RNA–Protein interactions for RNA: ENST00000485450.5

USP4-211, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 3,541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-211ENST00000485450 H3BUT2 72 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 M0R135 149 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 IGKV1D-12P01611 117 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 HTR1DP28221 377 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 ERVK11-1P61568 191 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 RNF125Q96EQ8 232 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 ZNF799Q96GE5 643 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 TECRQ9NZ01 308 aaKnown RBP6.19□□□□□ -1.42
USP4-211ENST00000485450 KAAG1Q9UBP8 84 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 A6NDN8 102 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 SYS1-DBNDD2H3BUS1 97 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 SPINK4O60575 86 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 IGHV1-46P01743 117 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 HBZP02008 142 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 SCTP09683 121 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 SLC25A16P16260 332 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 ZNF718Q3SXZ3 478 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 TMEM155Q4W5P6 130 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 C5orf47Q569G3 176 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 RASL11AQ6T310 242 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 Q8N7P7 452 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 WIPF2Q8TF74 440 aaPredicted RBP6.19□□□□□ -1.42
USP4-211ENST00000485450 ARFGEF3Q5TH69 2177 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 TRAV38-1A0A0B4J264 116 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 A0A0G2JLM5 398 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 A0A1W2PPM0 123 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 SMIM27A0A1W2PRY6 76 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 A1L4Q6 167 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 NPIPB5A8MRT5 1133 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 CCDC179H3BU77 68 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 RBM11P57052 281 aaKnown RBP6.18□□□□□ -1.42
USP4-211ENST00000485450 RPL24P83731 157 aaKnown RBP6.18□□□□□ -1.42
USP4-211ENST00000485450 PLP2Q04941 152 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 KRTAP21-3Q3LHN1 58 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 ADAMTSL5Q6ZMM2 481 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 C8orf46Q8TAG6 207 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 CCL19Q99731 98 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 TMEM191AQ9H0A3 160 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 VCX2Q9H322 139 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 SAP30LQ9HAJ7 183 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 OSTCQ9NRP0 149 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 MPC1Q9Y5U8 109 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 NGFP01138 241 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 COX8AP10176 69 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 XGP55808 180 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 RPL31P62899 125 aaKnown RBP6.18□□□□□ -1.42
USP4-211ENST00000485450 HIST2H2BCQ6DN03 193 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 OR2D2Q9H210 308 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 LRBAP50851 2863 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 BAHCC1Q9P281 2608 aa6.18□□□□□ -1.42
USP4-211ENST00000485450 HIST1H1EP10412 219 aaKnown RBP6.17□□□□□ -1.42
USP4-211ENST00000485450 USF1P22415 310 aaPredicted RBP6.17□□□□□ -1.42
USP4-211ENST00000485450 WFDC2Q14508 124 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 FA2HQ7L5A8 372 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 WDR86Q86TI4 376 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 OR51H1Q8NH63 302 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 OR2T6Q8NHC8 308 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 C20orf78Q9BR46 151 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 TMEM133Q9H2Q1 129 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 SPCS1Q9Y6A9 102 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 IGKV1-6A0A0C4DH72 117 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 C5orf49A4QMS7 147 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 GNG3P63215 75 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 RNASEKQ6P5S7 137 aaKnown RBP6.17□□□□□ -1.42
USP4-211ENST00000485450 KCNIP1Q9NZI2 227 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 DSCAML1Q8TD84 2053 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 KIR2DS1A0A191URI9 304 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 IZUMO1RA6ND01 250 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 CXorf1O96002 111 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 PATE4P0C8F1 98 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 ARL14EPLP0DKL9 152 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 KIR2DS4P43632 304 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 SLC35B1P78383 322 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 KIR2DS1Q14954 304 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 BPIFA4PQ86YQ2 179 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 PTH2Q96A98 100 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 PKIBQ9C010 78 aa6.17□□□□□ -1.42
USP4-211ENST00000485450 YTHDF2Q9Y5A9 579 aaKnown RBP6.17□□□□□ -1.42
USP4-211ENST00000485450 HELTA6NFD8 242 aa6.16□□□□□ -1.42
USP4-211ENST00000485450 F5H5K5 113 aa6.16□□□□□ -1.42
USP4-211ENST00000485450 FGF6P10767 208 aa6.16□□□□□ -1.42
USP4-211ENST00000485450 FABP6P51161 128 aa6.16□□□□□ -1.42
USP4-211ENST00000485450 GCSAMLQ5JQS6 135 aa6.16□□□□□ -1.42
USP4-211ENST00000485450 FAM162BQ5T6X4 162 aa6.16□□□□□ -1.42
USP4-211ENST00000485450 SH2D6Q7Z4S9 175 aa6.16□□□□□ -1.42
USP4-211ENST00000485450 OSR1Q8TAX0 266 aaPredicted RBP6.16□□□□□ -1.42
USP4-211ENST00000485450 NRGNQ92686 78 aa6.16□□□□□ -1.42
USP4-211ENST00000485450 BORCS8Q96FH0 119 aa6.16□□□□□ -1.42
USP4-211ENST00000485450 URB1-AS1Q96HZ7 61 aa6.16□□□□□ -1.42
USP4-211ENST00000485450 TRAPPC2LQ9UL33 140 aa6.16□□□□□ -1.42
USP4-211ENST00000485450 FAM90A10PA6NDY2 464 aa6.16□□□□□ -1.42
USP4-211ENST00000485450 FAM90A18PA6NE21 464 aa6.16□□□□□ -1.42
USP4-211ENST00000485450 FAM90A16PA6NEW6 464 aa6.16□□□□□ -1.42
USP4-211ENST00000485450 FAM90A20PA6NIJ5 464 aa6.16□□□□□ -1.42
USP4-211ENST00000485450 FAM90A8PA6NJQ4 464 aa6.16□□□□□ -1.42
USP4-211ENST00000485450 FAM90A7PA6NKC0 464 aa6.16□□□□□ -1.42
USP4-211ENST00000485450 FAM90A22PA8MWA6 464 aa6.16□□□□□ -1.42
USP4-211ENST00000485450 FAM90A12PA8MX19 464 aa6.16□□□□□ -1.42
USP4-211ENST00000485450 FAM90A5PA8MXJ8 464 aa6.16□□□□□ -1.42
USP4-211ENST00000485450 FAM90A23PA8MXZ1 464 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms