RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 KIF1BO60333 1816 aa0.59□□□□□ -2.32
GCFC2-209ENST00000486016 FBN2P35556 2912 aa0.58□□□□□ -2.32
GCFC2-209ENST00000486016 A8MWV9 139 aa0.58□□□□□ -2.32
GCFC2-209ENST00000486016 IFNA7P01567 189 aa0.58□□□□□ -2.32
GCFC2-209ENST00000486016 C1QBP02746 253 aa0.58□□□□□ -2.32
GCFC2-209ENST00000486016 MRPS15P82914 257 aaKnown RBP0.58□□□□□ -2.32
GCFC2-209ENST00000486016 TMED2Q15363 201 aa0.58□□□□□ -2.32
GCFC2-209ENST00000486016 BCL2L15Q5TBC7 163 aa0.58□□□□□ -2.32
GCFC2-209ENST00000486016 OR2T35Q8NGX2 323 aa0.58□□□□□ -2.32
GCFC2-209ENST00000486016 TMEM254Q8TBM7 123 aa0.58□□□□□ -2.32
GCFC2-209ENST00000486016 PATE1Q8WXA2 126 aa0.58□□□□□ -2.32
GCFC2-209ENST00000486016 GPER1Q99527 375 aa0.58□□□□□ -2.32
GCFC2-209ENST00000486016 SLC25A21Q9BQT8 299 aaPredicted RBP0.58□□□□□ -2.32
GCFC2-209ENST00000486016 LINC00467Q9BRT7 94 aa0.58□□□□□ -2.32
GCFC2-209ENST00000486016 MIA2Q96PC5 1412 aa0.57□□□□□ -2.32
GCFC2-209ENST00000486016 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.57□□□□□ -2.32
GCFC2-209ENST00000486016 TCRBV4S1A1TA0A5B7 111 aa0.57□□□□□ -2.32
GCFC2-209ENST00000486016 TMEM256-PLSCR3K7ERE1 68 aa0.57□□□□□ -2.32
GCFC2-209ENST00000486016 M0R378 163 aa0.57□□□□□ -2.32
GCFC2-209ENST00000486016 CCL25O15444 150 aa0.57□□□□□ -2.32
GCFC2-209ENST00000486016 CCL16O15467 120 aa0.57□□□□□ -2.32
GCFC2-209ENST00000486016 CST8O60676 142 aa0.57□□□□□ -2.32
GCFC2-209ENST00000486016 HOXA6P31267 233 aa0.57□□□□□ -2.32
GCFC2-209ENST00000486016 ROMO1P60602 79 aa0.57□□□□□ -2.32
GCFC2-209ENST00000486016 NCALDP61601 193 aa0.57□□□□□ -2.32
GCFC2-209ENST00000486016 UBE2BP63146 152 aa0.57□□□□□ -2.32
GCFC2-209ENST00000486016 SPRNQ5BIV9 151 aa0.57□□□□□ -2.32
GCFC2-209ENST00000486016 FAM74A1Q5RGS3 127 aa0.57□□□□□ -2.32
GCFC2-209ENST00000486016 ST6GALNAC3Q8NDV1 305 aa0.57□□□□□ -2.32
GCFC2-209ENST00000486016 OR10K1Q8NGX5 313 aa0.57□□□□□ -2.32
GCFC2-209ENST00000486016 BORCS5Q969J3 196 aa0.57□□□□□ -2.32
GCFC2-209ENST00000486016 ARL5AQ9Y689 179 aa0.57□□□□□ -2.32
GCFC2-209ENST00000486016 TNRC6AQ8NDV7 1962 aaKnown RBP0.57□□□□□ -2.32
GCFC2-209ENST00000486016 SCN3AQ9NY46 2000 aa0.57□□□□□ -2.32
GCFC2-209ENST00000486016 OBSL1O75147 1896 aa0.56□□□□□ -2.32
GCFC2-209ENST00000486016 TRBV6-4A0A1B0GX49 114 aa0.56□□□□□ -2.32
GCFC2-209ENST00000486016 B4DSR2 109 aa0.56□□□□□ -2.32
GCFC2-209ENST00000486016 DNAL4O96015 105 aa0.56□□□□□ -2.32
GCFC2-209ENST00000486016 DHRS4L2Q6PKH6 230 aa0.56□□□□□ -2.32
GCFC2-209ENST00000486016 EXOC3-AS1Q8N2X6 119 aa0.56□□□□□ -2.32
GCFC2-209ENST00000486016 PXT1Q8NFP0 134 aa0.56□□□□□ -2.32
GCFC2-209ENST00000486016 CANT1Q8WVQ1 401 aa0.56□□□□□ -2.32
GCFC2-209ENST00000486016 CEP19Q96LK0 163 aa0.56□□□□□ -2.32
GCFC2-209ENST00000486016 MED29Q9NX70 200 aa0.56□□□□□ -2.32
GCFC2-209ENST00000486016 TAS2R7Q9NYW3 318 aa0.56□□□□□ -2.32
GCFC2-209ENST00000486016 CAMSAP1Q5T5Y3 1602 aa0.56□□□□□ -2.32
GCFC2-209ENST00000486016 MYH7BA7E2Y1 1941 aa0.56□□□□□ -2.32
GCFC2-209ENST00000486016 MCM3APO60318 1980 aa0.56□□□□□ -2.32
GCFC2-209ENST00000486016 GGCTO75223 188 aaKnown RBP0.55□□□□□ -2.32
GCFC2-209ENST00000486016 BANF1O75531 89 aa0.55□□□□□ -2.32
GCFC2-209ENST00000486016 DYNLT3P51808 116 aa0.55□□□□□ -2.32
GCFC2-209ENST00000486016 ARF6P62330 175 aa0.55□□□□□ -2.32
GCFC2-209ENST00000486016 MYL5Q02045 173 aa0.55□□□□□ -2.32
GCFC2-209ENST00000486016 HACD4Q5VWC8 232 aa0.55□□□□□ -2.32
GCFC2-209ENST00000486016 C4orf22Q6V702 233 aa0.55□□□□□ -2.32
GCFC2-209ENST00000486016 TEX37Q96LM6 180 aa0.55□□□□□ -2.32
GCFC2-209ENST00000486016 TP53RKQ96S44 253 aa0.55□□□□□ -2.32
GCFC2-209ENST00000486016 AMELYQ99218 206 aa0.55□□□□□ -2.32
GCFC2-209ENST00000486016 NPCDR1Q9BY65 106 aa0.55□□□□□ -2.32
GCFC2-209ENST00000486016 PCTPQ9UKL6 214 aa0.55□□□□□ -2.32
GCFC2-209ENST00000486016 PYCARDQ9ULZ3 195 aa0.55□□□□□ -2.32
GCFC2-209ENST00000486016 LY96Q9Y6Y9 160 aa0.55□□□□□ -2.32
GCFC2-209ENST00000486016 SCN8AQ9UQD0 1980 aa0.55□□□□□ -2.32
GCFC2-209ENST00000486016 TNS3Q68CZ2 1445 aa0.55□□□□□ -2.32
GCFC2-209ENST00000486016 ARHGEF11O15085 1522 aa0.54□□□□□ -2.32
GCFC2-209ENST00000486016 TRAV10A0A0B4J240 114 aa0.54□□□□□ -2.32
GCFC2-209ENST00000486016 IGHV1-58A0A0C4DH39 117 aa0.54□□□□□ -2.32
GCFC2-209ENST00000486016 TLCD2A6NGC4 264 aa0.54□□□□□ -2.32
GCFC2-209ENST00000486016 NDUFC2O95298 119 aa0.54□□□□□ -2.32
GCFC2-209ENST00000486016 CD2P06729 351 aa0.54□□□□□ -2.32
GCFC2-209ENST00000486016 HLA-EP13747 358 aa0.54□□□□□ -2.32
GCFC2-209ENST00000486016 NFYBP25208 207 aa0.54□□□□□ -2.32
GCFC2-209ENST00000486016 DSCR4P56555 118 aaPredicted RBP0.54□□□□□ -2.32
GCFC2-209ENST00000486016 GNG5P63218 68 aa0.54□□□□□ -2.32
GCFC2-209ENST00000486016 PSG9Q00887 426 aa0.54□□□□□ -2.32
GCFC2-209ENST00000486016 EIF5AL1Q6IS14 154 aaKnown RBP0.54□□□□□ -2.32
GCFC2-209ENST00000486016 C2orf82Q6UX34 121 aa0.54□□□□□ -2.32
GCFC2-209ENST00000486016 LINC00322Q6ZN03 302 aaPredicted RBP0.54□□□□□ -2.32
GCFC2-209ENST00000486016 ZNF833PQ6ZTB9 187 aa0.54□□□□□ -2.32
GCFC2-209ENST00000486016 OR5D14Q8NGL3 314 aa0.54□□□□□ -2.32
GCFC2-209ENST00000486016 LINC00052Q96N35 136 aa0.54□□□□□ -2.32
GCFC2-209ENST00000486016 ORMDL1Q9P0S3 153 aa0.54□□□□□ -2.32
GCFC2-209ENST00000486016 PRNDQ9UKY0 176 aa0.54□□□□□ -2.32
GCFC2-209ENST00000486016 E9PCH4 1651 aa0.53□□□□□ -2.32
GCFC2-209ENST00000486016 LAMB4A4D0S4 1761 aa0.53□□□□□ -2.32
GCFC2-209ENST00000486016 DUXBA0A1W2PPF3 345 aa0.53□□□□□ -2.32
GCFC2-209ENST00000486016 E7EUB6 86 aa0.53□□□□□ -2.32
GCFC2-209ENST00000486016 G3V2T6 193 aa0.53□□□□□ -2.32
GCFC2-209ENST00000486016 AIPO00170 330 aa0.53□□□□□ -2.32
GCFC2-209ENST00000486016 NCR3O14931 201 aa0.53□□□□□ -2.32
GCFC2-209ENST00000486016 NUPR1O60356 82 aa0.53□□□□□ -2.32
GCFC2-209ENST00000486016 KLF7O75840 302 aaPredicted RBP0.53□□□□□ -2.32
GCFC2-209ENST00000486016 ATG12O94817 140 aa0.53□□□□□ -2.32
GCFC2-209ENST00000486016 CRHP06850 196 aa0.53□□□□□ -2.32
GCFC2-209ENST00000486016 BASP1P80723 227 aaKnown RBP0.53□□□□□ -2.32
GCFC2-209ENST00000486016 C1orf134Q5TEV5 83 aa0.53□□□□□ -2.32
GCFC2-209ENST00000486016 KRTAP26-1Q6PEX3 210 aa0.53□□□□□ -2.32
GCFC2-209ENST00000486016 PATE2Q6UY27 113 aa0.53□□□□□ -2.32
GCFC2-209ENST00000486016 Q8N6K4 173 aa0.53□□□□□ -2.32
GCFC2-209ENST00000486016 TMEM14CQ9P0S9 112 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms