14.58□□□□□ -0.08
COL16A1-215ENST00000488897 OR8B3Q8NGG8 313 aa14.57□□□□□ -0.08
COL16A1-215ENST00000488897 ST6GALNAC6Q969X2 333 aa14.57□□□□□ -0.08
COL16A1-215ENST00000488897 RCHY1Q96PM5 261 aa14.57□□□□□ -0.08
COL16A1-215ENST00000488897 OR8B2Q96RD0 313 aa14.57□□□□□ -0.08
COL16A1-215ENST00000488897 CA1P00915 261 aaPredicted RBP14.57□□□□□ -0.08
COL16A1-215ENST00000488897 MC5RP33032 325 aa14.57□□□□□ -0.08
COL16A1-215ENST00000488897 C10orf55Q5SWW7 151 aa14.57□□□□□ -0.08
COL16A1-215ENST00000488897 ETFRF1Q6IPR1 90 aa14.57□□□□□ -0.08
COL16A1-215ENST00000488897 Q8N976 141 aa14.57□□□□□ -0.08
COL16A1-215ENST00000488897 FXYD5Q96DB9 178 aa14.57□□□□□ -0.08
COL16A1-215ENST00000488897 SSBP3Q9BWW4 388 aaPredicted RBP14.57□□□□□ -0.08
COL16A1-215ENST00000488897 MRPL27Q9P0M9 148 aaKnown RBP14.57□□□□□ -0.08
COL16A1-215ENST00000488897 NDUFS8O00217 210 aa14.56□□□□□ -0.08
COL16A1-215ENST00000488897 RPLP1P05386 114 aaKnown RBP14.56□□□□□ -0.08
COL16A1-215ENST00000488897 PMCHP20382 165 aa14.56□□□□□ -0.08
COL16A1-215ENST00000488897 ZNF137PP52743 207 aa14.56□□□□□ -0.08
COL16A1-215ENST00000488897 TMEM155Q4W5P6 130 aa14.56□□□□□ -0.08
COL16A1-215ENST00000488897 NUDT10Q8NFP7 164 aa14.56□□□□□ -0.08
COL16A1-215ENST00000488897 NUDT11Q96G61 164 aa14.56□□□□□ -0.08
COL16A1-215ENST00000488897 RNF114Q9Y508 228 aa14.56□□□□□ -0.08
COL16A1-215ENST00000488897 FSTL3O95633 263 aa14.56□□□□□ -0.08
COL16A1-215ENST00000488897 ARF6P62330 175 aa14.56□□□□□ -0.08
COL16A1-215ENST00000488897 DIAPH2-AS1Q14236 149 aa14.56□□□□□ -0.08
COL16A1-215ENST00000488897 C19orf35Q6ZS72 473 aa14.56□□□□□ -0.08
COL16A1-215ENST00000488897 LINC00305Q7Z4B0 112 aa14.56□□□□□ -0.08
COL16A1-215ENST00000488897 TMEM68Q96MH6 324 aa14.56□□□□□ -0.08
COL16A1-215ENST00000488897 LGALS7P47929 136 aa14.55□□□□□ -0.08
COL16A1-215ENST00000488897 TSKUQ8WUA8 353 aa14.55□□□□□ -0.08
COL16A1-215ENST00000488897 IGHV3OR16-10A0A075B7F0 116 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms