RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 IL17DQ8TAD2 202 aa13.92□□□□□ -0.18
CCDC171-206ENST00000474193 METTL26Q96S19 204 aa13.92□□□□□ -0.18
CCDC171-206ENST00000474193 TMEM231Q9H6L2 316 aa13.92□□□□□ -0.18
CCDC171-206ENST00000474193 PFDN2Q9UHV9 154 aa13.92□□□□□ -0.18
CCDC171-206ENST00000474193 IGKV1OR2-108A0A075B7D4 117 aa13.91□□□□□ -0.18
CCDC171-206ENST00000474193 UBE2L5PA0A1B0GUS4 154 aa13.91□□□□□ -0.18
CCDC171-206ENST00000474193 CASC10Q5T4H9 136 aa13.91□□□□□ -0.18
CCDC171-206ENST00000474193 CYP2G1PQ6ZSU1 146 aa13.91□□□□□ -0.18
CCDC171-206ENST00000474193 PBDC1Q9BVG4 233 aa13.91□□□□□ -0.18
CCDC171-206ENST00000474193 A0A1W2PS18 150 aa13.9□□□□□ -0.18
CCDC171-206ENST00000474193 CHEK1O14757 476 aa13.9□□□□□ -0.18
CCDC171-206ENST00000474193 IFNA5P01569 189 aa13.9□□□□□ -0.18
CCDC171-206ENST00000474193 S100A7P31151 101 aa13.9□□□□□ -0.18
CCDC171-206ENST00000474193 APOC4P55056 127 aa13.9□□□□□ -0.18
CCDC171-206ENST00000474193 VWC2Q2TAL6 325 aa13.9□□□□□ -0.18
CCDC171-206ENST00000474193 AKAP14Q86UN6 197 aa13.9□□□□□ -0.18
CCDC171-206ENST00000474193 RNF125Q96EQ8 232 aa13.9□□□□□ -0.18
CCDC171-206ENST00000474193 AQP10Q96PS8 301 aa13.9□□□□□ -0.18
CCDC171-206ENST00000474193 ATP5SQ99766 215 aa13.9□□□□□ -0.18
CCDC171-206ENST00000474193 ZFAND3Q9H8U3 227 aa13.9□□□□□ -0.18
CCDC171-206ENST00000474193 SMLR1H3BR10 107 aa13.89□□□□□ -0.19
CCDC171-206ENST00000474193 AGPAT2O15120 278 aa13.89□□□□□ -0.19
CCDC171-206ENST00000474193 MPDU1O75352 247 aa13.89□□□□□ -0.19
CCDC171-206ENST00000474193 FGF7P21781 194 aa13.89□□□□□ -0.19
CCDC171-206ENST00000474193 CAMLGP49069 296 aa13.89□□□□□ -0.19
CCDC171-206ENST00000474193 LYZP61626 148 aa13.89□□□□□ -0.19
CCDC171-206ENST00000474193 SCGB1C1Q8TD33 95 aa13.89□□□□□ -0.19
CCDC171-206ENST00000474193 GRAMD2BQ96HH9 432 aa13.89□□□□□ -0.19
CCDC171-206ENST00000474193 RNF2Q99496 336 aa13.89□□□□□ -0.19
CCDC171-206ENST00000474193 FAM110AQ9BQ89 295 aa13.89□□□□□ -0.19
CCDC171-206ENST00000474193 SMIM3Q9BZL3 60 aa13.89□□□□□ -0.19
CCDC171-206ENST00000474193 EDA2RQ9HAV5 297 aa13.89□□□□□ -0.19
CCDC171-206ENST00000474193 UBQLN2Q9UHD9 624 aa13.89□□□□□ -0.19
CCDC171-206ENST00000474193 RABAC1Q9UI14 185 aa13.89□□□□□ -0.19
CCDC171-206ENST00000474193 WDR83OSQ9Y284 106 aa13.89□□□□□ -0.19
CCDC171-206ENST00000474193 HUWE1Q7Z6Z7 4374 aaKnown RBP13.89□□□□□ -0.19
CCDC171-206ENST00000474193 IGHV3-49A0A0A0MS15 119 aa13.88□□□□□ -0.19
CCDC171-206ENST00000474193 DNASE2O00115 360 aaPredicted RBP13.88□□□□□ -0.19
CCDC171-206ENST00000474193 HNRNPCP07910 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCDC171-206ENST00000474193 AP2S1P53680 142 aaPredicted RBP13.88□□□□□ -0.19
CCDC171-206ENST00000474193 RPL11P62913 178 aaKnown RBP13.88□□□□□ -0.19
CCDC171-206ENST00000474193 S100A7AQ86SG5 101 aa13.88□□□□□ -0.19
CCDC171-206ENST00000474193 ZNF709Q8N972 641 aa13.88□□□□□ -0.19
CCDC171-206ENST00000474193 PPP1R14BQ96C90 147 aa13.88□□□□□ -0.19
CCDC171-206ENST00000474193 TNFSF18Q9UNG2 199 aa13.88□□□□□ -0.19
CCDC171-206ENST00000474193 UBE2CO00762 179 aa13.87□□□□□ -0.19
CCDC171-206ENST00000474193 ARPC5O15511 151 aa13.87□□□□□ -0.19
CCDC171-206ENST00000474193 TCF24Q7RTU0 167 aa13.87□□□□□ -0.19
CCDC171-206ENST00000474193 MGST2Q99735 147 aa13.87□□□□□ -0.19
CCDC171-206ENST00000474193 RETNQ9HD89 108 aa13.87□□□□□ -0.19
CCDC171-206ENST00000474193 IGKV3-7A0A075B6H7 116 aa13.86□□□□□ -0.19
CCDC171-206ENST00000474193 IGHV3OR16-13A0A075B7E8 117 aa13.86□□□□□ -0.19
CCDC171-206ENST00000474193 IGHV3-74A0A0B4J1X5 117 aa13.86□□□□□ -0.19
CCDC171-206ENST00000474193 A0A1B0GVG6 124 aa13.86□□□□□ -0.19
CCDC171-206ENST00000474193 C17orf112F2Z3M2 114 aa13.86□□□□□ -0.19
CCDC171-206ENST00000474193 LINC00869P0C866 280 aa13.86□□□□□ -0.19
CCDC171-206ENST00000474193 ORM2P19652 201 aa13.86□□□□□ -0.19
CCDC171-206ENST00000474193 GATA2P23769 480 aaPredicted RBP13.86□□□□□ -0.19
CCDC171-206ENST00000474193 CRYBB3P26998 211 aa13.86□□□□□ -0.19
CCDC171-206ENST00000474193 TFPI2P48307 235 aa13.86□□□□□ -0.19
CCDC171-206ENST00000474193 EIF2B2P49770 351 aaKnown RBP13.86□□□□□ -0.19
CCDC171-206ENST00000474193 ZNF266Q14584 549 aa13.86□□□□□ -0.19
CCDC171-206ENST00000474193 ZFAND6Q6FIF0 208 aa13.86□□□□□ -0.19
CCDC171-206ENST00000474193 Q6ZRG5 221 aa13.86□□□□□ -0.19
CCDC171-206ENST00000474193 TCTE3Q8IZS6 198 aa13.86□□□□□ -0.19
CCDC171-206ENST00000474193 STPG3Q8N7X2 389 aa13.86□□□□□ -0.19
CCDC171-206ENST00000474193 OR1B1Q8NGR6 318 aa13.86□□□□□ -0.19
CCDC171-206ENST00000474193 ZNF414Q96IQ9 312 aa13.86□□□□□ -0.19
CCDC171-206ENST00000474193 ST6GAL2Q96JF0 529 aa13.86□□□□□ -0.19
CCDC171-206ENST00000474193 MFFQ9GZY8 342 aa13.86□□□□□ -0.19
CCDC171-206ENST00000474193 KCNIP2Q9NS61 270 aa13.86□□□□□ -0.19
CCDC171-206ENST00000474193 USF2Q15853 346 aaPredicted RBP13.85□□□□□ -0.19
CCDC171-206ENST00000474193 PXDC1Q5TGL8 231 aa13.85□□□□□ -0.19
CCDC171-206ENST00000474193 WDR61Q9GZS3 305 aaKnown RBP13.85□□□□□ -0.19
CCDC171-206ENST00000474193 FBXL17Q9UF56 701 aa13.85□□□□□ -0.19
CCDC171-206ENST00000474193 SLC45A2Q9UMX9 530 aa13.85□□□□□ -0.19
CCDC171-206ENST00000474193 NBEAL2Q6ZNJ1 2754 aa13.84□□□□□ -0.19
CCDC171-206ENST00000474193 KIR2DL5BA0A0G2JN68 375 aa13.84□□□□□ -0.19
CCDC171-206ENST00000474193 KIR2DL5BA0A0G2JPC4 375 aa13.84□□□□□ -0.19
CCDC171-206ENST00000474193 HMSDA8MTL9 139 aa13.84□□□□□ -0.19
CCDC171-206ENST00000474193 G3V3Q6 166 aa13.84□□□□□ -0.19
CCDC171-206ENST00000474193 HYPMO75409 117 aa13.84□□□□□ -0.19
CCDC171-206ENST00000474193 OR5G3P0C626 314 aa13.84□□□□□ -0.19
CCDC171-206ENST00000474193 Q6ZWC4 215 aa13.84□□□□□ -0.19
CCDC171-206ENST00000474193 KIR2DL5AQ8N109 375 aa13.84□□□□□ -0.19
CCDC171-206ENST00000474193 GBGT1Q8N5D6 347 aa13.84□□□□□ -0.19
CCDC171-206ENST00000474193 KIR2DL5BQ8NHK3 375 aa13.84□□□□□ -0.19
CCDC171-206ENST00000474193 NPCDR1Q9BY65 106 aa13.84□□□□□ -0.19
CCDC171-206ENST00000474193 ARL6Q9H0F7 186 aa13.84□□□□□ -0.19
CCDC171-206ENST00000474193 BORCS7-ASMTA0A0B4J1R7 106 aa13.83□□□□□ -0.2
CCDC171-206ENST00000474193 IGHV3-66A0A0C4DH42 116 aa13.83□□□□□ -0.2
CCDC171-206ENST00000474193 RNF222A6NCQ9 220 aa13.83□□□□□ -0.2
CCDC171-206ENST00000474193 TAAR5O14804 337 aa13.83□□□□□ -0.2
CCDC171-206ENST00000474193 COX7A2P2O60397 106 aa13.83□□□□□ -0.2
CCDC171-206ENST00000474193 RPL29P47914 159 aaKnown RBP13.83□□□□□ -0.2
CCDC171-206ENST00000474193 OPCMLQ14982 345 aa13.83□□□□□ -0.2
CCDC171-206ENST00000474193 ODF3L2Q3SX64 289 aa13.83□□□□□ -0.2
CCDC171-206ENST00000474193 TMEM182Q6ZP80 229 aaPredicted RBP13.83□□□□□ -0.2
CCDC171-206ENST00000474193 WFDC3Q8IUB2 231 aa13.83□□□□□ -0.2
CCDC171-206ENST00000474193 ST8SIA2Q92186 375 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms