RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 TMEM147Q9BVK8 224 aa8.5□□□□□ -1.05
CPNE1-222ENST00000473373 WDR12Q9GZL7 423 aaKnown RBP8.5□□□□□ -1.05
CPNE1-222ENST00000473373 DNAH7Q8WXX0 4024 aa8.49□□□□□ -1.05
CPNE1-222ENST00000473373 BUB3O43684 328 aa8.49□□□□□ -1.05
CPNE1-222ENST00000473373 IL5P05113 134 aa8.49□□□□□ -1.05
CPNE1-222ENST00000473373 PVALBP20472 110 aaPredicted RBP8.49□□□□□ -1.05
CPNE1-222ENST00000473373 GALR1P47211 349 aa8.49□□□□□ -1.05
CPNE1-222ENST00000473373 S100A10P60903 97 aa8.49□□□□□ -1.05
CPNE1-222ENST00000473373 RAP2BP61225 183 aa8.49□□□□□ -1.05
CPNE1-222ENST00000473373 NUTF2P61970 127 aaKnown RBP8.49□□□□□ -1.05
CPNE1-222ENST00000473373 ID3Q02535 119 aa8.49□□□□□ -1.05
CPNE1-222ENST00000473373 S100A7AQ86SG5 101 aa8.49□□□□□ -1.05
CPNE1-222ENST00000473373 C12orf45Q8N5I9 185 aaPredicted RBP8.49□□□□□ -1.05
CPNE1-222ENST00000473373 OR11H2Q8NH07 326 aa8.49□□□□□ -1.05
CPNE1-222ENST00000473373 ZNF431Q8TF32 576 aaPredicted RBP8.49□□□□□ -1.05
CPNE1-222ENST00000473373 DCANP1Q8TF63 244 aa8.49□□□□□ -1.05
CPNE1-222ENST00000473373 DOK5Q9P104 306 aa8.49□□□□□ -1.05
CPNE1-222ENST00000473373 RCL1Q9Y2P8 373 aaKnown RBP8.49□□□□□ -1.05
CPNE1-222ENST00000473373 U3KQE9 123 aa8.49□□□□□ -1.05
CPNE1-222ENST00000473373 HYDINQ4G0P3 5121 aa8.49□□□□□ -1.05
CPNE1-222ENST00000473373 DNAH1Q9P2D7 4330 aa8.49□□□□□ -1.05
CPNE1-222ENST00000473373 IGKV1D-37A0A075B6S9 117 aa8.48□□□□□ -1.05
CPNE1-222ENST00000473373 OR5G3P0C626 314 aa8.48□□□□□ -1.05
CPNE1-222ENST00000473373 SPP1P10451 314 aa8.48□□□□□ -1.05
CPNE1-222ENST00000473373 FGL1Q08830 312 aa8.48□□□□□ -1.05
CPNE1-222ENST00000473373 MORN3Q6PF18 240 aaPredicted RBP8.48□□□□□ -1.05
CPNE1-222ENST00000473373 GSG1LQ6UXU4 331 aa8.48□□□□□ -1.05
CPNE1-222ENST00000473373 THAP8Q8NA92 274 aa8.48□□□□□ -1.05
CPNE1-222ENST00000473373 SMIM8Q96KF7 97 aa8.48□□□□□ -1.05
CPNE1-222ENST00000473373 GPN1Q9HCN4 374 aaPredicted RBP8.48□□□□□ -1.05
CPNE1-222ENST00000473373 ATF4P18848 351 aaPredicted RBP8.47□□□□□ -1.05
CPNE1-222ENST00000473373 GATA2P23769 480 aaPredicted RBP8.47□□□□□ -1.05
CPNE1-222ENST00000473373 CAV2P51636 162 aa8.47□□□□□ -1.05
CPNE1-222ENST00000473373 TMEM41BQ5BJD5 291 aa8.47□□□□□ -1.05
CPNE1-222ENST00000473373 C1orf194Q5T5A4 169 aa8.47□□□□□ -1.05
CPNE1-222ENST00000473373 LINC00299Q6ZSB3 139 aa8.47□□□□□ -1.05
CPNE1-222ENST00000473373 CYP2G1PQ6ZSU1 146 aa8.47□□□□□ -1.05
CPNE1-222ENST00000473373 TMEM144Q7Z5S9 345 aa8.47□□□□□ -1.05
CPNE1-222ENST00000473373 C16orf92Q96LL3 132 aa8.47□□□□□ -1.05
CPNE1-222ENST00000473373 PTTG2Q9NZH5 202 aa8.47□□□□□ -1.05
CPNE1-222ENST00000473373 NUPR2A6NF83 97 aa8.46□□□□□ -1.06
CPNE1-222ENST00000473373 GOSR2O14653 212 aa8.46□□□□□ -1.06
CPNE1-222ENST00000473373 TSC22D2O75157 780 aa8.46□□□□□ -1.06
CPNE1-222ENST00000473373 IGKV3-20P01619 116 aa8.46□□□□□ -1.06
CPNE1-222ENST00000473373 MBPP02686 304 aaPredicted RBP8.46□□□□□ -1.06
CPNE1-222ENST00000473373 LINC00869P0C866 280 aa8.46□□□□□ -1.06
CPNE1-222ENST00000473373 TAS2R30P59541 319 aa8.46□□□□□ -1.06
CPNE1-222ENST00000473373 DLK1P80370 383 aa8.46□□□□□ -1.06
CPNE1-222ENST00000473373 EBLN2Q6P2I7 272 aa8.46□□□□□ -1.06
CPNE1-222ENST00000473373 TEPPQ6URK8 271 aa8.46□□□□□ -1.06
CPNE1-222ENST00000473373 TRPT1Q86TN4 253 aaKnown RBP8.46□□□□□ -1.06
CPNE1-222ENST00000473373 OR4B1Q8NGF8 309 aa8.46□□□□□ -1.06
CPNE1-222ENST00000473373 LRRC20Q8TCA0 184 aa8.46□□□□□ -1.06
CPNE1-222ENST00000473373 C1QTNF4Q9BXJ3 329 aa8.46□□□□□ -1.06
CPNE1-222ENST00000473373 NPVFQ9HCQ7 196 aa8.46□□□□□ -1.06
CPNE1-222ENST00000473373 CLEC5AQ9NY25 188 aa8.46□□□□□ -1.06
CPNE1-222ENST00000473373 HIGD1AQ9Y241 93 aa8.46□□□□□ -1.06
CPNE1-222ENST00000473373 KLK5Q9Y337 293 aaPredicted RBP8.46□□□□□ -1.06
CPNE1-222ENST00000473373 IGKV1OR2-108A0A075B7D4 117 aa8.45□□□□□ -1.06
CPNE1-222ENST00000473373 DEFB4AO15263 64 aa8.45□□□□□ -1.06
CPNE1-222ENST00000473373 UPK1BO75841 260 aa8.45□□□□□ -1.06
CPNE1-222ENST00000473373 CCNKO75909 580 aa8.45□□□□□ -1.06
CPNE1-222ENST00000473373 PSMB3P49720 205 aa8.45□□□□□ -1.06
CPNE1-222ENST00000473373 MEOX2P50222 304 aa8.45□□□□□ -1.06
CPNE1-222ENST00000473373 DEFA1P59665 94 aa8.45□□□□□ -1.06
CPNE1-222ENST00000473373 DEFA3P59666 94 aa8.45□□□□□ -1.06
CPNE1-222ENST00000473373 SELENOTP62341 195 aa8.45□□□□□ -1.06
CPNE1-222ENST00000473373 SAMD13Q5VXD3 122 aa8.45□□□□□ -1.06
CPNE1-222ENST00000473373 C2orf50Q96LR7 162 aa8.45□□□□□ -1.06
CPNE1-222ENST00000473373 GPR82Q96P67 336 aa8.45□□□□□ -1.06
CPNE1-222ENST00000473373 RSG1Q9BU20 258 aa8.45□□□□□ -1.06
CPNE1-222ENST00000473373 STARD9Q9P2P6 4700 aa8.45□□□□□ -1.06
CPNE1-222ENST00000473373 LYSTQ99698 3801 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 IGHV3OR16-12A0A075B7B8 117 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 C7orf66A4D0T2 115 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 ZNF98A6NK75 572 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 PRSS46E5RG02 174 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 K7EPK0 472 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 HYPMO75409 117 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 SLC38A11Q08AI6 406 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 ASAH1Q13510 395 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 RAB31Q13636 194 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 TMEM14EPQ6UXP3 125 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 STX12Q86Y82 276 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 C11orf45Q8TAV5 145 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 KRTAP17-1Q9BYP8 105 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 MFFQ9GZY8 342 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 ARL6Q9H0F7 186 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 SLC25A32Q9H2D1 315 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 SEPSECSQ9HD40 501 aaKnown RBP8.44□□□□□ -1.06
CPNE1-222ENST00000473373 RPRMQ9NS64 109 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 XCL2Q9UBD3 114 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 TBC1D24Q9ULP9 559 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 SLC45A2Q9UMX9 530 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 RNF24Q9Y225 148 aa8.44□□□□□ -1.06
CPNE1-222ENST00000473373 A6NHS1 94 aa8.43□□□□□ -1.06
CPNE1-222ENST00000473373 ISLRO14498 428 aa8.43□□□□□ -1.06
CPNE1-222ENST00000473373 COX7A2P2O60397 106 aa8.43□□□□□ -1.06
CPNE1-222ENST00000473373 CST7O76096 145 aa8.43□□□□□ -1.06
CPNE1-222ENST00000473373 RLN2P04090 185 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms