RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 GALR1P47211 349 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 ATP5G3P48201 142 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 SUPT4H1P63272 117 aaKnown RBP4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 ZNF79Q15937 498 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 SPATA31B1PQ5VZV4 182 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 OR8G2PQ6IF36 304 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 FAAP20Q6NZ36 180 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 SSX7Q7RTT5 188 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 LHFPL1Q86WI0 220 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 BAP18Q8IXM2 172 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 LGI3Q8N145 548 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 OR4D10Q8NGI6 311 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 OR52E5Q8NH55 327 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 LHFPL5Q8TAF8 219 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 RBPMSQ93062 196 aaKnown RBP4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 C20orf173Q96LM9 149 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 UHRF2Q96PU4 802 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 TMEM222Q9H0R3 208 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 VCX3AQ9NNX9 186 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 LINC00588Q9Y4M8 146 aa4.69□□□□□ -1.66
RTFDC1-206ENST00000477485 TRAV12-2A0A075B6T6 113 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 SNRPGP15A8MWD9 76 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 SOCS3O14543 225 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 B3GALNT1O75752 331 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 SULT1A3P0DMM9 295 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 SULT1A4P0DMN0 295 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 INAFM2P0DMQ5 153 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 PRB4P10163 310 aaPredicted RBP4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 ALDH3B2P48448 385 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 CNN1P51911 297 aaKnown RBP4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 PAX9P55771 341 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 RHOBP62745 196 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 OR5I1Q13606 314 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 TTC32Q5I0X7 151 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 LCE2CQ5TA81 110 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 IGFL4Q6B9Z1 124 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 SELENOHQ8IZQ5 122 aaKnown RBP4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 RNF182Q8N6D2 247 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 ZNF738Q8NE65 137 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 OR52I2Q8NH67 350 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 TERB2Q8NHR7 220 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 DTD1Q8TEA8 209 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 RNF141Q8WVD5 230 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 TMEM170AQ8WVE7 144 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 CLUHP3Q96NS8 147 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 LINC01587Q99440 93 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 RSG1Q9BU20 258 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 SLC25A39Q9BZJ4 359 aaPredicted RBP4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 RBKSQ9H477 322 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 NAA60Q9H7X0 242 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 Q9H8V8 135 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 PRR13Q9NZ81 148 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 EXTL2Q9UBQ6 330 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 DNAH17Q9UFH2 4485 aa4.68□□□□□ -1.66
RTFDC1-206ENST00000477485 A0A0J9YY99 117 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 DUSP14O95147 198 aaKnown RBP4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 CDS2O95674 445 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 AZU1P20160 251 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 TBPP20226 339 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 MEOX2P50222 304 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 TAS2R19P59542 299 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 KRTAP10-2P60368 255 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 VBP1P61758 197 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 NCS1P62166 190 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 HIST1H1AQ02539 215 aaPredicted RBP4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 GAMTQ14353 236 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 NMSQ5H8A3 153 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 C1orf194Q5T5A4 169 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 GPR107Q5VW38 600 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 SAMD13Q5VXD3 122 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 STEAP1BQ6NZ63 245 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 MZT2AQ6P582 158 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 GPR141Q7Z602 305 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 OR11H7Q8NGC8 314 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 OR1S1Q8NH92 325 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 GLYATL2Q8WU03 294 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 GNPNAT1Q96EK6 184 aaPredicted RBP4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 SLC25A32Q9H2D1 315 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 ZNF586Q9NXT0 402 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 PTTG2Q9NZH5 202 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 U3KQ87 197 aa4.67□□□□□ -1.66
RTFDC1-206ENST00000477485 TRAV26-1A0A087WT03 109 aa4.66□□□□□ -1.66
RTFDC1-206ENST00000477485 CBY3A6NI87 242 aa4.66□□□□□ -1.66
RTFDC1-206ENST00000477485 DISC1C4P0D8 188 aa4.66□□□□□ -1.66
RTFDC1-206ENST00000477485 BOLA2-SMG1P6H3BVE0 249 aa4.66□□□□□ -1.66
RTFDC1-206ENST00000477485 ATP6V1G2O95670 118 aa4.66□□□□□ -1.66
RTFDC1-206ENST00000477485 IAPPP10997 89 aa4.66□□□□□ -1.66
RTFDC1-206ENST00000477485 ORM2P19652 201 aa4.66□□□□□ -1.66
RTFDC1-206ENST00000477485 FUSP35637 526 aaKnown RBP eCLIP4.66□□□□□ -1.66
RTFDC1-206ENST00000477485 B2MP61769 119 aa4.66□□□□□ -1.66
RTFDC1-206ENST00000477485 RAB11AP62491 216 aa4.66□□□□□ -1.66
RTFDC1-206ENST00000477485 SMCO1Q147U7 214 aa4.66□□□□□ -1.66
RTFDC1-206ENST00000477485 AARDQ4LEZ3 155 aa4.66□□□□□ -1.66
RTFDC1-206ENST00000477485 AMTNQ6UX39 209 aa4.66□□□□□ -1.66
RTFDC1-206ENST00000477485 TMEM144Q7Z5S9 345 aa4.66□□□□□ -1.66
RTFDC1-206ENST00000477485 TMEM229BQ8NBD8 167 aa4.66□□□□□ -1.66
RTFDC1-206ENST00000477485 OR1B1Q8NGR6 318 aa4.66□□□□□ -1.66
RTFDC1-206ENST00000477485 LRRC20Q8TCA0 184 aa4.66□□□□□ -1.66
RTFDC1-206ENST00000477485 AP3S1Q92572 193 aa4.66□□□□□ -1.66
RTFDC1-206ENST00000477485 YIPF6Q96EC8 236 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms