RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 CAMLGP49069 296 aa9.95□□□□□ -0.82
HLA-DPA1-246ENST00000476642 C1orf194Q5T5A4 169 aa9.95□□□□□ -0.82
HLA-DPA1-246ENST00000476642 Q6ZRG5 221 aa9.95□□□□□ -0.82
HLA-DPA1-246ENST00000476642 TCF24Q7RTU0 167 aa9.95□□□□□ -0.82
HLA-DPA1-246ENST00000476642 INO80EQ8NBZ0 244 aaPredicted RBP9.95□□□□□ -0.82
HLA-DPA1-246ENST00000476642 ST8SIA2Q92186 375 aa9.95□□□□□ -0.82
HLA-DPA1-246ENST00000476642 PRR25Q96S07 402 aa9.95□□□□□ -0.82
HLA-DPA1-246ENST00000476642 RNF2Q99496 336 aa9.95□□□□□ -0.82
HLA-DPA1-246ENST00000476642 U3KQE9 123 aa9.95□□□□□ -0.82
HLA-DPA1-246ENST00000476642 IGHV3-49A0A0A0MS15 119 aa9.94□□□□□ -0.82
HLA-DPA1-246ENST00000476642 TRAV2A0A0B4J234 112 aa9.94□□□□□ -0.82
HLA-DPA1-246ENST00000476642 BUB3O43684 328 aa9.94□□□□□ -0.82
HLA-DPA1-246ENST00000476642 HYPMO75409 117 aa9.94□□□□□ -0.82
HLA-DPA1-246ENST00000476642 IFNA5P01569 189 aa9.94□□□□□ -0.82
HLA-DPA1-246ENST00000476642 LINC00869P0C866 280 aa9.94□□□□□ -0.82
HLA-DPA1-246ENST00000476642 ORM2P19652 201 aa9.94□□□□□ -0.82
HLA-DPA1-246ENST00000476642 PLP1P60201 277 aa9.94□□□□□ -0.82
HLA-DPA1-246ENST00000476642 RPL11P62913 178 aaKnown RBP9.94□□□□□ -0.82
HLA-DPA1-246ENST00000476642 ZNF709Q8N972 641 aa9.94□□□□□ -0.82
HLA-DPA1-246ENST00000476642 ATP5SQ99766 215 aa9.94□□□□□ -0.82
HLA-DPA1-246ENST00000476642 ELOA3CA0A087WX78 387 aaPredicted RBP9.93□□□□□ -0.82
HLA-DPA1-246ENST00000476642 IZUMO1RA6ND01 250 aa9.93□□□□□ -0.82
HLA-DPA1-246ENST00000476642 ZNF785A8K8V0 405 aa9.93□□□□□ -0.82
HLA-DPA1-246ENST00000476642 C17orf112F2Z3M2 114 aa9.93□□□□□ -0.82
HLA-DPA1-246ENST00000476642 DNASE2O00115 360 aaPredicted RBP9.93□□□□□ -0.82
HLA-DPA1-246ENST00000476642 FGF7P21781 194 aa9.93□□□□□ -0.82
HLA-DPA1-246ENST00000476642 RPL29P47914 159 aaKnown RBP9.93□□□□□ -0.82
HLA-DPA1-246ENST00000476642 CLINT1Q14677 625 aa9.93□□□□□ -0.82
HLA-DPA1-246ENST00000476642 FAM90A2PQ658T7 463 aa9.93□□□□□ -0.82
HLA-DPA1-246ENST00000476642 C16orf54Q6UWD8 224 aa9.93□□□□□ -0.82
HLA-DPA1-246ENST00000476642 OR1L4Q8NGR5 311 aa9.93□□□□□ -0.82
HLA-DPA1-246ENST00000476642 OR1B1Q8NGR6 318 aa9.93□□□□□ -0.82
HLA-DPA1-246ENST00000476642 SCGB1C1Q8TD33 95 aa9.93□□□□□ -0.82
HLA-DPA1-246ENST00000476642 GPR82Q96P67 336 aa9.93□□□□□ -0.82
HLA-DPA1-246ENST00000476642 AQP10Q96PS8 301 aa9.93□□□□□ -0.82
HLA-DPA1-246ENST00000476642 MGST2Q99735 147 aa9.93□□□□□ -0.82
HLA-DPA1-246ENST00000476642 HIGD1AQ9Y241 93 aa9.93□□□□□ -0.82
HLA-DPA1-246ENST00000476642 SMAD5-AS1Q9Y6J3 95 aa9.93□□□□□ -0.82
HLA-DPA1-246ENST00000476642 IGHV3OR16-13A0A075B7E8 117 aa9.92□□□□□ -0.82
HLA-DPA1-246ENST00000476642 IGHV3-74A0A0B4J1X5 117 aa9.92□□□□□ -0.82
HLA-DPA1-246ENST00000476642 APOHP02749 345 aaPredicted RBP9.92□□□□□ -0.82
HLA-DPA1-246ENST00000476642 OR5G3P0C626 314 aa9.92□□□□□ -0.82
HLA-DPA1-246ENST00000476642 GATA2P23769 480 aaPredicted RBP9.92□□□□□ -0.82
HLA-DPA1-246ENST00000476642 CD81P60033 236 aa9.92□□□□□ -0.82
HLA-DPA1-246ENST00000476642 ZNF266Q14584 549 aa9.92□□□□□ -0.82
HLA-DPA1-246ENST00000476642 SAMD13Q5VXD3 122 aa9.92□□□□□ -0.82
HLA-DPA1-246ENST00000476642 STPG3Q8N7X2 389 aa9.92□□□□□ -0.82
HLA-DPA1-246ENST00000476642 PFDN5Q99471 154 aa9.92□□□□□ -0.82
HLA-DPA1-246ENST00000476642 FAM110AQ9BQ89 295 aa9.92□□□□□ -0.82
HLA-DPA1-246ENST00000476642 GGTLC1Q9BX51 225 aa9.92□□□□□ -0.82
HLA-DPA1-246ENST00000476642 ARL6Q9H0F7 186 aa9.92□□□□□ -0.82
HLA-DPA1-246ENST00000476642 FXYD6-FXYD2A0A087WZ82 144 aa9.91□□□□□ -0.82
HLA-DPA1-246ENST00000476642 IGHV3-66A0A0C4DH42 116 aa9.91□□□□□ -0.82
HLA-DPA1-246ENST00000476642 K7EIL1 84 aa9.91□□□□□ -0.82
HLA-DPA1-246ENST00000476642 COX7A2P2O60397 106 aa9.91□□□□□ -0.82
HLA-DPA1-246ENST00000476642 OPCMLQ14982 345 aa9.91□□□□□ -0.82
HLA-DPA1-246ENST00000476642 SIGLEC15Q6ZMC9 328 aa9.91□□□□□ -0.82
HLA-DPA1-246ENST00000476642 OR8I2Q8N0Y5 310 aa9.91□□□□□ -0.82
HLA-DPA1-246ENST00000476642 GLMPQ8WWB7 406 aa9.91□□□□□ -0.82
HLA-DPA1-246ENST00000476642 NPCDR1Q9BY65 106 aa9.91□□□□□ -0.82
HLA-DPA1-246ENST00000476642 PARD6GQ9BYG4 376 aaPredicted RBP9.91□□□□□ -0.82
HLA-DPA1-246ENST00000476642 WDR61Q9GZS3 305 aaKnown RBP9.91□□□□□ -0.82
HLA-DPA1-246ENST00000476642 ARV1Q9H2C2 271 aa9.91□□□□□ -0.82
HLA-DPA1-246ENST00000476642 ZNF98A6NK75 572 aa9.9□□□□□ -0.82
HLA-DPA1-246ENST00000476642 RPL7P18124 248 aaKnown RBP9.9□□□□□ -0.82
HLA-DPA1-246ENST00000476642 GALR1P47211 349 aa9.9□□□□□ -0.82
HLA-DPA1-246ENST00000476642 MEOX2P50222 304 aa9.9□□□□□ -0.82
HLA-DPA1-246ENST00000476642 B2MP61769 119 aa9.9□□□□□ -0.82
HLA-DPA1-246ENST00000476642 PRR20EP86478 221 aa9.9□□□□□ -0.82
HLA-DPA1-246ENST00000476642 PRR20CP86479 221 aa9.9□□□□□ -0.82
HLA-DPA1-246ENST00000476642 PRR20DP86480 221 aa9.9□□□□□ -0.82
HLA-DPA1-246ENST00000476642 PRR20BP86481 221 aa9.9□□□□□ -0.82
HLA-DPA1-246ENST00000476642 PRR20AP86496 221 aa9.9□□□□□ -0.82
HLA-DPA1-246ENST00000476642 TMEM182Q6ZP80 229 aaPredicted RBP9.9□□□□□ -0.82
HLA-DPA1-246ENST00000476642 ZNF767PQ75MW2 155 aa9.9□□□□□ -0.82
HLA-DPA1-246ENST00000476642 SLC25A39Q9BZJ4 359 aaPredicted RBP9.9□□□□□ -0.82
HLA-DPA1-246ENST00000476642 MS4A6AQ9H2W1 248 aa9.9□□□□□ -0.82
HLA-DPA1-246ENST00000476642 SEPSECSQ9HD40 501 aaKnown RBP9.9□□□□□ -0.82
HLA-DPA1-246ENST00000476642 SLC39A9Q9NUM3 307 aa9.9□□□□□ -0.82
HLA-DPA1-246ENST00000476642 TNFSF18Q9UNG2 199 aa9.9□□□□□ -0.82
HLA-DPA1-246ENST00000476642 PXMP4Q9Y6I8 212 aa9.9□□□□□ -0.82
HLA-DPA1-246ENST00000476642 IGKV3-7A0A075B6H7 116 aa9.89□□□□□ -0.83
HLA-DPA1-246ENST00000476642 A8MZ25 164 aa9.89□□□□□ -0.83
HLA-DPA1-246ENST00000476642 TAAR5O14804 337 aa9.89□□□□□ -0.83
HLA-DPA1-246ENST00000476642 M6PRP20645 277 aa9.89□□□□□ -0.83
HLA-DPA1-246ENST00000476642 C10orf113Q5VZT2 155 aa9.89□□□□□ -0.83
HLA-DPA1-246ENST00000476642 MIC13Q5XKP0 118 aa9.89□□□□□ -0.83
HLA-DPA1-246ENST00000476642 TCTE3Q8IZS6 198 aa9.89□□□□□ -0.83
HLA-DPA1-246ENST00000476642 Q8N1Y9 231 aa9.89□□□□□ -0.83
HLA-DPA1-246ENST00000476642 STXBP6Q8NFX7 210 aa9.89□□□□□ -0.83
HLA-DPA1-246ENST00000476642 GATAD1Q8WUU5 269 aa9.89□□□□□ -0.83
HLA-DPA1-246ENST00000476642 SHANK2-AS3Q9BTD1 123 aa9.89□□□□□ -0.83
HLA-DPA1-246ENST00000476642 SMIM3Q9BZL3 60 aa9.89□□□□□ -0.83
HLA-DPA1-246ENST00000476642 TUBA4BQ9H853 241 aa9.89□□□□□ -0.83
HLA-DPA1-246ENST00000476642 SLC25A22Q9H936 323 aa9.89□□□□□ -0.83
HLA-DPA1-246ENST00000476642 DNAJC4Q9NNZ3 241 aa9.89□□□□□ -0.83
HLA-DPA1-246ENST00000476642 NRN1Q9NPD7 142 aa9.89□□□□□ -0.83
HLA-DPA1-246ENST00000476642 DOK5Q9P104 306 aa9.89□□□□□ -0.83
HLA-DPA1-246ENST00000476642 BORCS7-ASMTA0A0B4J1R7 106 aa9.88□□□□□ -0.83
HLA-DPA1-246ENST00000476642 HMSDA8MTL9 139 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms