RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 FGL1Q08830 312 aa8.28□□□□□ -1.08
UBE4B-210ENST00000488228 OPCMLQ14982 345 aa8.28□□□□□ -1.08
UBE4B-210ENST00000488228 ATP6V1FQ16864 119 aa8.28□□□□□ -1.08
UBE4B-210ENST00000488228 MIC13Q5XKP0 118 aa8.28□□□□□ -1.08
UBE4B-210ENST00000488228 FAM90A2PQ658T7 463 aa8.28□□□□□ -1.08
UBE4B-210ENST00000488228 LAMTOR1Q6IAA8 161 aa8.28□□□□□ -1.08
UBE4B-210ENST00000488228 GTSCR1Q86UQ5 136 aa8.28□□□□□ -1.08
UBE4B-210ENST00000488228 GBGT1Q8N5D6 347 aa8.28□□□□□ -1.08
UBE4B-210ENST00000488228 GRAMD2BQ96HH9 432 aa8.28□□□□□ -1.08
UBE4B-210ENST00000488228 UHRF2Q96PU4 802 aa8.28□□□□□ -1.08
UBE4B-210ENST00000488228 ATP5SQ99766 215 aa8.28□□□□□ -1.08
UBE4B-210ENST00000488228 SPAG8Q99932 426 aaPredicted RBP8.28□□□□□ -1.08
UBE4B-210ENST00000488228 SCRT1Q9BWW7 348 aa8.28□□□□□ -1.08
UBE4B-210ENST00000488228 NPCDR1Q9BY65 106 aa8.28□□□□□ -1.08
UBE4B-210ENST00000488228 WFDC1Q9HC57 220 aa8.28□□□□□ -1.08
UBE4B-210ENST00000488228 FBXL17Q9UF56 701 aa8.28□□□□□ -1.08
UBE4B-210ENST00000488228 A0A1W2PS18 150 aa8.27□□□□□ -1.09
UBE4B-210ENST00000488228 RNF222A6NCQ9 220 aa8.27□□□□□ -1.09
UBE4B-210ENST00000488228 BUB3O43684 328 aa8.27□□□□□ -1.09
UBE4B-210ENST00000488228 CFDP00746 253 aaPredicted RBP8.27□□□□□ -1.09
UBE4B-210ENST00000488228 OR5G3P0C626 314 aa8.27□□□□□ -1.09
UBE4B-210ENST00000488228 RPL11P62913 178 aaKnown RBP8.27□□□□□ -1.09
UBE4B-210ENST00000488228 LEMD1Q68G75 181 aa8.27□□□□□ -1.09
UBE4B-210ENST00000488228 C16orf54Q6UWD8 224 aa8.27□□□□□ -1.09
UBE4B-210ENST00000488228 Q8N1Y9 231 aa8.27□□□□□ -1.09
UBE4B-210ENST00000488228 STXBP6Q8NFX7 210 aa8.27□□□□□ -1.09
UBE4B-210ENST00000488228 AQP10Q96PS8 301 aa8.27□□□□□ -1.09
UBE4B-210ENST00000488228 NEURL2Q9BR09 285 aa8.27□□□□□ -1.09
UBE4B-210ENST00000488228 ARL6Q9H0F7 186 aa8.27□□□□□ -1.09
UBE4B-210ENST00000488228 SLC25A22Q9H936 323 aa8.27□□□□□ -1.09
UBE4B-210ENST00000488228 HIGD1AQ9Y241 93 aa8.27□□□□□ -1.09
UBE4B-210ENST00000488228 OR4C46A6NHA9 309 aa8.26□□□□□ -1.09
UBE4B-210ENST00000488228 H3BRN7 92 aa8.26□□□□□ -1.09
UBE4B-210ENST00000488228 COX7A2P2O60397 106 aa8.26□□□□□ -1.09
UBE4B-210ENST00000488228 HYPMO75409 117 aa8.26□□□□□ -1.09
UBE4B-210ENST00000488228 NUP62P37198 522 aaPredicted RBP8.26□□□□□ -1.09
UBE4B-210ENST00000488228 PRR20EP86478 221 aa8.26□□□□□ -1.09
UBE4B-210ENST00000488228 PRR20CP86479 221 aa8.26□□□□□ -1.09
UBE4B-210ENST00000488228 PRR20DP86480 221 aa8.26□□□□□ -1.09
UBE4B-210ENST00000488228 PRR20BP86481 221 aa8.26□□□□□ -1.09
UBE4B-210ENST00000488228 PRR20AP86496 221 aa8.26□□□□□ -1.09
UBE4B-210ENST00000488228 RAB31Q13636 194 aa8.26□□□□□ -1.09
UBE4B-210ENST00000488228 ODF3L2Q3SX64 289 aa8.26□□□□□ -1.09
UBE4B-210ENST00000488228 PATE2Q6UY27 113 aa8.26□□□□□ -1.09
UBE4B-210ENST00000488228 SIGLEC15Q6ZMC9 328 aa8.26□□□□□ -1.09
UBE4B-210ENST00000488228 WFDC3Q8IUB2 231 aa8.26□□□□□ -1.09
UBE4B-210ENST00000488228 FAM24BQ8N5W8 94 aa8.26□□□□□ -1.09
UBE4B-210ENST00000488228 WDR61Q9GZS3 305 aaKnown RBP8.26□□□□□ -1.09
UBE4B-210ENST00000488228 SLC25A32Q9H2D1 315 aa8.26□□□□□ -1.09
UBE4B-210ENST00000488228 MS4A6AQ9H2W1 248 aa8.26□□□□□ -1.09
UBE4B-210ENST00000488228 UBQLN2Q9UHD9 624 aa8.26□□□□□ -1.09
UBE4B-210ENST00000488228 TNFSF18Q9UNG2 199 aa8.26□□□□□ -1.09
UBE4B-210ENST00000488228 PXMP4Q9Y6I8 212 aa8.26□□□□□ -1.09
UBE4B-210ENST00000488228 AGRNO00468 2067 aa8.25□□□□□ -1.09
UBE4B-210ENST00000488228 TENM3Q9P273 2699 aa8.25□□□□□ -1.09
UBE4B-210ENST00000488228 A0A1B0GVG6 124 aa8.25□□□□□ -1.09
UBE4B-210ENST00000488228 HELTA6NFD8 242 aa8.25□□□□□ -1.09
UBE4B-210ENST00000488228 ARPC5O15511 151 aa8.25□□□□□ -1.09
UBE4B-210ENST00000488228 AP2S1P53680 142 aaPredicted RBP8.25□□□□□ -1.09
UBE4B-210ENST00000488228 PLP1P60201 277 aa8.25□□□□□ -1.09
UBE4B-210ENST00000488228 B2MP61769 119 aa8.25□□□□□ -1.09
UBE4B-210ENST00000488228 DEFB121Q5J5C9 76 aa8.25□□□□□ -1.09
UBE4B-210ENST00000488228 GCSAMLQ5JQS6 135 aa8.25□□□□□ -1.09
UBE4B-210ENST00000488228 SHANK2-AS3Q9BTD1 123 aa8.25□□□□□ -1.09
UBE4B-210ENST00000488228 RSG1Q9BU20 258 aa8.25□□□□□ -1.09
UBE4B-210ENST00000488228 SLC25A39Q9BZJ4 359 aaPredicted RBP8.25□□□□□ -1.09
UBE4B-210ENST00000488228 ARV1Q9H2C2 271 aa8.25□□□□□ -1.09
UBE4B-210ENST00000488228 SLC39A9Q9NUM3 307 aa8.25□□□□□ -1.09
UBE4B-210ENST00000488228 SMAD5-AS1Q9Y6J3 95 aa8.25□□□□□ -1.09
UBE4B-210ENST00000488228 COL7A1Q02388 2944 aa8.24□□□□□ -1.09
UBE4B-210ENST00000488228 ZNF98A6NK75 572 aa8.24□□□□□ -1.09
UBE4B-210ENST00000488228 MPDU1O75352 247 aa8.24□□□□□ -1.09
UBE4B-210ENST00000488228 CD5P06127 495 aa8.24□□□□□ -1.09
UBE4B-210ENST00000488228 IGHV4-30-4P0DP06 118 aa8.24□□□□□ -1.09
UBE4B-210ENST00000488228 RPL29P47914 159 aaKnown RBP8.24□□□□□ -1.09
UBE4B-210ENST00000488228 MORN5Q5VZ52 161 aa8.24□□□□□ -1.09
UBE4B-210ENST00000488228 OR8I2Q8N0Y5 310 aa8.24□□□□□ -1.09
UBE4B-210ENST00000488228 DEFB125Q8N687 156 aa8.24□□□□□ -1.09
UBE4B-210ENST00000488228 INO80EQ8NBZ0 244 aaPredicted RBP8.24□□□□□ -1.09
UBE4B-210ENST00000488228 TMEM37Q8WXS4 190 aa8.24□□□□□ -1.09
UBE4B-210ENST00000488228 ST6GAL2Q96JF0 529 aa8.24□□□□□ -1.09
UBE4B-210ENST00000488228 MAP6D1Q9H9H5 199 aa8.24□□□□□ -1.09
UBE4B-210ENST00000488228 C19orf73Q9NVV2 129 aa8.24□□□□□ -1.09
UBE4B-210ENST00000488228 PFDN2Q9UHV9 154 aa8.24□□□□□ -1.09
UBE4B-210ENST00000488228 RFNGQ9Y644 331 aa8.24□□□□□ -1.09
UBE4B-210ENST00000488228 OR11H12B2RN74 326 aa8.23□□□□□ -1.09
UBE4B-210ENST00000488228 DNASE2O00115 360 aaPredicted RBP8.23□□□□□ -1.09
UBE4B-210ENST00000488228 IFNA5P01569 189 aa8.23□□□□□ -1.09
UBE4B-210ENST00000488228 ZNF124Q15973 351 aa8.23□□□□□ -1.09
UBE4B-210ENST00000488228 C1orf194Q5T5A4 169 aa8.23□□□□□ -1.09
UBE4B-210ENST00000488228 PXDC1Q5TGL8 231 aa8.23□□□□□ -1.09
UBE4B-210ENST00000488228 C10orf113Q5VZT2 155 aa8.23□□□□□ -1.09
UBE4B-210ENST00000488228 LINC00305Q7Z4B0 112 aa8.23□□□□□ -1.09
UBE4B-210ENST00000488228 ZNF709Q8N972 641 aa8.23□□□□□ -1.09
UBE4B-210ENST00000488228 OR11H4Q8NGC9 324 aa8.23□□□□□ -1.09
UBE4B-210ENST00000488228 DCANP1Q8TF63 244 aa8.23□□□□□ -1.09
UBE4B-210ENST00000488228 SRD5A3Q9H8P0 318 aa8.23□□□□□ -1.09
UBE4B-210ENST00000488228 NRN1Q9NPD7 142 aa8.23□□□□□ -1.09
UBE4B-210ENST00000488228 KCNIP2Q9NS61 270 aa8.23□□□□□ -1.09
UBE4B-210ENST00000488228 K7EQG2 157 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms