RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	FXYD6-FXYD2	A0A087WZ82	144 aa		11.61	□□□□□ -0.55
HDLBP-238	ENST00000479894	TRAV14DV4	A0A0A6YYC5	116 aa		11.61	□□□□□ -0.55
HDLBP-238	ENST00000479894		A8MWP6	167 aa		11.61	□□□□□ -0.55
HDLBP-238	ENST00000479894	TOMM40	O96008	361 aa		11.61	□□□□□ -0.55
HDLBP-238	ENST00000479894	IGKV1-17	P01599	117 aa		11.61	□□□□□ -0.55
HDLBP-238	ENST00000479894	CD5	P06127	495 aa		11.61	□□□□□ -0.55
HDLBP-238	ENST00000479894	ADM	P35318	185 aa		11.61	□□□□□ -0.55
HDLBP-238	ENST00000479894	VWC2	Q2TAL6	325 aa		11.61	□□□□□ -0.55
HDLBP-238	ENST00000479894	PXDC1	Q5TGL8	231 aa		11.61	□□□□□ -0.55
HDLBP-238	ENST00000479894	TCTE3	Q8IZS6	198 aa		11.61	□□□□□ -0.55
HDLBP-238	ENST00000479894	BPIFC	Q8NFQ6	507 aa		11.61	□□□□□ -0.55
HDLBP-238	ENST00000479894	OR51G1	Q8NGK1	321 aa		11.61	□□□□□ -0.55
HDLBP-238	ENST00000479894	OR5C1	Q8NGR4	320 aa		11.61	□□□□□ -0.55
HDLBP-238	ENST00000479894	TMEM190	Q8WZ59	177 aa		11.61	□□□□□ -0.55
HDLBP-238	ENST00000479894		A0A1W2PS18	150 aa		11.6	□□□□□ -0.55
HDLBP-238	ENST00000479894	HMSD	A8MTL9	139 aa		11.6	□□□□□ -0.55
HDLBP-238	ENST00000479894	OR11H12	B2RN74	326 aa		11.6	□□□□□ -0.55
HDLBP-238	ENST00000479894	TAAR5	O14804	337 aa		11.6	□□□□□ -0.55
HDLBP-238	ENST00000479894	CD7	P09564	240 aa		11.6	□□□□□ -0.55
HDLBP-238	ENST00000479894	NHLH2	Q02577	135 aa		11.6	□□□□□ -0.55
HDLBP-238	ENST00000479894	ZNF266	Q14584	549 aa		11.6	□□□□□ -0.55
HDLBP-238	ENST00000479894	TIGIT	Q495A1	244 aa		11.6	□□□□□ -0.55
HDLBP-238	ENST00000479894	ZNF709	Q8N972	641 aa		11.6	□□□□□ -0.55
HDLBP-238	ENST00000479894	SCGB1C1	Q8TD33	95 aa		11.6	□□□□□ -0.55
HDLBP-238	ENST00000479894	METTL26	Q96S19	204 aa		11.6	□□□□□ -0.55
HDLBP-238	ENST00000479894	C20orf24	Q9BUV8	137 aa		11.6	□□□□□ -0.55
HDLBP-238	ENST00000479894	TMEM231	Q9H6L2	316 aa		11.6	□□□□□ -0.55
HDLBP-238	ENST00000479894	TECR	Q9NZ01	308 aa	Known RBP	11.6	□□□□□ -0.55
HDLBP-238	ENST00000479894	MRPL27	Q9P0M9	148 aa	Known RBP	11.6	□□□□□ -0.55
HDLBP-238	ENST00000479894	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
HDLBP-238	ENST00000479894		A0A0J9YWU9	116 aa		11.59	□□□□□ -0.55
HDLBP-238	ENST00000479894	C17orf112	F2Z3M2	114 aa		11.59	□□□□□ -0.55
HDLBP-238	ENST00000479894	LINC00336	Q6ZUF6	198 aa		11.59	□□□□□ -0.55
HDLBP-238	ENST00000479894	GRAMD2B	Q96HH9	432 aa		11.59	□□□□□ -0.55
HDLBP-238	ENST00000479894	ATP5S	Q99766	215 aa		11.59	□□□□□ -0.55
HDLBP-238	ENST00000479894	MRPL36	Q9P0J6	103 aa	Known RBP	11.59	□□□□□ -0.55
HDLBP-238	ENST00000479894	TNFSF18	Q9UNG2	199 aa		11.59	□□□□□ -0.55
HDLBP-238	ENST00000479894	WDR83OS	Q9Y284	106 aa		11.59	□□□□□ -0.55
HDLBP-238	ENST00000479894	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.58	□□□□□ -0.56
HDLBP-238	ENST00000479894	ZNF785	A8K8V0	405 aa		11.58	□□□□□ -0.56
HDLBP-238	ENST00000479894	NPPC	P23582	126 aa		11.58	□□□□□ -0.56
HDLBP-238	ENST00000479894	ARL16	Q0P5N6	197 aa		11.58	□□□□□ -0.56
HDLBP-238	ENST00000479894	OR2F1	Q13607	317 aa		11.58	□□□□□ -0.56
HDLBP-238	ENST00000479894	BTNL8	Q6UX41	500 aa		11.58	□□□□□ -0.56
HDLBP-238	ENST00000479894	TOMM20L	Q6UXN7	152 aa		11.58	□□□□□ -0.56
HDLBP-238	ENST00000479894		Q6ZRG5	221 aa		11.58	□□□□□ -0.56
HDLBP-238	ENST00000479894	CYP2G1P	Q6ZSU1	146 aa		11.58	□□□□□ -0.56
HDLBP-238	ENST00000479894	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.58	□□□□□ -0.56
HDLBP-238	ENST00000479894	MFF	Q9GZY8	342 aa		11.58	□□□□□ -0.56
HDLBP-238	ENST00000479894	WFDC10A	Q9H1F0	79 aa		11.58	□□□□□ -0.56
HDLBP-238	ENST00000479894	SLC45A2	Q9UMX9	530 aa		11.58	□□□□□ -0.56
HDLBP-238	ENST00000479894	IGHV3-35	A0A0C4DH35	117 aa		11.57	□□□□□ -0.56
HDLBP-238	ENST00000479894		A0A0D9SG52	128 aa		11.57	□□□□□ -0.56
HDLBP-238	ENST00000479894	PSG1	P11464	419 aa		11.57	□□□□□ -0.56
HDLBP-238	ENST00000479894	C4BPB	P20851	252 aa		11.57	□□□□□ -0.56
HDLBP-238	ENST00000479894	CAMLG	P49069	296 aa		11.57	□□□□□ -0.56
HDLBP-238	ENST00000479894	EIF2B2	P49770	351 aa	Known RBP	11.57	□□□□□ -0.56
HDLBP-238	ENST00000479894	ZNF345	Q14585	488 aa		11.57	□□□□□ -0.56
HDLBP-238	ENST00000479894	CLINT1	Q14677	625 aa		11.57	□□□□□ -0.56
HDLBP-238	ENST00000479894	CD300E	Q496F6	205 aa	Predicted RBP	11.57	□□□□□ -0.56
HDLBP-238	ENST00000479894	ST6GAL2	Q96JF0	529 aa		11.57	□□□□□ -0.56
HDLBP-238	ENST00000479894	HYLS1	Q96M11	299 aa		11.57	□□□□□ -0.56
HDLBP-238	ENST00000479894	GGTLC1	Q9BX51	225 aa		11.57	□□□□□ -0.56
HDLBP-238	ENST00000479894	RABAC1	Q9UI14	185 aa		11.57	□□□□□ -0.56
HDLBP-238	ENST00000479894	TP53TG1	Q9Y2A0	90 aa		11.57	□□□□□ -0.56
HDLBP-238	ENST00000479894	UBE2L5P	A0A1B0GUS4	154 aa		11.56	□□□□□ -0.56
HDLBP-238	ENST00000479894		A0A1B0GVY2	172 aa		11.56	□□□□□ -0.56
HDLBP-238	ENST00000479894	C2orf70	A6NJV1	201 aa		11.56	□□□□□ -0.56
HDLBP-238	ENST00000479894	ARPC5	O15511	151 aa		11.56	□□□□□ -0.56
HDLBP-238	ENST00000479894	IL4	P05112	153 aa		11.56	□□□□□ -0.56
HDLBP-238	ENST00000479894	FGF7	P21781	194 aa		11.56	□□□□□ -0.56
HDLBP-238	ENST00000479894	CBLN1	P23435	193 aa		11.56	□□□□□ -0.56
HDLBP-238	ENST00000479894		Q5BKY6	102 aa		11.56	□□□□□ -0.56
HDLBP-238	ENST00000479894	LAMTOR1	Q6IAA8	161 aa		11.56	□□□□□ -0.56
HDLBP-238	ENST00000479894	DYNLRB2	Q8TF09	96 aa		11.56	□□□□□ -0.56
HDLBP-238	ENST00000479894	RNF125	Q96EQ8	232 aa		11.56	□□□□□ -0.56
HDLBP-238	ENST00000479894	IGKV1D-37	A0A075B6S9	117 aa		11.55	□□□□□ -0.56
HDLBP-238	ENST00000479894	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.55	□□□□□ -0.56
HDLBP-238	ENST00000479894	AGPAT2	O15120	278 aa		11.55	□□□□□ -0.56
HDLBP-238	ENST00000479894	C1QB	P02746	253 aa		11.55	□□□□□ -0.56
HDLBP-238	ENST00000479894	C8orf88	P0DMB2	117 aa		11.55	□□□□□ -0.56
HDLBP-238	ENST00000479894	FOLR2	P14207	255 aa		11.55	□□□□□ -0.56
HDLBP-238	ENST00000479894	RPL29	P47914	159 aa	Known RBP	11.55	□□□□□ -0.56
HDLBP-238	ENST00000479894	EIF5A	P63241	154 aa	Known RBP	11.55	□□□□□ -0.56
HDLBP-238	ENST00000479894	ZNF90	Q03938	601 aa		11.55	□□□□□ -0.56
HDLBP-238	ENST00000479894	UNQ9165/PRO28630	Q6UXU0	137 aa		11.55	□□□□□ -0.56
HDLBP-238	ENST00000479894	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.55	□□□□□ -0.56
HDLBP-238	ENST00000479894	IGKV1OR2-108	A0A075B7D4	117 aa		11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	TRAV25	A0A0B4J276	109 aa		11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	IGHV7-4-1	A0A0J9YVY3	117 aa		11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	HYPM	O75409	117 aa		11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	PLP1	P60201	277 aa		11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	LYZ	P61626	148 aa		11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	PRR20E	P86478	221 aa		11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	PRR20C	P86479	221 aa		11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	PRR20D	P86480	221 aa		11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	PRR20B	P86481	221 aa		11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	PRR20A	P86496	221 aa		11.54	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms