RNA–Protein interactions for RNA: ENST00000478901.1

CDK11A-215, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 931 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-215ENST00000478901 ORM2P19652 201 aa12.87□□□□□ -0.35
CDK11A-215ENST00000478901 PLP1P60201 277 aa12.87□□□□□ -0.35
CDK11A-215ENST00000478901 RPL11P62913 178 aaKnown RBP12.87□□□□□ -0.35
CDK11A-215ENST00000478901 BAXQ07812 192 aa12.87□□□□□ -0.35
CDK11A-215ENST00000478901 UBE2L5PA0A1B0GUS4 154 aa12.86□□□□□ -0.35
CDK11A-215ENST00000478901 RPL12P30050 165 aaKnown RBP12.86□□□□□ -0.35
CDK11A-215ENST00000478901 NUP62P37198 522 aaPredicted RBP12.86□□□□□ -0.35
CDK11A-215ENST00000478901 PAFAH1B2P68402 229 aa12.86□□□□□ -0.35
CDK11A-215ENST00000478901 ODF3L2Q3SX64 289 aa12.86□□□□□ -0.35
CDK11A-215ENST00000478901 Q5BKY6 102 aa12.86□□□□□ -0.35
CDK11A-215ENST00000478901 WFDC3Q8IUB2 231 aa12.86□□□□□ -0.35
CDK11A-215ENST00000478901 OR1B1Q8NGR6 318 aa12.86□□□□□ -0.35
CDK11A-215ENST00000478901 THAP6Q8TBB0 222 aa12.86□□□□□ -0.35
CDK11A-215ENST00000478901 DOK5Q9P104 306 aa12.86□□□□□ -0.35
CDK11A-215ENST00000478901 UBQLN2Q9UHD9 624 aa12.86□□□□□ -0.35
CDK11A-215ENST00000478901 PFDN2Q9UHV9 154 aa12.86□□□□□ -0.35
CDK11A-215ENST00000478901 COL7A1Q02388 2944 aa12.85□□□□□ -0.35
CDK11A-215ENST00000478901 HELTA6NFD8 242 aa12.85□□□□□ -0.35
CDK11A-215ENST00000478901 DNASE2O00115 360 aaPredicted RBP12.85□□□□□ -0.35
CDK11A-215ENST00000478901 CAMLGP49069 296 aa12.85□□□□□ -0.35
CDK11A-215ENST00000478901 RAP2BP61225 183 aa12.85□□□□□ -0.35
CDK11A-215ENST00000478901 CLINT1Q14677 625 aa12.85□□□□□ -0.35
CDK11A-215ENST00000478901 ZNF546Q86UE3 836 aa12.85□□□□□ -0.35
CDK11A-215ENST00000478901 STXBP6Q8NFX7 210 aa12.85□□□□□ -0.35
CDK11A-215ENST00000478901 ASB13Q8WXK3 278 aa12.85□□□□□ -0.35
CDK11A-215ENST00000478901 PPP1R14BQ96C90 147 aa12.85□□□□□ -0.35
CDK11A-215ENST00000478901 GGTLC1Q9BX51 225 aa12.85□□□□□ -0.35
CDK11A-215ENST00000478901 HSPB11Q9Y547 144 aa12.85□□□□□ -0.35
CDK11A-215ENST00000478901 HUWE1Q7Z6Z7 4374 aaKnown RBP12.84□□□□□ -0.35
CDK11A-215ENST00000478901 TRAV2A0A0B4J234 112 aa12.84□□□□□ -0.35
CDK11A-215ENST00000478901 K7EQG2 157 aa12.84□□□□□ -0.35
CDK11A-215ENST00000478901 HYPMO75409 117 aa12.84□□□□□ -0.35
CDK11A-215ENST00000478901 FGF7P21781 194 aa12.84□□□□□ -0.35
CDK11A-215ENST00000478901 AP2S1P53680 142 aaPredicted RBP12.84□□□□□ -0.35
CDK11A-215ENST00000478901 RAB31Q13636 194 aa12.84□□□□□ -0.35
CDK11A-215ENST00000478901 C1orf194Q5T5A4 169 aa12.84□□□□□ -0.35
CDK11A-215ENST00000478901 PATE2Q6UY27 113 aa12.84□□□□□ -0.35
CDK11A-215ENST00000478901 SIGLEC15Q6ZMC9 328 aa12.84□□□□□ -0.35
CDK11A-215ENST00000478901 FAM24BQ8N5W8 94 aa12.84□□□□□ -0.35
CDK11A-215ENST00000478901 CHAC2Q8WUX2 184 aa12.84□□□□□ -0.35
CDK11A-215ENST00000478901 CITED4Q96RK1 184 aa12.84□□□□□ -0.35
CDK11A-215ENST00000478901 ASCL2Q99929 193 aa12.84□□□□□ -0.35
CDK11A-215ENST00000478901 ARL6Q9H0F7 186 aa12.84□□□□□ -0.35
CDK11A-215ENST00000478901 TUBA4BQ9H853 241 aa12.84□□□□□ -0.35
CDK11A-215ENST00000478901 SRD5A3Q9H8P0 318 aa12.84□□□□□ -0.35
CDK11A-215ENST00000478901 ZNF98A6NK75 572 aa12.83□□□□□ -0.36
CDK11A-215ENST00000478901 OR5G3P0C626 314 aa12.83□□□□□ -0.36
CDK11A-215ENST00000478901 FGL1Q08830 312 aa12.83□□□□□ -0.36
CDK11A-215ENST00000478901 OPCMLQ14982 345 aa12.83□□□□□ -0.36
CDK11A-215ENST00000478901 MIC13Q5XKP0 118 aa12.83□□□□□ -0.36
CDK11A-215ENST00000478901 SBSPONQ8IVN8 264 aa12.83□□□□□ -0.36
CDK11A-215ENST00000478901 DCANP1Q8TF63 244 aa12.83□□□□□ -0.36
CDK11A-215ENST00000478901 FAM110AQ9BQ89 295 aa12.83□□□□□ -0.36
CDK11A-215ENST00000478901 SLC25A39Q9BZJ4 359 aaPredicted RBP12.83□□□□□ -0.36
CDK11A-215ENST00000478901 HIGD1AQ9Y241 93 aa12.83□□□□□ -0.36
CDK11A-215ENST00000478901 RBMY1BA6NDE4 496 aaKnown RBP12.82□□□□□ -0.36
CDK11A-215ENST00000478901 RBMY1EA6NEQ0 496 aaKnown RBP12.82□□□□□ -0.36
CDK11A-215ENST00000478901 H3BRN7 92 aa12.82□□□□□ -0.36
CDK11A-215ENST00000478901 RBMY1DP0C7P1 496 aaKnown RBP12.82□□□□□ -0.36
CDK11A-215ENST00000478901 RPL29P47914 159 aaKnown RBP12.82□□□□□ -0.36
CDK11A-215ENST00000478901 PRR20EP86478 221 aa12.82□□□□□ -0.36
CDK11A-215ENST00000478901 PRR20CP86479 221 aa12.82□□□□□ -0.36
CDK11A-215ENST00000478901 PRR20DP86480 221 aa12.82□□□□□ -0.36
CDK11A-215ENST00000478901 PRR20BP86481 221 aa12.82□□□□□ -0.36
CDK11A-215ENST00000478901 PRR20AP86496 221 aa12.82□□□□□ -0.36
CDK11A-215ENST00000478901 PXDC1Q5TGL8 231 aa12.82□□□□□ -0.36
CDK11A-215ENST00000478901 LINC00322Q6ZN03 302 aaPredicted RBP12.82□□□□□ -0.36
CDK11A-215ENST00000478901 OR8I2Q8N0Y5 310 aa12.82□□□□□ -0.36
CDK11A-215ENST00000478901 UHRF2Q96PU4 802 aa12.82□□□□□ -0.36
CDK11A-215ENST00000478901 ATP5SQ99766 215 aa12.82□□□□□ -0.36
CDK11A-215ENST00000478901 SHANK2-AS3Q9BTD1 123 aa12.82□□□□□ -0.36
CDK11A-215ENST00000478901 SCRT1Q9BWW7 348 aa12.82□□□□□ -0.36
CDK11A-215ENST00000478901 ARV1Q9H2C2 271 aa12.82□□□□□ -0.36
CDK11A-215ENST00000478901 SLC25A22Q9H936 323 aa12.82□□□□□ -0.36
CDK11A-215ENST00000478901 MAP6D1Q9H9H5 199 aa12.82□□□□□ -0.36
CDK11A-215ENST00000478901 FBXL17Q9UF56 701 aa12.82□□□□□ -0.36
CDK11A-215ENST00000478901 MPDU1O75352 247 aa12.81□□□□□ -0.36
CDK11A-215ENST00000478901 CMC4P56277 68 aaPredicted RBP12.81□□□□□ -0.36
CDK11A-215ENST00000478901 ZNF124Q15973 351 aa12.81□□□□□ -0.36
CDK11A-215ENST00000478901 LEMD1Q68G75 181 aa12.81□□□□□ -0.36
CDK11A-215ENST00000478901 APRG1Q8IVJ8 170 aa12.81□□□□□ -0.36
CDK11A-215ENST00000478901 OR2T35Q8NGX2 323 aa12.81□□□□□ -0.36
CDK11A-215ENST00000478901 TMEM37Q8WXS4 190 aa12.81□□□□□ -0.36
CDK11A-215ENST00000478901 NPCDR1Q9BY65 106 aa12.81□□□□□ -0.36
CDK11A-215ENST00000478901 SMIM3Q9BZL3 60 aa12.81□□□□□ -0.36
CDK11A-215ENST00000478901 SLC25A32Q9H2D1 315 aa12.81□□□□□ -0.36
CDK11A-215ENST00000478901 NRN1Q9NPD7 142 aa12.81□□□□□ -0.36
CDK11A-215ENST00000478901 G3V3Q6 166 aa12.8□□□□□ -0.36
CDK11A-215ENST00000478901 WDR61Q9GZS3 305 aaKnown RBP12.8□□□□□ -0.36
CDK11A-215ENST00000478901 WFDC1Q9HC57 220 aa12.8□□□□□ -0.36
CDK11A-215ENST00000478901 SLC39A9Q9NUM3 307 aa12.8□□□□□ -0.36
CDK11A-215ENST00000478901 PXMP4Q9Y6I8 212 aa12.8□□□□□ -0.36
CDK11A-215ENST00000478901 S100A7P31151 101 aa12.79□□□□□ -0.36
CDK11A-215ENST00000478901 DEFB131AP59861 70 aa12.79□□□□□ -0.36
CDK11A-215ENST00000478901 B2MP61769 119 aa12.79□□□□□ -0.36
CDK11A-215ENST00000478901 Q6ZRG5 221 aa12.79□□□□□ -0.36
CDK11A-215ENST00000478901 C17orf77Q96MU5 243 aa12.79□□□□□ -0.36
CDK11A-215ENST00000478901 AQP10Q96PS8 301 aa12.79□□□□□ -0.36
CDK11A-215ENST00000478901 ELOA3CA0A087WX78 387 aaPredicted RBP12.78□□□□□ -0.36
CDK11A-215ENST00000478901 COX7A2P2O60397 106 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms