RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 CD5P06127 495 aa13.42□□□□□ -0.26
SNX4-204ENST00000473417 SULT1A1P50225 295 aa13.42□□□□□ -0.26
SNX4-204ENST00000473417 CYP2G1PQ6ZSU1 146 aa13.42□□□□□ -0.26
SNX4-204ENST00000473417 BPIFCQ8NFQ6 507 aa13.42□□□□□ -0.26
SNX4-204ENST00000473417 PPP1R1CQ8WVI7 109 aa13.42□□□□□ -0.26
SNX4-204ENST00000473417 GGACTQ9BVM4 153 aa13.42□□□□□ -0.26
SNX4-204ENST00000473417 E5RGE8 158 aa13.41□□□□□ -0.26
SNX4-204ENST00000473417 DNASE2O00115 360 aaPredicted RBP13.41□□□□□ -0.26
SNX4-204ENST00000473417 CXCL3P19876 107 aa13.41□□□□□ -0.26
SNX4-204ENST00000473417 EIF2B2P49770 351 aaKnown RBP13.41□□□□□ -0.26
SNX4-204ENST00000473417 PAFAH1B2P68402 229 aa13.41□□□□□ -0.26
SNX4-204ENST00000473417 OXA1LQ15070 435 aa13.41□□□□□ -0.26
SNX4-204ENST00000473417 C16orf54Q6UWD8 224 aa13.41□□□□□ -0.26
SNX4-204ENST00000473417 STX12Q86Y82 276 aa13.41□□□□□ -0.26
SNX4-204ENST00000473417 MED28Q9H204 178 aa13.41□□□□□ -0.26
SNX4-204ENST00000473417 MS4A6AQ9H2W1 248 aa13.41□□□□□ -0.26
SNX4-204ENST00000473417 DNAH1Q9P2D7 4330 aa13.4□□□□□ -0.26
SNX4-204ENST00000473417 BUB3O43684 328 aa13.4□□□□□ -0.26
SNX4-204ENST00000473417 CFDP00746 253 aaPredicted RBP13.4□□□□□ -0.26
SNX4-204ENST00000473417 ORM2P19652 201 aa13.4□□□□□ -0.26
SNX4-204ENST00000473417 FCN2Q15485 313 aa13.4□□□□□ -0.26
SNX4-204ENST00000473417 TEPPQ6URK8 271 aa13.4□□□□□ -0.26
SNX4-204ENST00000473417 STXBP6Q8NFX7 210 aa13.4□□□□□ -0.26
SNX4-204ENST00000473417 GLMPQ8WWB7 406 aa13.4□□□□□ -0.26
SNX4-204ENST00000473417 PPP1R14BQ96C90 147 aa13.4□□□□□ -0.26
SNX4-204ENST00000473417 MPC2O95563 127 aa13.39□□□□□ -0.27
SNX4-204ENST00000473417 S100A11P31949 105 aa13.39□□□□□ -0.27
SNX4-204ENST00000473417 ODF3L2Q3SX64 289 aa13.39□□□□□ -0.27
SNX4-204ENST00000473417 STPG3Q8N7X2 389 aa13.39□□□□□ -0.27
SNX4-204ENST00000473417 OR1B1Q8NGR6 318 aa13.39□□□□□ -0.27
SNX4-204ENST00000473417 RNF126Q9BV68 326 aa13.39□□□□□ -0.27
SNX4-204ENST00000473417 DOK5Q9P104 306 aa13.39□□□□□ -0.27
SNX4-204ENST00000473417 PFDN2Q9UHV9 154 aa13.39□□□□□ -0.27
SNX4-204ENST00000473417 HELTA6NFD8 242 aa13.38□□□□□ -0.27
SNX4-204ENST00000473417 HBG1P69891 147 aa13.38□□□□□ -0.27
SNX4-204ENST00000473417 HBG2P69892 147 aa13.38□□□□□ -0.27
SNX4-204ENST00000473417 EWSR1Q01844 656 aaKnown RBP eCLIP13.38□□□□□ -0.27
SNX4-204ENST00000473417 NHLH2Q02577 135 aa13.38□□□□□ -0.27
SNX4-204ENST00000473417 OR11H7Q8NGC8 314 aa13.38□□□□□ -0.27
SNX4-204ENST00000473417 GGTLC1Q9BX51 225 aa13.38□□□□□ -0.27
SNX4-204ENST00000473417 SLC25A31Q9H0C2 315 aa13.38□□□□□ -0.27
SNX4-204ENST00000473417 UQCC1Q9NVA1 299 aa13.38□□□□□ -0.27
SNX4-204ENST00000473417 LOC102724200A0A096LPH7 203 aaPredicted RBP13.37□□□□□ -0.27
SNX4-204ENST00000473417 AGPAT2O15120 278 aa13.37□□□□□ -0.27
SNX4-204ENST00000473417 LINC00869P0C866 280 aa13.37□□□□□ -0.27
SNX4-204ENST00000473417 PET100P0DJ07 73 aa13.37□□□□□ -0.27
SNX4-204ENST00000473417 NUP62P37198 522 aaPredicted RBP13.37□□□□□ -0.27
SNX4-204ENST00000473417 AP2S1P53680 142 aaPredicted RBP13.37□□□□□ -0.27
SNX4-204ENST00000473417 SELENOTP62341 195 aa13.37□□□□□ -0.27
SNX4-204ENST00000473417 MGST2Q99735 147 aa13.37□□□□□ -0.27
SNX4-204ENST00000473417 TMEM147Q9BVK8 224 aa13.37□□□□□ -0.27
SNX4-204ENST00000473417 TRAV2A0A0B4J234 112 aa13.36□□□□□ -0.27
SNX4-204ENST00000473417 UBE2L5PA0A1B0GUS4 154 aa13.36□□□□□ -0.27
SNX4-204ENST00000473417 ATP6V1FQ16864 119 aa13.36□□□□□ -0.27
SNX4-204ENST00000473417 VWC2Q2TAL6 325 aa13.36□□□□□ -0.27
SNX4-204ENST00000473417 SIGLEC15Q6ZMC9 328 aa13.36□□□□□ -0.27
SNX4-204ENST00000473417 APRG1Q8IVJ8 170 aa13.36□□□□□ -0.27
SNX4-204ENST00000473417 FAM24BQ8N5W8 94 aa13.36□□□□□ -0.27
SNX4-204ENST00000473417 MBD2Q9UBB5 411 aa13.36□□□□□ -0.27
SNX4-204ENST00000473417 SLC45A2Q9UMX9 530 aa13.36□□□□□ -0.27
SNX4-204ENST00000473417 WDR83OSQ9Y284 106 aa13.36□□□□□ -0.27
SNX4-204ENST00000473417 PLECQ15149 4684 aaKnown RBP13.35□□□□□ -0.27
SNX4-204ENST00000473417 K7EQG2 157 aa13.35□□□□□ -0.27
SNX4-204ENST00000473417 HYPMO75409 117 aa13.35□□□□□ -0.27
SNX4-204ENST00000473417 OR5G3P0C626 314 aa13.35□□□□□ -0.27
SNX4-204ENST00000473417 CMC4P56277 68 aaPredicted RBP13.35□□□□□ -0.27
SNX4-204ENST00000473417 ZNF124Q15973 351 aa13.35□□□□□ -0.27
SNX4-204ENST00000473417 ZNF546Q86UE3 836 aa13.35□□□□□ -0.27
SNX4-204ENST00000473417 OR8I2Q8N0Y5 310 aa13.35□□□□□ -0.27
SNX4-204ENST00000473417 OR5C1Q8NGR4 320 aa13.35□□□□□ -0.27
SNX4-204ENST00000473417 IL17DQ8TAD2 202 aa13.35□□□□□ -0.27
SNX4-204ENST00000473417 SLC25A22Q9H936 323 aa13.35□□□□□ -0.27
SNX4-204ENST00000473417 MAP6D1Q9H9H5 199 aa13.35□□□□□ -0.27
SNX4-204ENST00000473417 ZNF98A6NK75 572 aa13.34□□□□□ -0.27
SNX4-204ENST00000473417 CAMLGP49069 296 aa13.34□□□□□ -0.27
SNX4-204ENST00000473417 DEFB131AP59861 70 aa13.34□□□□□ -0.27
SNX4-204ENST00000473417 RAP2BP61225 183 aa13.34□□□□□ -0.27
SNX4-204ENST00000473417 BAXQ07812 192 aa13.34□□□□□ -0.27
SNX4-204ENST00000473417 RAB31Q13636 194 aa13.34□□□□□ -0.27
SNX4-204ENST00000473417 C1orf194Q5T5A4 169 aa13.34□□□□□ -0.27
SNX4-204ENST00000473417 DCANP1Q8TF63 244 aa13.34□□□□□ -0.27
SNX4-204ENST00000473417 OVOL2Q9BRP0 275 aa13.34□□□□□ -0.27
SNX4-204ENST00000473417 ARL6Q9H0F7 186 aa13.34□□□□□ -0.27
SNX4-204ENST00000473417 HIGD1AQ9Y241 93 aa13.34□□□□□ -0.27
SNX4-204ENST00000473417 PLP1P60201 277 aa13.33□□□□□ -0.28
SNX4-204ENST00000473417 CLINT1Q14677 625 aa13.33□□□□□ -0.28
SNX4-204ENST00000473417 LEMD1Q68G75 181 aa13.33□□□□□ -0.28
SNX4-204ENST00000473417 THAP6Q8TBB0 222 aa13.33□□□□□ -0.28
SNX4-204ENST00000473417 SLC25A39Q9BZJ4 359 aaPredicted RBP13.33□□□□□ -0.28
SNX4-204ENST00000473417 NRN1Q9NPD7 142 aa13.33□□□□□ -0.28
SNX4-204ENST00000473417 FBXL17Q9UF56 701 aa13.33□□□□□ -0.28
SNX4-204ENST00000473417 ZNF688P0C7X2 276 aa13.32□□□□□ -0.28
SNX4-204ENST00000473417 FGF7P21781 194 aa13.32□□□□□ -0.28
SNX4-204ENST00000473417 RPL12P30050 165 aaKnown RBP13.32□□□□□ -0.28
SNX4-204ENST00000473417 S100A7P31151 101 aa13.32□□□□□ -0.28
SNX4-204ENST00000473417 MIC13Q5XKP0 118 aa13.32□□□□□ -0.28
SNX4-204ENST00000473417 PATE2Q6UY27 113 aa13.32□□□□□ -0.28
SNX4-204ENST00000473417 UHRF2Q96PU4 802 aa13.32□□□□□ -0.28
SNX4-204ENST00000473417 SCRT1Q9BWW7 348 aa13.32□□□□□ -0.28
SNX4-204ENST00000473417 ARV1Q9H2C2 271 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms