RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 ELOA3CA0A087WX78 387 aaPredicted RBP10.05□□□□□ -0.8
COL4A6-207ENST00000487645 TAAR5O14804 337 aa10.05□□□□□ -0.8
COL4A6-207ENST00000487645 ARPC5O15511 151 aa10.05□□□□□ -0.8
COL4A6-207ENST00000487645 C1QBP02746 253 aa10.05□□□□□ -0.8
COL4A6-207ENST00000487645 APOHP02749 345 aaPredicted RBP10.05□□□□□ -0.8
COL4A6-207ENST00000487645 ORM2P19652 201 aa10.05□□□□□ -0.8
COL4A6-207ENST00000487645 ZNF266Q14584 549 aa10.05□□□□□ -0.8
COL4A6-207ENST00000487645 ZNF345Q14585 488 aa10.05□□□□□ -0.8
COL4A6-207ENST00000487645 OPCMLQ14982 345 aa10.05□□□□□ -0.8
COL4A6-207ENST00000487645 CD300EQ496F6 205 aaPredicted RBP10.05□□□□□ -0.8
COL4A6-207ENST00000487645 C1orf194Q5T5A4 169 aa10.05□□□□□ -0.8
COL4A6-207ENST00000487645 LAMTOR1Q6IAA8 161 aa10.05□□□□□ -0.8
COL4A6-207ENST00000487645 Q6ZRG5 221 aa10.05□□□□□ -0.8
COL4A6-207ENST00000487645 ZNF709Q8N972 641 aa10.05□□□□□ -0.8
COL4A6-207ENST00000487645 ST8SIA2Q92186 375 aa10.05□□□□□ -0.8
COL4A6-207ENST00000487645 ARL6Q9H0F7 186 aa10.05□□□□□ -0.8
COL4A6-207ENST00000487645 KCNIP2Q9NS61 270 aa10.05□□□□□ -0.8
COL4A6-207ENST00000487645 IGHV3-49A0A0A0MS15 119 aa10.04□□□□□ -0.8
COL4A6-207ENST00000487645 A0A0D9SG52 128 aa10.04□□□□□ -0.8
COL4A6-207ENST00000487645 C17orf112F2Z3M2 114 aa10.04□□□□□ -0.8
COL4A6-207ENST00000487645 BUB3O43684 328 aa10.04□□□□□ -0.8
COL4A6-207ENST00000487645 FAM90A2PQ658T7 463 aa10.04□□□□□ -0.8
COL4A6-207ENST00000487645 C16orf54Q6UWD8 224 aa10.04□□□□□ -0.8
COL4A6-207ENST00000487645 RBPMS2Q6ZRY4 209 aaKnown RBP10.04□□□□□ -0.8
COL4A6-207ENST00000487645 KCNRGQ8N5I3 272 aa10.04□□□□□ -0.8
COL4A6-207ENST00000487645 STPG3Q8N7X2 389 aa10.04□□□□□ -0.8
COL4A6-207ENST00000487645 OR1B1Q8NGR6 318 aa10.04□□□□□ -0.8
COL4A6-207ENST00000487645 RNF2Q99496 336 aa10.04□□□□□ -0.8
COL4A6-207ENST00000487645 DNAJC4Q9NNZ3 241 aa10.04□□□□□ -0.8
COL4A6-207ENST00000487645 SLC39A9Q9NUM3 307 aa10.04□□□□□ -0.8
COL4A6-207ENST00000487645 RNF24Q9Y225 148 aa10.04□□□□□ -0.8
COL4A6-207ENST00000487645 IGHV3OR16-13A0A075B7E8 117 aa10.03□□□□□ -0.8
COL4A6-207ENST00000487645 BORCS7-ASMTA0A0B4J1R7 106 aa10.03□□□□□ -0.8
COL4A6-207ENST00000487645 IGHV3-74A0A0B4J1X5 117 aa10.03□□□□□ -0.8
COL4A6-207ENST00000487645 IZUMO1RA6ND01 250 aa10.03□□□□□ -0.8
COL4A6-207ENST00000487645 ZNF785A8K8V0 405 aa10.03□□□□□ -0.8
COL4A6-207ENST00000487645 TSPAN4O14817 238 aa10.03□□□□□ -0.8
COL4A6-207ENST00000487645 OR5G3P0C626 314 aa10.03□□□□□ -0.8
COL4A6-207ENST00000487645 KRTAP10-11P60412 298 aa10.03□□□□□ -0.8
COL4A6-207ENST00000487645 B2MP61769 119 aa10.03□□□□□ -0.8
COL4A6-207ENST00000487645 MIC13Q5XKP0 118 aa10.03□□□□□ -0.8
COL4A6-207ENST00000487645 PATE2Q6UY27 113 aa10.03□□□□□ -0.8
COL4A6-207ENST00000487645 TMEM61Q8N0U2 210 aa10.03□□□□□ -0.8
COL4A6-207ENST00000487645 OR1L4Q8NGR5 311 aa10.03□□□□□ -0.8
COL4A6-207ENST00000487645 PPP1R14BQ96C90 147 aa10.03□□□□□ -0.8
COL4A6-207ENST00000487645 HYLS1Q96M11 299 aa10.03□□□□□ -0.8
COL4A6-207ENST00000487645 HIGD1AQ9Y241 93 aa10.03□□□□□ -0.8
COL4A6-207ENST00000487645 ZNF256Q9Y2P7 627 aaPredicted RBP10.03□□□□□ -0.8
COL4A6-207ENST00000487645 PXMP4Q9Y6I8 212 aa10.03□□□□□ -0.8
COL4A6-207ENST00000487645 IGHV3-66A0A0C4DH42 116 aa10.02□□□□□ -0.81
COL4A6-207ENST00000487645 COX7A2P2O60397 106 aa10.02□□□□□ -0.81
COL4A6-207ENST00000487645 JTBO76095 146 aa10.02□□□□□ -0.81
COL4A6-207ENST00000487645 TCF24Q7RTU0 167 aa10.02□□□□□ -0.81
COL4A6-207ENST00000487645 GATAD1Q8WUU5 269 aa10.02□□□□□ -0.81
COL4A6-207ENST00000487645 GLMPQ8WWB7 406 aa10.02□□□□□ -0.81
COL4A6-207ENST00000487645 PFDN5Q99471 154 aa10.02□□□□□ -0.81
COL4A6-207ENST00000487645 SPAG8Q99932 426 aaPredicted RBP10.02□□□□□ -0.81
COL4A6-207ENST00000487645 SLC25A39Q9BZJ4 359 aaPredicted RBP10.02□□□□□ -0.81
COL4A6-207ENST00000487645 ARV1Q9H2C2 271 aa10.02□□□□□ -0.81
COL4A6-207ENST00000487645 TIMM9Q9Y5J7 89 aa10.02□□□□□ -0.81
COL4A6-207ENST00000487645 HELTA6NFD8 242 aa10.01□□□□□ -0.81
COL4A6-207ENST00000487645 ZNF98A6NK75 572 aa10.01□□□□□ -0.81
COL4A6-207ENST00000487645 GP9P14770 177 aa10.01□□□□□ -0.81
COL4A6-207ENST00000487645 CXCL2P19875 107 aa10.01□□□□□ -0.81
COL4A6-207ENST00000487645 PAFAH1B2P68402 229 aa10.01□□□□□ -0.81
COL4A6-207ENST00000487645 C10orf113Q5VZT2 155 aa10.01□□□□□ -0.81
COL4A6-207ENST00000487645 TMEM37Q8WXS4 190 aa10.01□□□□□ -0.81
COL4A6-207ENST00000487645 GPR82Q96P67 336 aa10.01□□□□□ -0.81
COL4A6-207ENST00000487645 ARPC5LQ9BPX5 153 aa10.01□□□□□ -0.81
COL4A6-207ENST00000487645 SHANK2-AS3Q9BTD1 123 aa10.01□□□□□ -0.81
COL4A6-207ENST00000487645 DOK5Q9P104 306 aa10.01□□□□□ -0.81
COL4A6-207ENST00000487645 TRAV2A0A0B4J234 112 aa10□□□□□ -0.81
COL4A6-207ENST00000487645 H3BRN7 92 aa10□□□□□ -0.81
COL4A6-207ENST00000487645 GUCA2BQ16661 112 aa10□□□□□ -0.81
COL4A6-207ENST00000487645 RPL7L1Q6DKI1 246 aaKnown RBP10□□□□□ -0.81
COL4A6-207ENST00000487645 LINC00305Q7Z4B0 112 aa10□□□□□ -0.81
COL4A6-207ENST00000487645 OR8I2Q8N0Y5 310 aa10□□□□□ -0.81
COL4A6-207ENST00000487645 GNPNAT1Q96EK6 184 aaPredicted RBP10□□□□□ -0.81
COL4A6-207ENST00000487645 RSG1Q9BU20 258 aa10□□□□□ -0.81
COL4A6-207ENST00000487645 CYTL1Q9NRR1 136 aa10□□□□□ -0.81
COL4A6-207ENST00000487645 SELENOKQ9Y6D0 94 aa10□□□□□ -0.81
COL4A6-207ENST00000487645 RPL11P62913 178 aaKnown RBP9.99□□□□□ -0.81
COL4A6-207ENST00000487645 SERF2P84101 59 aa9.99□□□□□ -0.81
COL4A6-207ENST00000487645 CD300CQ08708 224 aa9.99□□□□□ -0.81
COL4A6-207ENST00000487645 LGALSLQ3ZCW2 172 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-207ENST00000487645 SIGLEC15Q6ZMC9 328 aa9.99□□□□□ -0.81
COL4A6-207ENST00000487645 TMUB2Q71RG4 321 aa9.99□□□□□ -0.81
COL4A6-207ENST00000487645 UHRF2Q96PU4 802 aa9.99□□□□□ -0.81
COL4A6-207ENST00000487645 PSMG3Q9BT73 122 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-207ENST00000487645 KANTRA0A1W2PQU2 76 aa9.98□□□□□ -0.81
COL4A6-207ENST00000487645 OR4C46A6NHA9 309 aa9.98□□□□□ -0.81
COL4A6-207ENST00000487645 DNASE2O00115 360 aaPredicted RBP9.98□□□□□ -0.81
COL4A6-207ENST00000487645 ATP6V0CP27449 155 aa9.98□□□□□ -0.81
COL4A6-207ENST00000487645 CMC4P56277 68 aaPredicted RBP9.98□□□□□ -0.81
COL4A6-207ENST00000487645 ZFP69Q49AA0 526 aa9.98□□□□□ -0.81
COL4A6-207ENST00000487645 FFAR4Q5NUL3 377 aa9.98□□□□□ -0.81
COL4A6-207ENST00000487645 GTSCR1Q86UQ5 136 aa9.98□□□□□ -0.81
COL4A6-207ENST00000487645 HSD17B11Q8NBQ5 300 aa9.98□□□□□ -0.81
COL4A6-207ENST00000487645 OR2G3Q8NGZ4 309 aa9.98□□□□□ -0.81
COL4A6-207ENST00000487645 SCRT1Q9BWW7 348 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms