RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 NPCDR1Q9BY65 106 aa9.34□□□□□ -0.91
SHROOM3-205ENST00000481002 TMEM231Q9H6L2 316 aa9.34□□□□□ -0.91
SHROOM3-205ENST00000481002 ZMAT5Q9UDW3 170 aaKnown RBP9.34□□□□□ -0.91
SHROOM3-205ENST00000481002 IGHV3OR16-13A0A075B7E8 117 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 IGHV3-74A0A0B4J1X5 117 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 IZUMO1RA6ND01 250 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 TAAR5O14804 337 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 BUB3O43684 328 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 HYPMO75409 117 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 CD5P06127 495 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 ORM2P19652 201 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 KRTAP10-11P60412 298 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 ZNF266Q14584 549 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 FAM90A2PQ658T7 463 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 LCN12Q6JVE5 192 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 C16orf54Q6UWD8 224 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 PATE2Q6UY27 113 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 Q6ZRG5 221 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 OR1B1Q8NGR6 318 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 SCGB1C1Q8TD33 95 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 RNF2Q99496 336 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 ARL6Q9H0F7 186 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 SLC39A9Q9NUM3 307 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 PFDN2Q9UHV9 154 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 PXMP4Q9Y6I8 212 aa9.33□□□□□ -0.92
SHROOM3-205ENST00000481002 ELOA3CA0A087WX78 387 aaPredicted RBP9.32□□□□□ -0.92
SHROOM3-205ENST00000481002 A0A0D9SG52 128 aa9.32□□□□□ -0.92
SHROOM3-205ENST00000481002 ZNF785A8K8V0 405 aa9.32□□□□□ -0.92
SHROOM3-205ENST00000481002 CXCL2P19875 107 aa9.32□□□□□ -0.92
SHROOM3-205ENST00000481002 S100A7P31151 101 aa9.32□□□□□ -0.92
SHROOM3-205ENST00000481002 B2MP61769 119 aa9.32□□□□□ -0.92
SHROOM3-205ENST00000481002 CD300CQ08708 224 aa9.32□□□□□ -0.92
SHROOM3-205ENST00000481002 C1orf194Q5T5A4 169 aa9.32□□□□□ -0.92
SHROOM3-205ENST00000481002 LAMTOR1Q6IAA8 161 aa9.32□□□□□ -0.92
SHROOM3-205ENST00000481002 TMEM61Q8N0U2 210 aa9.32□□□□□ -0.92
SHROOM3-205ENST00000481002 ZNF709Q8N972 641 aa9.32□□□□□ -0.92
SHROOM3-205ENST00000481002 GLMPQ8WWB7 406 aa9.32□□□□□ -0.92
SHROOM3-205ENST00000481002 GRAMD2BQ96HH9 432 aa9.32□□□□□ -0.92
SHROOM3-205ENST00000481002 HYLS1Q96M11 299 aa9.32□□□□□ -0.92
SHROOM3-205ENST00000481002 DNAJC4Q9NNZ3 241 aa9.32□□□□□ -0.92
SHROOM3-205ENST00000481002 HIGD1AQ9Y241 93 aa9.32□□□□□ -0.92
SHROOM3-205ENST00000481002 IGHV3-66A0A0C4DH42 116 aa9.31□□□□□ -0.92
SHROOM3-205ENST00000481002 ZNF98A6NK75 572 aa9.31□□□□□ -0.92
SHROOM3-205ENST00000481002 C17orf112F2Z3M2 114 aa9.31□□□□□ -0.92
SHROOM3-205ENST00000481002 H3BRN7 92 aa9.31□□□□□ -0.92
SHROOM3-205ENST00000481002 TSPAN4O14817 238 aa9.31□□□□□ -0.92
SHROOM3-205ENST00000481002 OR5G3P0C626 314 aa9.31□□□□□ -0.92
SHROOM3-205ENST00000481002 TCF24Q7RTU0 167 aa9.31□□□□□ -0.92
SHROOM3-205ENST00000481002 S100A7AQ86SG5 101 aa9.31□□□□□ -0.92
SHROOM3-205ENST00000481002 TMEM37Q8WXS4 190 aa9.31□□□□□ -0.92
SHROOM3-205ENST00000481002 RSG1Q9BU20 258 aa9.31□□□□□ -0.92
SHROOM3-205ENST00000481002 SLC25A39Q9BZJ4 359 aaPredicted RBP9.31□□□□□ -0.92
SHROOM3-205ENST00000481002 ARV1Q9H2C2 271 aa9.31□□□□□ -0.92
SHROOM3-205ENST00000481002 CYTL1Q9NRR1 136 aa9.31□□□□□ -0.92
SHROOM3-205ENST00000481002 KCNIP2Q9NS61 270 aa9.31□□□□□ -0.92
SHROOM3-205ENST00000481002 DOK5Q9P104 306 aa9.31□□□□□ -0.92
SHROOM3-205ENST00000481002 ZNF256Q9Y2P7 627 aaPredicted RBP9.31□□□□□ -0.92
SHROOM3-205ENST00000481002 TIMM9Q9Y5J7 89 aa9.31□□□□□ -0.92
SHROOM3-205ENST00000481002 SELENOKQ9Y6D0 94 aa9.31□□□□□ -0.92
SHROOM3-205ENST00000481002 BORCS7-ASMTA0A0B4J1R7 106 aa9.3□□□□□ -0.92
SHROOM3-205ENST00000481002 JTBO76095 146 aa9.3□□□□□ -0.92
SHROOM3-205ENST00000481002 LGALSLQ3ZCW2 172 aaPredicted RBP9.3□□□□□ -0.92
SHROOM3-205ENST00000481002 RPL7L1Q6DKI1 246 aaKnown RBP9.3□□□□□ -0.92
SHROOM3-205ENST00000481002 RBPMS2Q6ZRY4 209 aaKnown RBP9.3□□□□□ -0.92
SHROOM3-205ENST00000481002 OR1L4Q8NGR5 311 aa9.3□□□□□ -0.92
SHROOM3-205ENST00000481002 GATAD1Q8WUU5 269 aa9.3□□□□□ -0.92
SHROOM3-205ENST00000481002 PPP1R14BQ96C90 147 aa9.3□□□□□ -0.92
SHROOM3-205ENST00000481002 PFDN5Q99471 154 aa9.3□□□□□ -0.92
SHROOM3-205ENST00000481002 SHANK2-AS3Q9BTD1 123 aa9.3□□□□□ -0.92
SHROOM3-205ENST00000481002 HELTA6NFD8 242 aa9.29□□□□□ -0.92
SHROOM3-205ENST00000481002 COX7A2P2O60397 106 aa9.29□□□□□ -0.92
SHROOM3-205ENST00000481002 GP9P14770 177 aa9.29□□□□□ -0.92
SHROOM3-205ENST00000481002 ATP6V0CP27449 155 aa9.29□□□□□ -0.92
SHROOM3-205ENST00000481002 C10orf113Q5VZT2 155 aa9.29□□□□□ -0.92
SHROOM3-205ENST00000481002 TMUB2Q71RG4 321 aa9.29□□□□□ -0.92
SHROOM3-205ENST00000481002 UHRF2Q96PU4 802 aa9.29□□□□□ -0.92
SHROOM3-205ENST00000481002 SPAG8Q99932 426 aaPredicted RBP9.29□□□□□ -0.92
SHROOM3-205ENST00000481002 ARPC5LQ9BPX5 153 aa9.29□□□□□ -0.92
SHROOM3-205ENST00000481002 PSMG3Q9BT73 122 aaPredicted RBP9.29□□□□□ -0.92
SHROOM3-205ENST00000481002 RNF24Q9Y225 148 aa9.29□□□□□ -0.92
SHROOM3-205ENST00000481002 RFNGQ9Y644 331 aa9.29□□□□□ -0.92
SHROOM3-205ENST00000481002 DNAH3Q8TD57 4116 aa9.29□□□□□ -0.92
SHROOM3-205ENST00000481002 GUCA2BQ16661 112 aa9.28□□□□□ -0.92
SHROOM3-205ENST00000481002 ZFP69Q49AA0 526 aa9.28□□□□□ -0.92
SHROOM3-205ENST00000481002 FFAR4Q5NUL3 377 aa9.28□□□□□ -0.92
SHROOM3-205ENST00000481002 LINC00305Q7Z4B0 112 aa9.28□□□□□ -0.92
SHROOM3-205ENST00000481002 OR8I2Q8N0Y5 310 aa9.28□□□□□ -0.92
SHROOM3-205ENST00000481002 HSD17B11Q8NBQ5 300 aa9.28□□□□□ -0.92
SHROOM3-205ENST00000481002 OR2G3Q8NGZ4 309 aa9.28□□□□□ -0.92
SHROOM3-205ENST00000481002 GPR82Q96P67 336 aa9.28□□□□□ -0.92
SHROOM3-205ENST00000481002 SCRT1Q9BWW7 348 aa9.28□□□□□ -0.92
SHROOM3-205ENST00000481002 MEGF8Q7Z7M0 2845 aa9.27□□□□□ -0.93
SHROOM3-205ENST00000481002 TRAV2A0A0B4J234 112 aa9.27□□□□□ -0.93
SHROOM3-205ENST00000481002 KANTRA0A1W2PQU2 76 aa9.27□□□□□ -0.93
SHROOM3-205ENST00000481002 BCL2L11O43521 198 aa9.27□□□□□ -0.93
SHROOM3-205ENST00000481002 PAFAH1B2P68402 229 aa9.27□□□□□ -0.93
SHROOM3-205ENST00000481002 SERF2P84101 59 aa9.27□□□□□ -0.93
SHROOM3-205ENST00000481002 GCSAMLQ5JQS6 135 aa9.27□□□□□ -0.93
SHROOM3-205ENST00000481002 MORN5Q5VZ52 161 aa9.27□□□□□ -0.93
SHROOM3-205ENST00000481002 LEMD1Q68G75 181 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms