RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 TMEM164Q5U3C3 297 aa14.23□□□□□ -0.13
CCM2-207ENST00000475551 NEGR1Q7Z3B1 354 aa14.23□□□□□ -0.13
CCM2-207ENST00000475551 GATD1Q8NB37 220 aa14.23□□□□□ -0.13
CCM2-207ENST00000475551 OR10AG1Q8NH19 301 aa14.23□□□□□ -0.13
CCM2-207ENST00000475551 MRPL36Q9P0J6 103 aaKnown RBP14.23□□□□□ -0.13
CCM2-207ENST00000475551 NCR2O95944 276 aa14.22□□□□□ -0.13
CCM2-207ENST00000475551 COL8A1P27658 744 aa14.22□□□□□ -0.13
CCM2-207ENST00000475551 OR5AN1Q8NGI8 311 aa14.22□□□□□ -0.13
CCM2-207ENST00000475551 RND1Q92730 232 aa14.22□□□□□ -0.13
CCM2-207ENST00000475551 RABAC1Q9UI14 185 aa14.22□□□□□ -0.13
CCM2-207ENST00000475551 CGB1A6NKQ9 187 aa14.22□□□□□ -0.13
CCM2-207ENST00000475551 ORM2P19652 201 aa14.22□□□□□ -0.13
CCM2-207ENST00000475551 KIR2DL2P43627 348 aaPredicted RBP14.22□□□□□ -0.13
CCM2-207ENST00000475551 DUX4L9Q6RFH8 374 aaPredicted RBP14.22□□□□□ -0.13
CCM2-207ENST00000475551 OR4A5Q8NH83 315 aa14.22□□□□□ -0.13
CCM2-207ENST00000475551 TMEM167AQ8TBQ9 72 aa14.22□□□□□ -0.13
CCM2-207ENST00000475551 Q9H3A6 140 aa14.22□□□□□ -0.13
CCM2-207ENST00000475551 DSCAML1Q8TD84 2053 aa14.22□□□□□ -0.13
CCM2-207ENST00000475551 UQCRFS1P47985 274 aa14.21□□□□□ -0.13
CCM2-207ENST00000475551 FAM201AQ5SY85 155 aa14.21□□□□□ -0.13
CCM2-207ENST00000475551 ZNRD1Q9P1U0 126 aa14.21□□□□□ -0.13
CCM2-207ENST00000475551 SSUH2Q9Y2M2 353 aa14.21□□□□□ -0.13
CCM2-207ENST00000475551 KNTC1P50748 2209 aa14.21□□□□□ -0.13
CCM2-207ENST00000475551 ASPMQ8IZT6 3477 aa14.21□□□□□ -0.13
CCM2-207ENST00000475551 IGHV3-48P01763 117 aa14.21□□□□□ -0.13
CCM2-207ENST00000475551 GP9P14770 177 aa14.21□□□□□ -0.13
CCM2-207ENST00000475551 CEACAM3P40198 252 aa14.21□□□□□ -0.13
CCM2-207ENST00000475551 FOXC1Q12948 553 aa14.21□□□□□ -0.13
CCM2-207ENST00000475551 BOD1L2Q8IYS8 172 aa14.21□□□□□ -0.13
CCM2-207ENST00000475551 MRPL20Q9BYC9 149 aaKnown RBP14.21□□□□□ -0.13
CCM2-207ENST00000475551 TIMM8BQ9Y5J9 83 aaPredicted RBP14.21□□□□□ -0.13
CCM2-207ENST00000475551 A0A1B0GUT8 65 aa14.2□□□□□ -0.14
CCM2-207ENST00000475551 H3BUT2 72 aa14.2□□□□□ -0.14
CCM2-207ENST00000475551 HSD52Q0P140 79 aa14.2□□□□□ -0.14
CCM2-207ENST00000475551 FA2HQ7L5A8 372 aa14.2□□□□□ -0.14
CCM2-207ENST00000475551 Q86TA4 180 aa14.2□□□□□ -0.14
CCM2-207ENST00000475551 OR2K2Q8NGT1 345 aa14.2□□□□□ -0.14
CCM2-207ENST00000475551 SIVA1O15304 175 aa14.2□□□□□ -0.14
CCM2-207ENST00000475551 OR9G4Q8NGQ1 327 aa14.2□□□□□ -0.14
CCM2-207ENST00000475551 A0A0G2JLM5 398 aa14.19□□□□□ -0.14
CCM2-207ENST00000475551 C22orf46C9J442 243 aa14.19□□□□□ -0.14
CCM2-207ENST00000475551 RIGQ13278 110 aa14.19□□□□□ -0.14
CCM2-207ENST00000475551 KIR3DS1Q14943 382 aa14.19□□□□□ -0.14
CCM2-207ENST00000475551 OR5A1Q8NGJ0 315 aa14.19□□□□□ -0.14
CCM2-207ENST00000475551 VSTM2AQ8TAG5 236 aa14.19□□□□□ -0.14
CCM2-207ENST00000475551 FLYWCH2Q96CP2 140 aaKnown RBP14.19□□□□□ -0.14
CCM2-207ENST00000475551 GAFA1Q96PS6 74 aa14.19□□□□□ -0.14
CCM2-207ENST00000475551 TRGV9Q99603 122 aa14.19□□□□□ -0.14
CCM2-207ENST00000475551 DKK4Q9UBT3 224 aa14.19□□□□□ -0.14
CCM2-207ENST00000475551 TMEM11P17152 192 aa14.19□□□□□ -0.14
CCM2-207ENST00000475551 RPRMLQ8N4K4 120 aa14.19□□□□□ -0.14
CCM2-207ENST00000475551 PRSS3P2Q8NHM4 247 aa14.19□□□□□ -0.14
CCM2-207ENST00000475551 FER1L6-AS2Q96M78 137 aa14.19□□□□□ -0.14
CCM2-207ENST00000475551 TANC2Q9HCD6 1990 aa14.19□□□□□ -0.14
CCM2-207ENST00000475551 A0A1B0GW15 77 aa14.18□□□□□ -0.14
CCM2-207ENST00000475551 LGALS9BQ3B8N2 356 aa14.18□□□□□ -0.14
CCM2-207ENST00000475551 LGALS9CQ6DKI2 356 aa14.18□□□□□ -0.14
CCM2-207ENST00000475551 CIARTQ8N365 385 aaPredicted RBP14.18□□□□□ -0.14
CCM2-207ENST00000475551 FAM169BQ8N8A8 192 aa14.18□□□□□ -0.14
CCM2-207ENST00000475551 TMEM178AQ8NBL3 297 aa14.18□□□□□ -0.14
CCM2-207ENST00000475551 CRYGCP07315 174 aa14.18□□□□□ -0.14
CCM2-207ENST00000475551 PIP4P2Q8N4L2 257 aa14.18□□□□□ -0.14
CCM2-207ENST00000475551 JKAMPQ9P055 326 aa14.18□□□□□ -0.14
CCM2-207ENST00000475551 TRBV6-1A0A0K0K1D8 114 aa14.17□□□□□ -0.14
CCM2-207ENST00000475551 A1L4Q6 167 aa14.17□□□□□ -0.14
CCM2-207ENST00000475551 SMAD7O15105 426 aaKnown RBP14.17□□□□□ -0.14
CCM2-207ENST00000475551 SPRY3O43610 288 aa14.17□□□□□ -0.14
CCM2-207ENST00000475551 SMIM17P0DL12 118 aa14.17□□□□□ -0.14
CCM2-207ENST00000475551 GATA4P43694 442 aa14.17□□□□□ -0.14
CCM2-207ENST00000475551 C10orf55Q5SWW7 151 aa14.17□□□□□ -0.14
CCM2-207ENST00000475551 OR4X2Q8NGF9 303 aa14.17□□□□□ -0.14
CCM2-207ENST00000475551 OR10X1Q8NGY0 326 aa14.17□□□□□ -0.14
CCM2-207ENST00000475551 OTORQ9NRC9 128 aa14.17□□□□□ -0.14
CCM2-207ENST00000475551 RNF7Q9UBF6 113 aa14.17□□□□□ -0.14
CCM2-207ENST00000475551 DSCAMO60469 2012 aa14.17□□□□□ -0.14
CCM2-207ENST00000475551 MED13Q9UHV7 2174 aa14.17□□□□□ -0.14
CCM2-207ENST00000475551 ARMS2P0C7Q2 107 aa14.17□□□□□ -0.14
CCM2-207ENST00000475551 APOBEC3AP31941 199 aaPredicted RBP14.17□□□□□ -0.14
CCM2-207ENST00000475551 OR4C13Q8NGP0 309 aa14.17□□□□□ -0.14
CCM2-207ENST00000475551 DYSFO75923 2080 aa14.16□□□□□ -0.14
CCM2-207ENST00000475551 A0A096LNJ9 63 aa14.16□□□□□ -0.14
CCM2-207ENST00000475551 IGLV2-11P01706 119 aa14.16□□□□□ -0.14
CCM2-207ENST00000475551 HOXB4P17483 251 aaPredicted RBP14.16□□□□□ -0.14
CCM2-207ENST00000475551 PLP1P60201 277 aa14.16□□□□□ -0.14
CCM2-207ENST00000475551 ADAMTSL5Q6ZMM2 481 aa14.16□□□□□ -0.14
CCM2-207ENST00000475551 LHFPL4Q7Z7J7 247 aa14.16□□□□□ -0.14
CCM2-207ENST00000475551 C9orf106Q8NAJ2 232 aa14.16□□□□□ -0.14
CCM2-207ENST00000475551 hADV38S2A0JD32 116 aa14.16□□□□□ -0.14
CCM2-207ENST00000475551 IGHG3P01860 377 aa14.16□□□□□ -0.14
CCM2-207ENST00000475551 RBPJQ06330 500 aa14.16□□□□□ -0.14
CCM2-207ENST00000475551 ZNF788Q6ZQV5 615 aa14.16□□□□□ -0.14
CCM2-207ENST00000475551 WFDC8Q8IUA0 241 aa14.16□□□□□ -0.14
CCM2-207ENST00000475551 C8orf46Q8TAG6 207 aa14.16□□□□□ -0.14
CCM2-207ENST00000475551 CCL13Q99616 98 aa14.16□□□□□ -0.14
CCM2-207ENST00000475551 SCNM1Q9BWG6 230 aa14.16□□□□□ -0.14
CCM2-207ENST00000475551 NPFFR1Q9GZQ6 430 aa14.16□□□□□ -0.14
CCM2-207ENST00000475551 PLSCR4Q9NRQ2 329 aa14.16□□□□□ -0.14
CCM2-207ENST00000475551 CELSR3Q9NYQ7 3312 aa14.15□□□□□ -0.14
CCM2-207ENST00000475551 TRAV8-1A0A0A6YYK1 113 aa14.15□□□□□ -0.14
CCM2-207ENST00000475551 A0A1W2PPM0 123 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms