RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 KLHL30-AS1Q8NEE0 82 aa11.14□□□□□ -0.63
LRIF1-202ENST00000485275 LRRC20Q8TCA0 184 aa11.14□□□□□ -0.63
LRIF1-202ENST00000485275 GATAD1Q8WUU5 269 aa11.14□□□□□ -0.63
LRIF1-202ENST00000485275 SFT2D1Q8WV19 159 aa11.14□□□□□ -0.63
LRIF1-202ENST00000485275 C4orf3Q8WVX3 66 aa11.14□□□□□ -0.63
LRIF1-202ENST00000485275 MBD3L1Q8WWY6 194 aa11.14□□□□□ -0.63
LRIF1-202ENST00000485275 FAM167A-AS1Q96KT0 104 aa11.14□□□□□ -0.63
LRIF1-202ENST00000485275 SLC25A2Q9BXI2 301 aa11.14□□□□□ -0.63
LRIF1-202ENST00000485275 ACTR3CQ9C0K3 210 aaPredicted RBP11.14□□□□□ -0.63
LRIF1-202ENST00000485275 MAP1LC3BQ9GZQ8 125 aa11.14□□□□□ -0.63
LRIF1-202ENST00000485275 A0A1W2PRX2 142 aa11.13□□□□□ -0.63
LRIF1-202ENST00000485275 FABP1P07148 127 aa11.13□□□□□ -0.63
LRIF1-202ENST00000485275 RAB14P61106 215 aa11.13□□□□□ -0.63
LRIF1-202ENST00000485275 FAM209BQ5JX69 171 aa11.13□□□□□ -0.63
LRIF1-202ENST00000485275 C8orf86Q6ZUL3 223 aa11.13□□□□□ -0.63
LRIF1-202ENST00000485275 OR1L4Q8NGR5 311 aa11.13□□□□□ -0.63
LRIF1-202ENST00000485275 WFDC12Q8WWY7 111 aa11.13□□□□□ -0.63
LRIF1-202ENST00000485275 PFDN5Q99471 154 aa11.13□□□□□ -0.63
LRIF1-202ENST00000485275 SLC25A39Q9BZJ4 359 aaPredicted RBP11.13□□□□□ -0.63
LRIF1-202ENST00000485275 TMPRSS5Q9H3S3 457 aa11.13□□□□□ -0.63
LRIF1-202ENST00000485275 H3BRN7 92 aa11.13□□□□□ -0.63
LRIF1-202ENST00000485275 ZNF207O43670 478 aaKnown RBP11.13□□□□□ -0.63
LRIF1-202ENST00000485275 GGCTO75223 188 aaKnown RBP11.13□□□□□ -0.63
LRIF1-202ENST00000485275 STAG3L2P0CL84 134 aa11.13□□□□□ -0.63
LRIF1-202ENST00000485275 STAG3L3P0CL85 134 aa11.13□□□□□ -0.63
LRIF1-202ENST00000485275 RHOBP62745 196 aa11.13□□□□□ -0.63
LRIF1-202ENST00000485275 BLOC1S1P78537 153 aa11.13□□□□□ -0.63
LRIF1-202ENST00000485275 RELQ04864 619 aaPredicted RBP11.13□□□□□ -0.63
LRIF1-202ENST00000485275 TMEM190Q8WZ59 177 aa11.13□□□□□ -0.63
LRIF1-202ENST00000485275 HIGD1AQ9Y241 93 aa11.13□□□□□ -0.63
LRIF1-202ENST00000485275 ELOA3CA0A087WX78 387 aaPredicted RBP11.12□□□□□ -0.63
LRIF1-202ENST00000485275 A0A1W2PPV4 95 aa11.12□□□□□ -0.63
LRIF1-202ENST00000485275 NDUFA4O00483 81 aa11.12□□□□□ -0.63
LRIF1-202ENST00000485275 SCGB2A1O75556 95 aa11.12□□□□□ -0.63
LRIF1-202ENST00000485275 APOHP02749 345 aaPredicted RBP11.12□□□□□ -0.63
LRIF1-202ENST00000485275 ARL14EPLP0DKL9 152 aa11.12□□□□□ -0.63
LRIF1-202ENST00000485275 TRAV1-1A0A0B4J248 108 aa11.11□□□□□ -0.63
LRIF1-202ENST00000485275 HOXD3P31249 432 aaPredicted RBP11.11□□□□□ -0.63
LRIF1-202ENST00000485275 SLURP1P55000 103 aa11.11□□□□□ -0.63
LRIF1-202ENST00000485275 SHANK2-AS3Q9BTD1 123 aa11.11□□□□□ -0.63
LRIF1-202ENST00000485275 C20orf24Q9BUV8 137 aa11.11□□□□□ -0.63
LRIF1-202ENST00000485275 C19orf24Q9BVV8 132 aa11.11□□□□□ -0.63
LRIF1-202ENST00000485275 MRPL32Q9BYC8 188 aaKnown RBP11.11□□□□□ -0.63
LRIF1-202ENST00000485275 LINC00862A6NCI5 91 aa11.11□□□□□ -0.63
LRIF1-202ENST00000485275 HSPB1P04792 205 aaKnown RBP11.11□□□□□ -0.63
LRIF1-202ENST00000485275 PYYP10082 97 aa11.11□□□□□ -0.63
LRIF1-202ENST00000485275 AWAT1Q58HT5 328 aa11.11□□□□□ -0.63
LRIF1-202ENST00000485275 SLC7A5P1Q8MH63 180 aa11.11□□□□□ -0.63
LRIF1-202ENST00000485275 OR11H1Q8NG94 326 aa11.11□□□□□ -0.63
LRIF1-202ENST00000485275 RAX2Q96IS3 184 aa11.11□□□□□ -0.63
LRIF1-202ENST00000485275 TSSC4Q9Y5U2 329 aaPredicted RBP11.11□□□□□ -0.63
LRIF1-202ENST00000485275 IGHV3OR16-13A0A075B7E8 117 aa11.1□□□□□ -0.63
LRIF1-202ENST00000485275 IGHV3-49A0A0A0MS15 119 aa11.1□□□□□ -0.63
LRIF1-202ENST00000485275 IGHV3-74A0A0B4J1X5 117 aa11.1□□□□□ -0.63
LRIF1-202ENST00000485275 IGHV3-66A0A0C4DH42 116 aa11.1□□□□□ -0.63
LRIF1-202ENST00000485275 SNRPCP09234 159 aaKnown RBP11.1□□□□□ -0.63
LRIF1-202ENST00000485275 C8orf88P0DMB2 117 aa11.1□□□□□ -0.63
LRIF1-202ENST00000485275 GP9P14770 177 aa11.1□□□□□ -0.63
LRIF1-202ENST00000485275 RPEL1Q2QD12 228 aa11.1□□□□□ -0.63
LRIF1-202ENST00000485275 RABAC1Q9UI14 185 aa11.1□□□□□ -0.63
LRIF1-202ENST00000485275 ZNF98A6NK75 572 aa11.09□□□□□ -0.63
LRIF1-202ENST00000485275 NUDT19A8MXV4 375 aa11.09□□□□□ -0.63
LRIF1-202ENST00000485275 MRPS12O15235 138 aaKnown RBP11.09□□□□□ -0.63
LRIF1-202ENST00000485275 OR10J4P0C629 311 aa11.09□□□□□ -0.63
LRIF1-202ENST00000485275 SRSF3P84103 164 aaKnown RBP11.09□□□□□ -0.63
LRIF1-202ENST00000485275 FHL3Q13643 280 aa11.09□□□□□ -0.63
LRIF1-202ENST00000485275 TM4SF20Q53R12 229 aa11.09□□□□□ -0.63
LRIF1-202ENST00000485275 GPHB5Q86YW7 130 aa11.09□□□□□ -0.63
LRIF1-202ENST00000485275 U3KQE9 123 aa11.09□□□□□ -0.63
LRIF1-202ENST00000485275 A0A1B0GUS0 222 aa11.08□□□□□ -0.64
LRIF1-202ENST00000485275 ZNF320A2RRD8 509 aa11.08□□□□□ -0.64
LRIF1-202ENST00000485275 CRYBB3P26998 211 aa11.08□□□□□ -0.64
LRIF1-202ENST00000485275 SYNJ2BPP57105 145 aa11.08□□□□□ -0.64
LRIF1-202ENST00000485275 FOXL1Q12952 345 aa11.08□□□□□ -0.64
LRIF1-202ENST00000485275 C17orf77Q96MU5 243 aa11.08□□□□□ -0.64
LRIF1-202ENST00000485275 RNF2Q99496 336 aa11.08□□□□□ -0.64
LRIF1-202ENST00000485275 TECRQ9NZ01 308 aaKnown RBP11.08□□□□□ -0.64
LRIF1-202ENST00000485275 TMEM213A2RRL7 107 aa11.08□□□□□ -0.64
LRIF1-202ENST00000485275 LINC01619G3V211 115 aa11.08□□□□□ -0.64
LRIF1-202ENST00000485275 BUB3O43684 328 aa11.08□□□□□ -0.64
LRIF1-202ENST00000485275 OR7C2O60412 319 aa11.08□□□□□ -0.64
LRIF1-202ENST00000485275 GCHFRP30047 84 aa11.08□□□□□ -0.64
LRIF1-202ENST00000485275 KHDC3LQ587J8 217 aa11.08□□□□□ -0.64
LRIF1-202ENST00000485275 COMMD7Q86VX2 200 aa11.08□□□□□ -0.64
LRIF1-202ENST00000485275 OR1N2Q8NGR9 330 aa11.08□□□□□ -0.64
LRIF1-202ENST00000485275 FXYD5Q96DB9 178 aa11.08□□□□□ -0.64
LRIF1-202ENST00000485275 MED9Q9NWA0 146 aa11.08□□□□□ -0.64
LRIF1-202ENST00000485275 CXorf1O96002 111 aa11.07□□□□□ -0.64
LRIF1-202ENST00000485275 HBE1P02100 147 aa11.07□□□□□ -0.64
LRIF1-202ENST00000485275 KLF5Q13887 457 aaPredicted RBP11.07□□□□□ -0.64
LRIF1-202ENST00000485275 IL34Q6ZMJ4 242 aa11.07□□□□□ -0.64
LRIF1-202ENST00000485275 IQCF2Q8IXL9 164 aa11.07□□□□□ -0.64
LRIF1-202ENST00000485275 METTL26Q96S19 204 aa11.07□□□□□ -0.64
LRIF1-202ENST00000485275 SELENOKQ9Y6D0 94 aa11.07□□□□□ -0.64
LRIF1-202ENST00000485275 A8MWP6 167 aa11.06□□□□□ -0.64
LRIF1-202ENST00000485275 H3BQ15 152 aa11.06□□□□□ -0.64
LRIF1-202ENST00000485275 H3BTX0 84 aa11.06□□□□□ -0.64
LRIF1-202ENST00000485275 TAS2R45P59539 299 aa11.06□□□□□ -0.64
LRIF1-202ENST00000485275 NSUN5P1Q3KNT7 163 aa11.06□□□□□ -0.64
LRIF1-202ENST00000485275 PQLC2Q6ZP29 291 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms