RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 IGSF23A1L1A6 192 aa15.27■□□□□ 0.04
VARS-224ENST00000479051 ORM2P19652 201 aa15.27■□□□□ 0.04
VARS-224ENST00000479051 ATP6V1FQ16864 119 aa15.27■□□□□ 0.04
VARS-224ENST00000479051 ODF3L2Q3SX64 289 aa15.27■□□□□ 0.04
VARS-224ENST00000479051 C1orf194Q5T5A4 169 aa15.27■□□□□ 0.04
VARS-224ENST00000479051 SIGLEC15Q6ZMC9 328 aa15.27■□□□□ 0.04
VARS-224ENST00000479051 LINC00869P0C866 280 aa15.26■□□□□ 0.03
VARS-224ENST00000479051 GATA2P23769 480 aaPredicted RBP15.26■□□□□ 0.03
VARS-224ENST00000479051 OR1B1Q8NGR6 318 aa15.26■□□□□ 0.03
VARS-224ENST00000479051 OR5AC2Q9NZP5 309 aa15.26■□□□□ 0.03
VARS-224ENST00000479051 HYPMO75409 117 aa15.25■□□□□ 0.03
VARS-224ENST00000479051 RAP2BP61225 183 aa15.25■□□□□ 0.03
VARS-224ENST00000479051 BAXQ07812 192 aa15.25■□□□□ 0.03
VARS-224ENST00000479051 HAGHQ16775 308 aa15.25■□□□□ 0.03
VARS-224ENST00000479051 LOC102724200A0A096LPH7 203 aaPredicted RBP15.24■□□□□ 0.03
VARS-224ENST00000479051 RBMY1BA6NDE4 496 aaKnown RBP15.24■□□□□ 0.03
VARS-224ENST00000479051 RBMY1EA6NEQ0 496 aaKnown RBP15.24■□□□□ 0.03
VARS-224ENST00000479051 K7EQG2 157 aa15.24■□□□□ 0.03
VARS-224ENST00000479051 AGPAT2O15120 278 aa15.24■□□□□ 0.03
VARS-224ENST00000479051 MPC2O95563 127 aa15.24■□□□□ 0.03
VARS-224ENST00000479051 RBMY1DP0C7P1 496 aaKnown RBP15.24■□□□□ 0.03
VARS-224ENST00000479051 EWSR1Q01844 656 aaKnown RBP eCLIP15.24■□□□□ 0.03
VARS-224ENST00000479051 PXDC1Q5TGL8 231 aa15.24■□□□□ 0.03
VARS-224ENST00000479051 LINC00322Q6ZN03 302 aaPredicted RBP15.24■□□□□ 0.03
VARS-224ENST00000479051 TMEM182Q6ZP80 229 aaPredicted RBP15.24■□□□□ 0.03
VARS-224ENST00000479051 OR8I2Q8N0Y5 310 aa15.24■□□□□ 0.03
VARS-224ENST00000479051 GGTLC1Q9BX51 225 aa15.24■□□□□ 0.03
VARS-224ENST00000479051 MAP6D1Q9H9H5 199 aa15.24■□□□□ 0.03
VARS-224ENST00000479051 NRN1Q9NPD7 142 aa15.24■□□□□ 0.03
VARS-224ENST00000479051 HIGD1AQ9Y241 93 aa15.24■□□□□ 0.03
VARS-224ENST00000479051 U3KQK5 164 aa15.24■□□□□ 0.03
VARS-224ENST00000479051 UBE2L5PA0A1B0GUS4 154 aa15.23■□□□□ 0.03
VARS-224ENST00000479051 H0YIZ8 118 aa15.23■□□□□ 0.03
VARS-224ENST00000479051 OR5G3P0C626 314 aa15.23■□□□□ 0.03
VARS-224ENST00000479051 CAMLGP49069 296 aa15.23■□□□□ 0.03
VARS-224ENST00000479051 PLP1P60201 277 aa15.23■□□□□ 0.03
VARS-224ENST00000479051 OXA1LQ15070 435 aa15.23■□□□□ 0.03
VARS-224ENST00000479051 VWC2Q2TAL6 325 aa15.23■□□□□ 0.03
VARS-224ENST00000479051 SPATA25Q9BR10 227 aa15.23■□□□□ 0.03
VARS-224ENST00000479051 DOK5Q9P104 306 aa15.23■□□□□ 0.03
VARS-224ENST00000479051 RNF24Q9Y225 148 aa15.23■□□□□ 0.03
VARS-224ENST00000479051 WDR83OSQ9Y284 106 aa15.23■□□□□ 0.03
VARS-224ENST00000479051 FCN2Q15485 313 aa15.22■□□□□ 0.03
VARS-224ENST00000479051 APRG1Q8IVJ8 170 aa15.22■□□□□ 0.03
VARS-224ENST00000479051 DCANP1Q8TF63 244 aa15.22■□□□□ 0.03
VARS-224ENST00000479051 GPR82Q96P67 336 aa15.22■□□□□ 0.03
VARS-224ENST00000479051 TM2D3Q9BRN9 247 aa15.22■□□□□ 0.03
VARS-224ENST00000479051 ARL6Q9H0F7 186 aa15.22■□□□□ 0.03
VARS-224ENST00000479051 ZNF98A6NK75 572 aa15.21■□□□□ 0.03
VARS-224ENST00000479051 CXCL3P19876 107 aa15.21■□□□□ 0.03
VARS-224ENST00000479051 GALR1P47211 349 aa15.21■□□□□ 0.03
VARS-224ENST00000479051 APOC4P55056 127 aa15.21■□□□□ 0.03
VARS-224ENST00000479051 DEFB131AP59861 70 aa15.21■□□□□ 0.03
VARS-224ENST00000479051 SNRPD3P62318 126 aaKnown RBP15.21■□□□□ 0.03
VARS-224ENST00000479051 STPG3Q8N7X2 389 aa15.21■□□□□ 0.03
VARS-224ENST00000479051 OR5C1Q8NGR4 320 aa15.21■□□□□ 0.03
VARS-224ENST00000479051 THAP6Q8TBB0 222 aa15.21■□□□□ 0.03
VARS-224ENST00000479051 ASB13Q8WXK3 278 aa15.21■□□□□ 0.03
VARS-224ENST00000479051 CITED4Q96RK1 184 aa15.21■□□□□ 0.03
VARS-224ENST00000479051 MGST2Q99735 147 aa15.21■□□□□ 0.03
VARS-224ENST00000479051 SLC25A22Q9H936 323 aa15.21■□□□□ 0.03
VARS-224ENST00000479051 SEPSECSQ9HD40 501 aaKnown RBP15.21■□□□□ 0.03
VARS-224ENST00000479051 MPDU1O75352 247 aa15.2■□□□□ 0.02
VARS-224ENST00000479051 FGF7P21781 194 aa15.2■□□□□ 0.02
VARS-224ENST00000479051 NHLH2Q02577 135 aa15.2■□□□□ 0.02
VARS-224ENST00000479051 SAMD13Q5VXD3 122 aa15.2■□□□□ 0.02
VARS-224ENST00000479051 Q6ZRG5 221 aa15.2■□□□□ 0.02
VARS-224ENST00000479051 RCHY1Q96PM5 261 aa15.2■□□□□ 0.02
VARS-224ENST00000479051 RNF126Q9BV68 326 aa15.2■□□□□ 0.02
VARS-224ENST00000479051 SLC25A39Q9BZJ4 359 aaPredicted RBP15.2■□□□□ 0.02
VARS-224ENST00000479051 MBD2Q9UBB5 411 aa15.2■□□□□ 0.02
VARS-224ENST00000479051 H3BRN7 92 aa15.19■□□□□ 0.02
VARS-224ENST00000479051 COX7A2P2O60397 106 aa15.19■□□□□ 0.02
VARS-224ENST00000479051 ZNF688P0C7X2 276 aa15.19■□□□□ 0.02
VARS-224ENST00000479051 FAM24BQ8N5W8 94 aa15.19■□□□□ 0.02
VARS-224ENST00000479051 OR11H7Q8NGC8 314 aa15.19■□□□□ 0.02
VARS-224ENST00000479051 SHANK2-AS3Q9BTD1 123 aa15.19■□□□□ 0.02
VARS-224ENST00000479051 ELOA3CA0A087WX78 387 aaPredicted RBP15.18■□□□□ 0.02
VARS-224ENST00000479051 ID1P41134 155 aa15.18■□□□□ 0.02
VARS-224ENST00000479051 MEOX2P50222 304 aa15.18■□□□□ 0.02
VARS-224ENST00000479051 FGL1Q08830 312 aa15.18■□□□□ 0.02
VARS-224ENST00000479051 CLINT1Q14677 625 aa15.18■□□□□ 0.02
VARS-224ENST00000479051 ARV1Q9H2C2 271 aa15.18■□□□□ 0.02
VARS-224ENST00000479051 SLC25A32Q9H2D1 315 aa15.18■□□□□ 0.02
VARS-224ENST00000479051 COL7A1Q02388 2944 aa15.18■□□□□ 0.02
VARS-224ENST00000479051 DNAH9Q9NYC9 4486 aa15.17■□□□□ 0.02
VARS-224ENST00000479051 KIR2DL5BA0A0G2JN68 375 aa15.17■□□□□ 0.02
VARS-224ENST00000479051 KIR2DL5BA0A0G2JPC4 375 aa15.17■□□□□ 0.02
VARS-224ENST00000479051 GIPP09681 153 aaPredicted RBP15.17■□□□□ 0.02
VARS-224ENST00000479051 RPL35AP18077 110 aaKnown RBP15.17■□□□□ 0.02
VARS-224ENST00000479051 RPL7P18124 248 aaKnown RBP15.17■□□□□ 0.02
VARS-224ENST00000479051 RPL12P30050 165 aaKnown RBP15.17■□□□□ 0.02
VARS-224ENST00000479051 LEMD1Q68G75 181 aa15.17■□□□□ 0.02
VARS-224ENST00000479051 STHQ8IWL8 128 aa15.17■□□□□ 0.02
VARS-224ENST00000479051 KIR2DL5AQ8N109 375 aa15.17■□□□□ 0.02
VARS-224ENST00000479051 OR1L4Q8NGR5 311 aa15.17■□□□□ 0.02
VARS-224ENST00000479051 KIR2DL5BQ8NHK3 375 aa15.17■□□□□ 0.02
VARS-224ENST00000479051 CHAC2Q8WUX2 184 aa15.17■□□□□ 0.02
VARS-224ENST00000479051 SCRT1Q9BWW7 348 aa15.17■□□□□ 0.02
VARS-224ENST00000479051 HSPB11Q9Y547 144 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms