RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 MED28Q9H204 178 aa13.87□□□□□ -0.19
PTCD3-217ENST00000488801 HELTA6NFD8 242 aa13.86□□□□□ -0.19
PTCD3-217ENST00000488801 K7EQG2 157 aa13.86□□□□□ -0.19
PTCD3-217ENST00000488801 BAXQ07812 192 aa13.86□□□□□ -0.19
PTCD3-217ENST00000488801 C1orf194Q5T5A4 169 aa13.86□□□□□ -0.19
PTCD3-217ENST00000488801 SBSPONQ8IVN8 264 aa13.86□□□□□ -0.19
PTCD3-217ENST00000488801 CHAC2Q8WUX2 184 aa13.86□□□□□ -0.19
PTCD3-217ENST00000488801 ASB13Q8WXK3 278 aa13.86□□□□□ -0.19
PTCD3-217ENST00000488801 UQCC1Q9NVA1 299 aa13.86□□□□□ -0.19
PTCD3-217ENST00000488801 MBD2Q9UBB5 411 aa13.86□□□□□ -0.19
PTCD3-217ENST00000488801 RBMY1BA6NDE4 496 aaKnown RBP13.85□□□□□ -0.19
PTCD3-217ENST00000488801 RBMY1EA6NEQ0 496 aaKnown RBP13.85□□□□□ -0.19
PTCD3-217ENST00000488801 AGPAT2O15120 278 aa13.85□□□□□ -0.19
PTCD3-217ENST00000488801 RBMY1DP0C7P1 496 aaKnown RBP13.85□□□□□ -0.19
PTCD3-217ENST00000488801 LINC00869P0C866 280 aa13.85□□□□□ -0.19
PTCD3-217ENST00000488801 NHLH2Q02577 135 aa13.85□□□□□ -0.19
PTCD3-217ENST00000488801 ATP6V1FQ16864 119 aa13.85□□□□□ -0.19
PTCD3-217ENST00000488801 ZNF546Q86UE3 836 aa13.85□□□□□ -0.19
PTCD3-217ENST00000488801 FAM24BQ8N5W8 94 aa13.85□□□□□ -0.19
PTCD3-217ENST00000488801 SLC25A31Q9H0C2 315 aa13.85□□□□□ -0.19
PTCD3-217ENST00000488801 SRD5A3Q9H8P0 318 aa13.85□□□□□ -0.19
PTCD3-217ENST00000488801 MAP6D1Q9H9H5 199 aa13.85□□□□□ -0.19
PTCD3-217ENST00000488801 NBEAL2Q6ZNJ1 2754 aa13.85□□□□□ -0.19
PTCD3-217ENST00000488801 H3BRN7 92 aa13.84□□□□□ -0.19
PTCD3-217ENST00000488801 PAFAH1B2P68402 229 aa13.84□□□□□ -0.19
PTCD3-217ENST00000488801 SIGLEC15Q6ZMC9 328 aa13.84□□□□□ -0.19
PTCD3-217ENST00000488801 GBGT1Q8N5D6 347 aa13.84□□□□□ -0.19
PTCD3-217ENST00000488801 TM2D3Q9BRN9 247 aa13.84□□□□□ -0.19
PTCD3-217ENST00000488801 GGTLC1Q9BX51 225 aa13.84□□□□□ -0.19
PTCD3-217ENST00000488801 UBQLN2Q9UHD9 624 aa13.84□□□□□ -0.19
PTCD3-217ENST00000488801 IGKV3-7A0A075B6H7 116 aa13.83□□□□□ -0.2
PTCD3-217ENST00000488801 UBE2L5PA0A1B0GUS4 154 aa13.83□□□□□ -0.2
PTCD3-217ENST00000488801 GIPP09681 153 aaPredicted RBP13.83□□□□□ -0.2
PTCD3-217ENST00000488801 NHLRC4P0CG21 123 aaPredicted RBP13.83□□□□□ -0.2
PTCD3-217ENST00000488801 PRR20EP86478 221 aa13.83□□□□□ -0.2
PTCD3-217ENST00000488801 PRR20CP86479 221 aa13.83□□□□□ -0.2
PTCD3-217ENST00000488801 PRR20DP86480 221 aa13.83□□□□□ -0.2
PTCD3-217ENST00000488801 PRR20BP86481 221 aa13.83□□□□□ -0.2
PTCD3-217ENST00000488801 PRR20AP86496 221 aa13.83□□□□□ -0.2
PTCD3-217ENST00000488801 OPCMLQ14982 345 aa13.83□□□□□ -0.2
PTCD3-217ENST00000488801 PXDC1Q5TGL8 231 aa13.83□□□□□ -0.2
PTCD3-217ENST00000488801 OR5C1Q8NGR4 320 aa13.83□□□□□ -0.2
PTCD3-217ENST00000488801 FBXL17Q9UF56 701 aa13.83□□□□□ -0.2
PTCD3-217ENST00000488801 PFDN2Q9UHV9 154 aa13.83□□□□□ -0.2
PTCD3-217ENST00000488801 HSPB11Q9Y547 144 aa13.83□□□□□ -0.2
PTCD3-217ENST00000488801 ZNF98A6NK75 572 aa13.82□□□□□ -0.2
PTCD3-217ENST00000488801 TFPI2P48307 235 aa13.82□□□□□ -0.2
PTCD3-217ENST00000488801 CAMLGP49069 296 aa13.82□□□□□ -0.2
PTCD3-217ENST00000488801 AP2S1P53680 142 aaPredicted RBP13.82□□□□□ -0.2
PTCD3-217ENST00000488801 HAGHQ16775 308 aa13.82□□□□□ -0.2
PTCD3-217ENST00000488801 PATE2Q6UY27 113 aa13.82□□□□□ -0.2
PTCD3-217ENST00000488801 STXBP6Q8NFX7 210 aa13.82□□□□□ -0.2
PTCD3-217ENST00000488801 OR1B1Q8NGR6 318 aa13.82□□□□□ -0.2
PTCD3-217ENST00000488801 C17orf77Q96MU5 243 aa13.82□□□□□ -0.2
PTCD3-217ENST00000488801 SHANK2-AS3Q9BTD1 123 aa13.82□□□□□ -0.2
PTCD3-217ENST00000488801 SEPSECSQ9HD40 501 aaKnown RBP13.82□□□□□ -0.2
PTCD3-217ENST00000488801 NRN1Q9NPD7 142 aa13.82□□□□□ -0.2
PTCD3-217ENST00000488801 SOCS3O14543 225 aa13.81□□□□□ -0.2
PTCD3-217ENST00000488801 ORM2P19652 201 aa13.81□□□□□ -0.2
PTCD3-217ENST00000488801 CMC4P56277 68 aaPredicted RBP13.81□□□□□ -0.2
PTCD3-217ENST00000488801 ASCL2Q99929 193 aa13.81□□□□□ -0.2
PTCD3-217ENST00000488801 SLC25A39Q9BZJ4 359 aaPredicted RBP13.81□□□□□ -0.2
PTCD3-217ENST00000488801 SLC25A32Q9H2D1 315 aa13.81□□□□□ -0.2
PTCD3-217ENST00000488801 TUBA4BQ9H853 241 aa13.81□□□□□ -0.2
PTCD3-217ENST00000488801 HIGD1AQ9Y241 93 aa13.81□□□□□ -0.2
PTCD3-217ENST00000488801 G3V3Q6 166 aa13.8□□□□□ -0.2
PTCD3-217ENST00000488801 DNASE2O00115 360 aaPredicted RBP13.8□□□□□ -0.2
PTCD3-217ENST00000488801 MPDU1O75352 247 aa13.8□□□□□ -0.2
PTCD3-217ENST00000488801 HYPMO75409 117 aa13.8□□□□□ -0.2
PTCD3-217ENST00000488801 RPL29P47914 159 aaKnown RBP13.8□□□□□ -0.2
PTCD3-217ENST00000488801 RPL11P62913 178 aaKnown RBP13.8□□□□□ -0.2
PTCD3-217ENST00000488801 SCRT1Q9BWW7 348 aa13.8□□□□□ -0.2
PTCD3-217ENST00000488801 DOK5Q9P104 306 aa13.8□□□□□ -0.2
PTCD3-217ENST00000488801 RPL12P30050 165 aaKnown RBP13.79□□□□□ -0.2
PTCD3-217ENST00000488801 RAP2BP61225 183 aa13.79□□□□□ -0.2
PTCD3-217ENST00000488801 ZNF124Q15973 351 aa13.79□□□□□ -0.2
PTCD3-217ENST00000488801 Q5BKY6 102 aa13.79□□□□□ -0.2
PTCD3-217ENST00000488801 MIC13Q5XKP0 118 aa13.79□□□□□ -0.2
PTCD3-217ENST00000488801 WFDC3Q8IUB2 231 aa13.79□□□□□ -0.2
PTCD3-217ENST00000488801 TMEM37Q8WXS4 190 aa13.79□□□□□ -0.2
PTCD3-217ENST00000488801 UHRF2Q96PU4 802 aa13.79□□□□□ -0.2
PTCD3-217ENST00000488801 NPCDR1Q9BY65 106 aa13.79□□□□□ -0.2
PTCD3-217ENST00000488801 ARL6Q9H0F7 186 aa13.79□□□□□ -0.2
PTCD3-217ENST00000488801 ARV1Q9H2C2 271 aa13.79□□□□□ -0.2
PTCD3-217ENST00000488801 DNAH7Q8WXX0 4024 aa13.79□□□□□ -0.2
PTCD3-217ENST00000488801 MRPS12O15235 138 aaKnown RBP13.78□□□□□ -0.2
PTCD3-217ENST00000488801 FGF7P21781 194 aa13.78□□□□□ -0.2
PTCD3-217ENST00000488801 S100A7P31151 101 aa13.78□□□□□ -0.2
PTCD3-217ENST00000488801 RAB31Q13636 194 aa13.78□□□□□ -0.2
PTCD3-217ENST00000488801 CLINT1Q14677 625 aa13.78□□□□□ -0.2
PTCD3-217ENST00000488801 APRG1Q8IVJ8 170 aa13.78□□□□□ -0.2
PTCD3-217ENST00000488801 OR8I2Q8N0Y5 310 aa13.78□□□□□ -0.2
PTCD3-217ENST00000488801 THAP6Q8TBB0 222 aa13.78□□□□□ -0.2
PTCD3-217ENST00000488801 PPP1R14BQ96C90 147 aa13.78□□□□□ -0.2
PTCD3-217ENST00000488801 GPR82Q96P67 336 aa13.78□□□□□ -0.2
PTCD3-217ENST00000488801 ATP5SQ99766 215 aa13.78□□□□□ -0.2
PTCD3-217ENST00000488801 WDR61Q9GZS3 305 aaKnown RBP13.78□□□□□ -0.2
PTCD3-217ENST00000488801 DEFB131AP59861 70 aa13.77□□□□□ -0.21
PTCD3-217ENST00000488801 FGL1Q08830 312 aa13.77□□□□□ -0.21
PTCD3-217ENST00000488801 LEMD1Q68G75 181 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms