RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 PLA2G2EQ9NZK7 142 aa13.4□□□□□ -0.26
SREBF1-211ENST00000476994 MRPL27Q9P0M9 148 aaKnown RBP13.4□□□□□ -0.26
SREBF1-211ENST00000476994 K7EMT4 169 aa13.39□□□□□ -0.27
SREBF1-211ENST00000476994 ELLP55199 621 aaPredicted RBP13.39□□□□□ -0.27
SREBF1-211ENST00000476994 EGFEM1PQ0D2K5 195 aa13.39□□□□□ -0.27
SREBF1-211ENST00000476994 GCSAMLQ5JQS6 135 aa13.39□□□□□ -0.27
SREBF1-211ENST00000476994 ADAMTSL5Q6ZMM2 481 aa13.39□□□□□ -0.27
SREBF1-211ENST00000476994 BAP18Q8IXM2 172 aa13.39□□□□□ -0.27
SREBF1-211ENST00000476994 ST8SIA2Q92186 375 aa13.39□□□□□ -0.27
SREBF1-211ENST00000476994 KCNIP2Q9NS61 270 aa13.39□□□□□ -0.27
SREBF1-211ENST00000476994 U3KQE9 123 aa13.39□□□□□ -0.27
SREBF1-211ENST00000476994 C17orf112F2Z3M2 114 aa13.38□□□□□ -0.27
SREBF1-211ENST00000476994 KRTAP10-11P60412 298 aa13.38□□□□□ -0.27
SREBF1-211ENST00000476994 LYZP61626 148 aa13.38□□□□□ -0.27
SREBF1-211ENST00000476994 TM4SF20Q53R12 229 aa13.38□□□□□ -0.27
SREBF1-211ENST00000476994 ZNF709Q8N972 641 aa13.38□□□□□ -0.27
SREBF1-211ENST00000476994 TMEM37Q8WXS4 190 aa13.38□□□□□ -0.27
SREBF1-211ENST00000476994 GNPNAT1Q96EK6 184 aaPredicted RBP13.38□□□□□ -0.27
SREBF1-211ENST00000476994 SLC25A32Q9H2D1 315 aa13.38□□□□□ -0.27
SREBF1-211ENST00000476994 DNAH3Q8TD57 4116 aa13.37□□□□□ -0.27
SREBF1-211ENST00000476994 ZNF207O43670 478 aaKnown RBP13.37□□□□□ -0.27
SREBF1-211ENST00000476994 C8orf88P0DMB2 117 aa13.37□□□□□ -0.27
SREBF1-211ENST00000476994 TPT1P13693 172 aaKnown RBP13.37□□□□□ -0.27
SREBF1-211ENST00000476994 CRYBB3P26998 211 aa13.37□□□□□ -0.27
SREBF1-211ENST00000476994 PXDC1Q5TGL8 231 aa13.37□□□□□ -0.27
SREBF1-211ENST00000476994 OR9G4Q8NGQ1 327 aa13.37□□□□□ -0.27
SREBF1-211ENST00000476994 C20orf24Q9BUV8 137 aa13.37□□□□□ -0.27
SREBF1-211ENST00000476994 VSIRQ9H7M9 311 aa13.37□□□□□ -0.27
SREBF1-211ENST00000476994 DAZ1Q9NQZ3 744 aaKnown RBP13.37□□□□□ -0.27
SREBF1-211ENST00000476994 COL7A1Q02388 2944 aa13.36□□□□□ -0.27
SREBF1-211ENST00000476994 ZNF320A2RRD8 509 aa13.36□□□□□ -0.27
SREBF1-211ENST00000476994 C2orf70A6NJV1 201 aa13.36□□□□□ -0.27
SREBF1-211ENST00000476994 OVOL1O14753 267 aa13.36□□□□□ -0.27
SREBF1-211ENST00000476994 CSN3P07498 182 aa13.36□□□□□ -0.27
SREBF1-211ENST00000476994 SEC11BP0C7V7 166 aa13.36□□□□□ -0.27
SREBF1-211ENST00000476994 C4BPBP20851 252 aa13.36□□□□□ -0.27
SREBF1-211ENST00000476994 EIF5AP63241 154 aaKnown RBP13.36□□□□□ -0.27
SREBF1-211ENST00000476994 SERF2P84101 59 aa13.36□□□□□ -0.27
SREBF1-211ENST00000476994 FFAR4Q5NUL3 377 aa13.36□□□□□ -0.27
SREBF1-211ENST00000476994 DOK5Q9P104 306 aa13.36□□□□□ -0.27
SREBF1-211ENST00000476994 UFC1Q9Y3C8 167 aa13.36□□□□□ -0.27
SREBF1-211ENST00000476994 HYPMO75409 117 aa13.35□□□□□ -0.27
SREBF1-211ENST00000476994 APOHP02749 345 aaPredicted RBP13.35□□□□□ -0.27
SREBF1-211ENST00000476994 ORM2P19652 201 aa13.35□□□□□ -0.27
SREBF1-211ENST00000476994 MORN5Q5VZ52 161 aa13.35□□□□□ -0.27
SREBF1-211ENST00000476994 OR1B1Q8NGR6 318 aa13.35□□□□□ -0.27
SREBF1-211ENST00000476994 PBDC1Q9BVG4 233 aa13.35□□□□□ -0.27
SREBF1-211ENST00000476994 IGHV7-4-1A0A0J9YVY3 117 aa13.34□□□□□ -0.27
SREBF1-211ENST00000476994 H3BRN7 92 aa13.34□□□□□ -0.27
SREBF1-211ENST00000476994 OR5G3P0C626 314 aa13.34□□□□□ -0.27
SREBF1-211ENST00000476994 RAB2AP61019 212 aa13.34□□□□□ -0.27
SREBF1-211ENST00000476994 Q6ZRG5 221 aa13.34□□□□□ -0.27
SREBF1-211ENST00000476994 GATAD1Q8WUU5 269 aa13.34□□□□□ -0.27
SREBF1-211ENST00000476994 TMED6Q8WW62 240 aa13.34□□□□□ -0.27
SREBF1-211ENST00000476994 UHRF2Q96PU4 802 aa13.34□□□□□ -0.27
SREBF1-211ENST00000476994 METTL26Q96S19 204 aa13.34□□□□□ -0.27
SREBF1-211ENST00000476994 B9D2Q9BPU9 175 aa13.34□□□□□ -0.27
SREBF1-211ENST00000476994 DNAJC4Q9NNZ3 241 aa13.34□□□□□ -0.27
SREBF1-211ENST00000476994 PEMTQ9UBM1 199 aa13.34□□□□□ -0.27
SREBF1-211ENST00000476994 SMPXQ9UHP9 88 aa13.34□□□□□ -0.27
SREBF1-211ENST00000476994 RABAC1Q9UI14 185 aa13.34□□□□□ -0.27
SREBF1-211ENST00000476994 HIGD1AQ9Y241 93 aa13.34□□□□□ -0.27
SREBF1-211ENST00000476994 SORL1Q92673 2214 aa13.33□□□□□ -0.27
SREBF1-211ENST00000476994 ELOA3CA0A087WX78 387 aaPredicted RBP13.33□□□□□ -0.28
SREBF1-211ENST00000476994 BUB3O43684 328 aa13.33□□□□□ -0.28
SREBF1-211ENST00000476994 COX7A2P2O60397 106 aa13.33□□□□□ -0.28
SREBF1-211ENST00000476994 M6PRP20645 277 aa13.33□□□□□ -0.28
SREBF1-211ENST00000476994 CBLN1P23435 193 aa13.33□□□□□ -0.28
SREBF1-211ENST00000476994 SPATA31B1PQ5VZV4 182 aa13.33□□□□□ -0.28
SREBF1-211ENST00000476994 OR1L4Q8NGR5 311 aa13.33□□□□□ -0.28
SREBF1-211ENST00000476994 SHANK2-AS3Q9BTD1 123 aa13.33□□□□□ -0.28
SREBF1-211ENST00000476994 SLC25A39Q9BZJ4 359 aaPredicted RBP13.33□□□□□ -0.28
SREBF1-211ENST00000476994 RPRMQ9NS64 109 aa13.33□□□□□ -0.28
SREBF1-211ENST00000476994 SIGLEC8Q9NYZ4 499 aa13.33□□□□□ -0.28
SREBF1-211ENST00000476994 IGHV3-49A0A0A0MS15 119 aa13.32□□□□□ -0.28
SREBF1-211ENST00000476994 CHEK1O14757 476 aa13.32□□□□□ -0.28
SREBF1-211ENST00000476994 FOLR2P14207 255 aa13.32□□□□□ -0.28
SREBF1-211ENST00000476994 NPPCP23582 126 aa13.32□□□□□ -0.28
SREBF1-211ENST00000476994 ACOT6Q3I5F7 207 aaPredicted RBP13.32□□□□□ -0.28
SREBF1-211ENST00000476994 C10orf113Q5VZT2 155 aa13.32□□□□□ -0.28
SREBF1-211ENST00000476994 RPP25LQ8N5L8 163 aaKnown RBP13.32□□□□□ -0.28
SREBF1-211ENST00000476994 MARC2Q969Z3 335 aa13.32□□□□□ -0.28
SREBF1-211ENST00000476994 WWC2-AS2Q96NR7 200 aa13.32□□□□□ -0.28
SREBF1-211ENST00000476994 PFDN5Q99471 154 aa13.32□□□□□ -0.28
SREBF1-211ENST00000476994 SCRT1Q9BWW7 348 aa13.32□□□□□ -0.28
SREBF1-211ENST00000476994 SEPSECSQ9HD40 501 aaKnown RBP13.32□□□□□ -0.28
SREBF1-211ENST00000476994 TECRQ9NZ01 308 aaKnown RBP13.32□□□□□ -0.28
SREBF1-211ENST00000476994 IGHV3OR16-13A0A075B7E8 117 aa13.31□□□□□ -0.28
SREBF1-211ENST00000476994 IGHV3-74A0A0B4J1X5 117 aa13.31□□□□□ -0.28
SREBF1-211ENST00000476994 ZNF98A6NK75 572 aa13.31□□□□□ -0.28
SREBF1-211ENST00000476994 SEC14L6B5MCN3 397 aa13.31□□□□□ -0.28
SREBF1-211ENST00000476994 TMEM41BQ5BJD5 291 aa13.31□□□□□ -0.28
SREBF1-211ENST00000476994 LINC00305Q7Z4B0 112 aa13.31□□□□□ -0.28
SREBF1-211ENST00000476994 GLMPQ8WWB7 406 aa13.31□□□□□ -0.28
SREBF1-211ENST00000476994 MLXQ9UH92 298 aa13.31□□□□□ -0.28
SREBF1-211ENST00000476994 MRPS12O15235 138 aaKnown RBP13.3□□□□□ -0.28
SREBF1-211ENST00000476994 ZNF726P1Q15940 193 aa13.3□□□□□ -0.28
SREBF1-211ENST00000476994 C9orf66Q5T8R8 295 aa13.3□□□□□ -0.28
SREBF1-211ENST00000476994 FAM78BQ5VT40 261 aa13.3□□□□□ -0.28
SREBF1-211ENST00000476994 C16orf54Q6UWD8 224 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms