RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 PRR20CP86479 221 aa8.5□□□□□ -1.05
CLDN11-205ENST00000480067 PRR20DP86480 221 aa8.5□□□□□ -1.05
CLDN11-205ENST00000480067 PRR20BP86481 221 aa8.5□□□□□ -1.05
CLDN11-205ENST00000480067 PRR20AP86496 221 aa8.5□□□□□ -1.05
CLDN11-205ENST00000480067 OPCMLQ14982 345 aa8.5□□□□□ -1.05
CLDN11-205ENST00000480067 PXDC1Q5TGL8 231 aa8.5□□□□□ -1.05
CLDN11-205ENST00000480067 HSD17B11Q8NBQ5 300 aa8.5□□□□□ -1.05
CLDN11-205ENST00000480067 DYNLRB2Q8TF09 96 aa8.5□□□□□ -1.05
CLDN11-205ENST00000480067 RSG1Q9BU20 258 aa8.5□□□□□ -1.05
CLDN11-205ENST00000480067 RHPN1-AS1Q9BWJ2 59 aa8.5□□□□□ -1.05
CLDN11-205ENST00000480067 GPR61Q9BZJ8 451 aa8.5□□□□□ -1.05
CLDN11-205ENST00000480067 SLC39A9Q9NUM3 307 aa8.5□□□□□ -1.05
CLDN11-205ENST00000480067 SMPXQ9UHP9 88 aa8.5□□□□□ -1.05
CLDN11-205ENST00000480067 IGHV3OR16-13A0A075B7E8 117 aa8.49□□□□□ -1.05
CLDN11-205ENST00000480067 ELOA3CA0A087WX78 387 aaPredicted RBP8.49□□□□□ -1.05
CLDN11-205ENST00000480067 IGHV3-74A0A0B4J1X5 117 aa8.49□□□□□ -1.05
CLDN11-205ENST00000480067 IGHV3-66A0A0C4DH42 116 aa8.49□□□□□ -1.05
CLDN11-205ENST00000480067 BCL2L11O43521 198 aa8.49□□□□□ -1.05
CLDN11-205ENST00000480067 COX7A2P2O60397 106 aa8.49□□□□□ -1.05
CLDN11-205ENST00000480067 APOHP02749 345 aaPredicted RBP8.49□□□□□ -1.05
CLDN11-205ENST00000480067 HNRNPCP07910 306 aaKnown RBP eCLIP8.49□□□□□ -1.05
CLDN11-205ENST00000480067 C8orf88P0DMB2 117 aa8.49□□□□□ -1.05
CLDN11-205ENST00000480067 EDN2P20800 178 aa8.49□□□□□ -1.05
CLDN11-205ENST00000480067 PLP1P60201 277 aa8.49□□□□□ -1.05
CLDN11-205ENST00000480067 ADAMTSL5Q6ZMM2 481 aa8.49□□□□□ -1.05
CLDN11-205ENST00000480067 GNPNAT1Q96EK6 184 aaPredicted RBP8.49□□□□□ -1.05
CLDN11-205ENST00000480067 GRAMD2BQ96HH9 432 aa8.49□□□□□ -1.05
CLDN11-205ENST00000480067 TMEM231Q9H6L2 316 aa8.49□□□□□ -1.05
CLDN11-205ENST00000480067 DNAJC4Q9NNZ3 241 aa8.49□□□□□ -1.05
CLDN11-205ENST00000480067 CYTL1Q9NRR1 136 aa8.49□□□□□ -1.05
CLDN11-205ENST00000480067 TECRQ9NZ01 308 aaKnown RBP8.49□□□□□ -1.05
CLDN11-205ENST00000480067 HIGD1AQ9Y241 93 aa8.49□□□□□ -1.05
CLDN11-205ENST00000480067 CHEK1O14757 476 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 C4BPBP20851 252 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 OXLD1Q5BKU9 147 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 OR1L4Q8NGR5 311 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 PFDN5Q99471 154 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 ZNF471Q9BX82 626 aaPredicted RBP8.48□□□□□ -1.05
CLDN11-205ENST00000480067 ARV1Q9H2C2 271 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 TIMM9Q9Y5J7 89 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 BUB3O43684 328 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 ATP6V0CP27449 155 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 NKX2-5P52952 324 aaPredicted RBP8.48□□□□□ -1.05
CLDN11-205ENST00000480067 RPL11P62913 178 aaKnown RBP8.48□□□□□ -1.05
CLDN11-205ENST00000480067 EIF5AP63241 154 aaKnown RBP8.48□□□□□ -1.05
CLDN11-205ENST00000480067 DEFB114Q30KQ6 69 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 FFAR4Q5NUL3 377 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 C10orf113Q5VZT2 155 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 LAMTOR1Q6IAA8 161 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 C9orf62Q8N4C0 152 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 TMEM37Q8WXS4 190 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 ST8SIA2Q92186 375 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 UHRF2Q96PU4 802 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 VSIRQ9H7M9 311 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 MLXQ9UH92 298 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 SELENOKQ9Y6D0 94 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 U3KQE9 123 aa8.48□□□□□ -1.05
CLDN11-205ENST00000480067 IGLV1-51P01701 117 aa8.47□□□□□ -1.05
CLDN11-205ENST00000480067 CD5P06127 495 aa8.47□□□□□ -1.05
CLDN11-205ENST00000480067 SERF2P84101 59 aa8.47□□□□□ -1.05
CLDN11-205ENST00000480067 CD300EQ496F6 205 aaPredicted RBP8.47□□□□□ -1.05
CLDN11-205ENST00000480067 PATE2Q6UY27 113 aa8.47□□□□□ -1.05
CLDN11-205ENST00000480067 RBPMS2Q6ZRY4 209 aaKnown RBP8.47□□□□□ -1.05
CLDN11-205ENST00000480067 LINC00305Q7Z4B0 112 aa8.47□□□□□ -1.05
CLDN11-205ENST00000480067 OR8I2Q8N0Y5 310 aa8.47□□□□□ -1.05
CLDN11-205ENST00000480067 GATAD1Q8WUU5 269 aa8.47□□□□□ -1.05
CLDN11-205ENST00000480067 RNF2Q99496 336 aa8.47□□□□□ -1.05
CLDN11-205ENST00000480067 PSMG3Q9BT73 122 aaPredicted RBP8.47□□□□□ -1.05
CLDN11-205ENST00000480067 SLC25A39Q9BZJ4 359 aaPredicted RBP8.47□□□□□ -1.05
CLDN11-205ENST00000480067 SH3BGRL3Q9H299 93 aa8.47□□□□□ -1.05
CLDN11-205ENST00000480067 SLC25A32Q9H2D1 315 aa8.47□□□□□ -1.05
CLDN11-205ENST00000480067 SLC25A22Q9H936 323 aa8.47□□□□□ -1.05
CLDN11-205ENST00000480067 RNF24Q9Y225 148 aa8.47□□□□□ -1.05
CLDN11-205ENST00000480067 RFNGQ9Y644 331 aa8.47□□□□□ -1.05
CLDN11-205ENST00000480067 NBEAL1Q6ZS30 2694 aa8.47□□□□□ -1.05
CLDN11-205ENST00000480067 CMYA5Q8N3K9 4069 aa8.46□□□□□ -1.05
CLDN11-205ENST00000480067 ZNF98A6NK75 572 aa8.46□□□□□ -1.06
CLDN11-205ENST00000480067 GCSAMLQ5JQS6 135 aa8.46□□□□□ -1.06
CLDN11-205ENST00000480067 C1orf194Q5T5A4 169 aa8.46□□□□□ -1.06
CLDN11-205ENST00000480067 LCN12Q6JVE5 192 aa8.46□□□□□ -1.06
CLDN11-205ENST00000480067 OR2G3Q8NGZ4 309 aa8.46□□□□□ -1.06
CLDN11-205ENST00000480067 SHANK2-AS3Q9BTD1 123 aa8.46□□□□□ -1.06
CLDN11-205ENST00000480067 HELTA6NFD8 242 aa8.45□□□□□ -1.06
CLDN11-205ENST00000480067 G3V4G9 280 aa8.45□□□□□ -1.06
CLDN11-205ENST00000480067 WIPF1O43516 503 aa8.45□□□□□ -1.06
CLDN11-205ENST00000480067 MBP02144 154 aa8.45□□□□□ -1.06
CLDN11-205ENST00000480067 TPT1P13693 172 aaKnown RBP8.45□□□□□ -1.06
CLDN11-205ENST00000480067 ACOT6Q3I5F7 207 aaPredicted RBP8.45□□□□□ -1.06
CLDN11-205ENST00000480067 FAM78BQ5VT40 261 aa8.45□□□□□ -1.06
CLDN11-205ENST00000480067 LEMD1Q68G75 181 aa8.45□□□□□ -1.06
CLDN11-205ENST00000480067 C16orf54Q6UWD8 224 aa8.45□□□□□ -1.06
CLDN11-205ENST00000480067 TCF24Q7RTU0 167 aa8.45□□□□□ -1.06
CLDN11-205ENST00000480067 BAP18Q8IXM2 172 aa8.45□□□□□ -1.06
CLDN11-205ENST00000480067 OR2K2Q8NGT1 345 aa8.45□□□□□ -1.06
CLDN11-205ENST00000480067 SCRT1Q9BWW7 348 aa8.45□□□□□ -1.06
CLDN11-205ENST00000480067 ZMAT5Q9UDW3 170 aaKnown RBP8.45□□□□□ -1.06
CLDN11-205ENST00000480067 NOTCH1P46531 2555 aa8.45□□□□□ -1.06
CLDN11-205ENST00000480067 IGKV3-7A0A075B6H7 116 aa8.44□□□□□ -1.06
CLDN11-205ENST00000480067 TRAV25A0A0B4J276 109 aa8.44□□□□□ -1.06
CLDN11-205ENST00000480067 H3BRN7 92 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms