RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, human

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCB-208	ENST00000487674	RABL2B	Q9UNT1	228 aa		6.11	□□□□□ -1.43
PRKCB-208	ENST00000487674	RFNG	Q9Y644	331 aa		6.11	□□□□□ -1.43
PRKCB-208	ENST00000487674	PCLO	Q9Y6V0	5065 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	PRSS29P	A6NIE9	313 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	ZFP92	A6NM28	416 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	SOCS3	O14543	225 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	FABP1	P07148	127 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	ID1	P41134	155 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	EMP1	P54849	157 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	ATP5I	P56385	69 aa	Predicted RBP	6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	SUPT4H1	P63272	117 aa	Known RBP	6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	SRPX	P78539	464 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	IL18	Q14116	193 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	ZNF79	Q15937	498 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	C1orf194	Q5T5A4	169 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	GDF5OS	Q5U4N7	250 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	SAMD13	Q5VXD3	122 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	SPATA31B1P	Q5VZV4	182 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	ZNF709	Q8N972	641 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	COQ8A	Q8NI60	647 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	SLC35E1	Q96K37	410 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	SCGB3A2	Q96PL1	93 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	WDR12	Q9GZL7	423 aa	Known RBP	6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	RBKS	Q9H477	322 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	PRR13	Q9NZ81	148 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	KCNIP3	Q9Y2W7	256 aa		6.1	□□□□□ -1.43
PRKCB-208	ENST00000487674	IGKV1D-37	A0A075B6S9	117 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	IGHV3OR16-12	A0A075B7B8	117 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	PIGBOS1	A0A0B4J2F0	54 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	ANKRD20A5P	A0PJZ0	165 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674		H3BS24	57 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	ISLR	O14498	428 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	CTDSP2	O14595	271 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	RTL8C	O15255	209 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	IGKV3-20	P01619	116 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	MED14OS	P0DP75	135 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	ANXA3	P12429	323 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	GPX4	P36969	197 aa	Predicted RBP	6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	DEFB1	P60022	68 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	LYZ	P61626	148 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	ZNF90	Q03938	601 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	GAMT	Q14353	236 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	SPCS2	Q15005	226 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	LGALS9B	Q3B8N2	356 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	UBE2DNL	Q8IWF7	75 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	DIRAS2	Q96HU8	199 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	LINC00052	Q96N35	136 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	CCDC59	Q9P031	241 aa	Known RBP	6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	DKK2	Q9UBU2	259 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	SCP2D1	Q9UJQ7	156 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	GOLT1B	Q9Y3E0	138 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	FAT2	Q9NYQ8	4349 aa		6.09	□□□□□ -1.43
PRKCB-208	ENST00000487674	PKHD1	P08F94	4074 aa		6.09	□□□□□ -1.44
PRKCB-208	ENST00000487674	SNRPGP15	A8MWD9	76 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674		M0R2N4	97 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	IFNA21	P01568	189 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	HBE1	P02100	147 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	AKR1C4	P17516	323 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	MEOX2	P50222	304 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	PAX9	P55771	341 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	FXYD7	P58549	80 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	PSG9	Q00887	426 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	OXA1L	Q15070	435 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	KRTAP19-4	Q3LI73	84 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	FAM222A	Q5U5X8	452 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	EBLN2	Q6P2I7	272 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	LYZL2	Q7Z4W2	148 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	GPR141	Q7Z602	305 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	OR8I2	Q8N0Y5	310 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	OR4B1	Q8NGF8	309 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	OR1S1	Q8NH92	325 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	PPP1R14B	Q96C90	147 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	TRGV9	Q99603	122 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	NIPSNAP3B	Q9BS92	247 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	MRPS26	Q9BYN8	205 aa	Known RBP	6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	SLC35B3	Q9H1N7	401 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	MCUB	Q9NWR8	336 aa		6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	RSL24D1	Q9UHA3	163 aa	Known RBP	6.08	□□□□□ -1.44
PRKCB-208	ENST00000487674	DNAH2	Q9P225	4427 aa		6.07	□□□□□ -1.44
PRKCB-208	ENST00000487674		A0A0J9YX75	114 aa		6.07	□□□□□ -1.44
PRKCB-208	ENST00000487674	LOC102723971	A0A1B0GUV8	181 aa		6.07	□□□□□ -1.44
PRKCB-208	ENST00000487674	DUXB	A0A1W2PPF3	345 aa		6.07	□□□□□ -1.44
PRKCB-208	ENST00000487674	CFD	P00746	253 aa	Predicted RBP	6.07	□□□□□ -1.44
PRKCB-208	ENST00000487674	ALDH3B2	P48448	385 aa		6.07	□□□□□ -1.44
PRKCB-208	ENST00000487674	RAB11A	P62491	216 aa		6.07	□□□□□ -1.44
PRKCB-208	ENST00000487674	OR2F1	Q13607	317 aa		6.07	□□□□□ -1.44
PRKCB-208	ENST00000487674	RNF212	Q495C1	297 aa		6.07	□□□□□ -1.44
PRKCB-208	ENST00000487674	FAM78B	Q5VT40	261 aa		6.07	□□□□□ -1.44
PRKCB-208	ENST00000487674		Q6ZR54	194 aa		6.07	□□□□□ -1.44
PRKCB-208	ENST00000487674	THAP8	Q8NA92	274 aa		6.07	□□□□□ -1.44
PRKCB-208	ENST00000487674	C7orf50	Q9BRJ6	194 aa	Known RBP	6.07	□□□□□ -1.44
PRKCB-208	ENST00000487674	RPRM	Q9NS64	109 aa		6.07	□□□□□ -1.44
PRKCB-208	ENST00000487674	YTHDF2	Q9Y5A9	579 aa	Known RBP	6.07	□□□□□ -1.44
PRKCB-208	ENST00000487674	NACA	E9PAV3	2078 aa		6.06	□□□□□ -1.44
PRKCB-208	ENST00000487674	IGLV2-18	A0A075B6J9	118 aa		6.06	□□□□□ -1.44
PRKCB-208	ENST00000487674	IGKV1OR2-108	A0A075B7D4	117 aa		6.06	□□□□□ -1.44
PRKCB-208	ENST00000487674		A8MTW9	85 aa		6.06	□□□□□ -1.44
PRKCB-208	ENST00000487674		F6UB75	175 aa		6.06	□□□□□ -1.44
PRKCB-208	ENST00000487674	PITX3	O75364	302 aa		6.06	□□□□□ -1.44
PRKCB-208	ENST00000487674	HTN3	P15516	51 aa		6.06	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms