RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 DOK5Q9P104 306 aa11.82□□□□□ -0.52
COL1A1-204ENST00000474644 SMLR1H3BR10 107 aa11.81□□□□□ -0.52
COL1A1-204ENST00000474644 CD5P06127 495 aa11.81□□□□□ -0.52
COL1A1-204ENST00000474644 PLP1P60201 277 aa11.81□□□□□ -0.52
COL1A1-204ENST00000474644 RAB31Q13636 194 aa11.81□□□□□ -0.52
COL1A1-204ENST00000474644 OPCMLQ14982 345 aa11.81□□□□□ -0.52
COL1A1-204ENST00000474644 GTSCR1Q86UQ5 136 aa11.81□□□□□ -0.52
COL1A1-204ENST00000474644 GLMPQ8WWB7 406 aa11.81□□□□□ -0.52
COL1A1-204ENST00000474644 NPCDR1Q9BY65 106 aa11.81□□□□□ -0.52
COL1A1-204ENST00000474644 FBXL17Q9UF56 701 aa11.81□□□□□ -0.52
COL1A1-204ENST00000474644 PFDN2Q9UHV9 154 aa11.81□□□□□ -0.52
COL1A1-204ENST00000474644 TNFSF18Q9UNG2 199 aa11.81□□□□□ -0.52
COL1A1-204ENST00000474644 hCG_2014768A0A024R1R8 64 aa11.8□□□□□ -0.52
COL1A1-204ENST00000474644 IGKV3-7A0A075B6H7 116 aa11.8□□□□□ -0.52
COL1A1-204ENST00000474644 RNF222A6NCQ9 220 aa11.8□□□□□ -0.52
COL1A1-204ENST00000474644 MPDU1O75352 247 aa11.8□□□□□ -0.52
COL1A1-204ENST00000474644 CD81P60033 236 aa11.8□□□□□ -0.52
COL1A1-204ENST00000474644 PRR20EP86478 221 aa11.8□□□□□ -0.52
COL1A1-204ENST00000474644 PRR20CP86479 221 aa11.8□□□□□ -0.52
COL1A1-204ENST00000474644 PRR20DP86480 221 aa11.8□□□□□ -0.52
COL1A1-204ENST00000474644 PRR20BP86481 221 aa11.8□□□□□ -0.52
COL1A1-204ENST00000474644 PRR20AP86496 221 aa11.8□□□□□ -0.52
COL1A1-204ENST00000474644 MIC13Q5XKP0 118 aa11.8□□□□□ -0.52
COL1A1-204ENST00000474644 MRAPQ8TCY5 172 aa11.8□□□□□ -0.52
COL1A1-204ENST00000474644 PPP1R14BQ96C90 147 aa11.8□□□□□ -0.52
COL1A1-204ENST00000474644 WDR61Q9GZS3 305 aaKnown RBP11.8□□□□□ -0.52
COL1A1-204ENST00000474644 HELTA6NFD8 242 aa11.79□□□□□ -0.52
COL1A1-204ENST00000474644 OR4C46A6NHA9 309 aa11.79□□□□□ -0.52
COL1A1-204ENST00000474644 HYPMO75409 117 aa11.79□□□□□ -0.52
COL1A1-204ENST00000474644 CD7P09564 240 aa11.79□□□□□ -0.52
COL1A1-204ENST00000474644 RPL29P47914 159 aaKnown RBP11.79□□□□□ -0.52
COL1A1-204ENST00000474644 PXDC1Q5TGL8 231 aa11.79□□□□□ -0.52
COL1A1-204ENST00000474644 Q8N1Y9 231 aa11.79□□□□□ -0.52
COL1A1-204ENST00000474644 ARL6Q9H0F7 186 aa11.79□□□□□ -0.52
COL1A1-204ENST00000474644 WFDC1Q9HC57 220 aa11.79□□□□□ -0.52
COL1A1-204ENST00000474644 HIGD1AQ9Y241 93 aa11.79□□□□□ -0.52
COL1A1-204ENST00000474644 H3BRN7 92 aa11.78□□□□□ -0.52
COL1A1-204ENST00000474644 OR5G3P0C626 314 aa11.78□□□□□ -0.52
COL1A1-204ENST00000474644 TFPI2P48307 235 aa11.78□□□□□ -0.52
COL1A1-204ENST00000474644 RPL11P62913 178 aaKnown RBP11.78□□□□□ -0.52
COL1A1-204ENST00000474644 PATE2Q6UY27 113 aa11.78□□□□□ -0.52
COL1A1-204ENST00000474644 SIGLEC15Q6ZMC9 328 aa11.78□□□□□ -0.52
COL1A1-204ENST00000474644 GBGT1Q8N5D6 347 aa11.78□□□□□ -0.52
COL1A1-204ENST00000474644 INO80EQ8NBZ0 244 aaPredicted RBP11.78□□□□□ -0.52
COL1A1-204ENST00000474644 UHRF2Q96PU4 802 aa11.78□□□□□ -0.52
COL1A1-204ENST00000474644 NEURL2Q9BR09 285 aa11.78□□□□□ -0.52
COL1A1-204ENST00000474644 SCRT1Q9BWW7 348 aa11.78□□□□□ -0.52
COL1A1-204ENST00000474644 SLC25A39Q9BZJ4 359 aaPredicted RBP11.78□□□□□ -0.52
COL1A1-204ENST00000474644 ARV1Q9H2C2 271 aa11.78□□□□□ -0.52
COL1A1-204ENST00000474644 MS4A6AQ9H2W1 248 aa11.78□□□□□ -0.52
COL1A1-204ENST00000474644 PXMP4Q9Y6I8 212 aa11.78□□□□□ -0.52
COL1A1-204ENST00000474644 SORL1Q92673 2214 aa11.78□□□□□ -0.52
COL1A1-204ENST00000474644 ARPC5O15511 151 aa11.77□□□□□ -0.53
COL1A1-204ENST00000474644 COX7A2P2O60397 106 aa11.77□□□□□ -0.53
COL1A1-204ENST00000474644 IFNA5P01569 189 aa11.77□□□□□ -0.53
COL1A1-204ENST00000474644 B2MP61769 119 aa11.77□□□□□ -0.53
COL1A1-204ENST00000474644 C1orf194Q5T5A4 169 aa11.77□□□□□ -0.53
COL1A1-204ENST00000474644 STXBP6Q8NFX7 210 aa11.77□□□□□ -0.53
COL1A1-204ENST00000474644 ST6GAL2Q96JF0 529 aa11.77□□□□□ -0.53
COL1A1-204ENST00000474644 SHANK2-AS3Q9BTD1 123 aa11.77□□□□□ -0.53
COL1A1-204ENST00000474644 PARD6GQ9BYG4 376 aaPredicted RBP11.77□□□□□ -0.53
COL1A1-204ENST00000474644 SLC25A22Q9H936 323 aa11.77□□□□□ -0.53
COL1A1-204ENST00000474644 SLC39A9Q9NUM3 307 aa11.77□□□□□ -0.53
COL1A1-204ENST00000474644 TRAV2A0A0B4J234 112 aa11.76□□□□□ -0.53
COL1A1-204ENST00000474644 ZNF98A6NK75 572 aa11.76□□□□□ -0.53
COL1A1-204ENST00000474644 S100A7P31151 101 aa11.76□□□□□ -0.53
COL1A1-204ENST00000474644 AP2S1P53680 142 aaPredicted RBP11.76□□□□□ -0.53
COL1A1-204ENST00000474644 PAFAH1B2P68402 229 aa11.76□□□□□ -0.53
COL1A1-204ENST00000474644 ODF3L2Q3SX64 289 aa11.76□□□□□ -0.53
COL1A1-204ENST00000474644 LEMD1Q68G75 181 aa11.76□□□□□ -0.53
COL1A1-204ENST00000474644 Q6ZRG5 221 aa11.76□□□□□ -0.53
COL1A1-204ENST00000474644 TMEM37Q8WXS4 190 aa11.76□□□□□ -0.53
COL1A1-204ENST00000474644 WFDC10AQ9H1F0 79 aa11.76□□□□□ -0.53
COL1A1-204ENST00000474644 SLC25A32Q9H2D1 315 aa11.76□□□□□ -0.53
COL1A1-204ENST00000474644 KCNIP2Q9NS61 270 aa11.76□□□□□ -0.53
COL1A1-204ENST00000474644 SMAD5-AS1Q9Y6J3 95 aa11.76□□□□□ -0.53
COL1A1-204ENST00000474644 A0A1B0GVG6 124 aa11.75□□□□□ -0.53
COL1A1-204ENST00000474644 C17orf112F2Z3M2 114 aa11.75□□□□□ -0.53
COL1A1-204ENST00000474644 DNASE2O00115 360 aaPredicted RBP11.75□□□□□ -0.53
COL1A1-204ENST00000474644 DEFB121Q5J5C9 76 aa11.75□□□□□ -0.53
COL1A1-204ENST00000474644 C10orf113Q5VZT2 155 aa11.75□□□□□ -0.53
COL1A1-204ENST00000474644 LINC00305Q7Z4B0 112 aa11.75□□□□□ -0.53
COL1A1-204ENST00000474644 S100A7AQ86SG5 101 aa11.75□□□□□ -0.53
COL1A1-204ENST00000474644 WFDC3Q8IUB2 231 aa11.75□□□□□ -0.53
COL1A1-204ENST00000474644 OR8I2Q8N0Y5 310 aa11.75□□□□□ -0.53
COL1A1-204ENST00000474644 ZNF709Q8N972 641 aa11.75□□□□□ -0.53
COL1A1-204ENST00000474644 OR11H4Q8NGC9 324 aa11.75□□□□□ -0.53
COL1A1-204ENST00000474644 SCGB1C1Q8TD33 95 aa11.75□□□□□ -0.53
COL1A1-204ENST00000474644 DCANP1Q8TF63 244 aa11.75□□□□□ -0.53
COL1A1-204ENST00000474644 RSG1Q9BU20 258 aa11.75□□□□□ -0.53
COL1A1-204ENST00000474644 C19orf73Q9NVV2 129 aa11.75□□□□□ -0.53
COL1A1-204ENST00000474644 ELOA3CA0A087WX78 387 aaPredicted RBP11.74□□□□□ -0.53
COL1A1-204ENST00000474644 K7EQG2 157 aa11.74□□□□□ -0.53
COL1A1-204ENST00000474644 IGHV4-30-4P0DP06 118 aa11.74□□□□□ -0.53
COL1A1-204ENST00000474644 ZNF266Q14584 549 aa11.74□□□□□ -0.53
COL1A1-204ENST00000474644 TCTE3Q8IZS6 198 aa11.74□□□□□ -0.53
COL1A1-204ENST00000474644 FAM24BQ8N5W8 94 aa11.74□□□□□ -0.53
COL1A1-204ENST00000474644 OR1L4Q8NGR5 311 aa11.74□□□□□ -0.53
COL1A1-204ENST00000474644 GPR82Q96P67 336 aa11.74□□□□□ -0.53
COL1A1-204ENST00000474644 PFDN5Q99471 154 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms