RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 AGPAT2O15120 278 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 NUPL2O15504 423 aaKnown RBP6.83□□□□□ -1.32
SF3A1-206ENST00000471037 TRBV12-3P01733 135 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 IGHV3-23P01764 117 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 ATP6V0CP27449 155 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 OR10J1P30954 320 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 GPR183P32249 361 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 CAMLGP49069 296 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 SELENOTP62341 195 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 RPEL1Q2QD12 228 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 SPSB3Q6PJ21 355 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 CLEC19AQ6UXS0 136 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 CYP2G1PQ6ZSU1 146 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 HSD17B11Q8NBQ5 300 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 PHYHIPLQ96FC7 376 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 MGST2Q99735 147 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 PSMG3Q9BT73 122 aaPredicted RBP6.83□□□□□ -1.32
SF3A1-206ENST00000471037 GGTLC1Q9BX51 225 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 NPCDR1Q9BY65 106 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 RETNQ9HD89 108 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 PEMTQ9UBM1 199 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 S4R3C0 116 aa6.83□□□□□ -1.32
SF3A1-206ENST00000471037 IGKV1D-37A0A075B6S9 117 aa6.82□□□□□ -1.32
SF3A1-206ENST00000471037 OR2T8A6NH00 312 aa6.82□□□□□ -1.32
SF3A1-206ENST00000471037 TGOLN2O43493 480 aa6.82□□□□□ -1.32
SF3A1-206ENST00000471037 CFDP00746 253 aaPredicted RBP6.82□□□□□ -1.32
SF3A1-206ENST00000471037 IGKV1-17P01599 117 aa6.82□□□□□ -1.32
SF3A1-206ENST00000471037 CLEC3BP05452 202 aa6.82□□□□□ -1.32
SF3A1-206ENST00000471037 SEC11BP0C7V7 166 aa6.82□□□□□ -1.32
SF3A1-206ENST00000471037 SPP1P10451 314 aa6.82□□□□□ -1.32
SF3A1-206ENST00000471037 RPL29P47914 159 aaKnown RBP6.82□□□□□ -1.32
SF3A1-206ENST00000471037 CD81P60033 236 aa6.82□□□□□ -1.32
SF3A1-206ENST00000471037 YPEL3P61236 119 aaPredicted RBP6.82□□□□□ -1.32
SF3A1-206ENST00000471037 SERF2P84101 59 aa6.82□□□□□ -1.32
SF3A1-206ENST00000471037 OR2G3Q8NGZ4 309 aa6.82□□□□□ -1.32
SF3A1-206ENST00000471037 FAM110AQ9BQ89 295 aa6.82□□□□□ -1.32
SF3A1-206ENST00000471037 RSG1Q9BU20 258 aa6.82□□□□□ -1.32
SF3A1-206ENST00000471037 SLC45A2Q9UMX9 530 aa6.82□□□□□ -1.32
SF3A1-206ENST00000471037 TOMM40O96008 361 aa6.81□□□□□ -1.32
SF3A1-206ENST00000471037 CTSGP08311 255 aa6.81□□□□□ -1.32
SF3A1-206ENST00000471037 ARL3P36405 182 aa6.81□□□□□ -1.32
SF3A1-206ENST00000471037 PRR20EP86478 221 aa6.81□□□□□ -1.32
SF3A1-206ENST00000471037 PRR20CP86479 221 aa6.81□□□□□ -1.32
SF3A1-206ENST00000471037 PRR20DP86480 221 aa6.81□□□□□ -1.32
SF3A1-206ENST00000471037 PRR20BP86481 221 aa6.81□□□□□ -1.32
SF3A1-206ENST00000471037 PRR20AP86496 221 aa6.81□□□□□ -1.32
SF3A1-206ENST00000471037 RELQ04864 619 aaPredicted RBP6.81□□□□□ -1.32
SF3A1-206ENST00000471037 TIGITQ495A1 244 aa6.81□□□□□ -1.32
SF3A1-206ENST00000471037 ZNF600Q6ZNG1 722 aa6.81□□□□□ -1.32
SF3A1-206ENST00000471037 BPIFCQ8NFQ6 507 aa6.81□□□□□ -1.32
SF3A1-206ENST00000471037 SH3BGRL3Q9H299 93 aa6.81□□□□□ -1.32
SF3A1-206ENST00000471037 SLC25A32Q9H2D1 315 aa6.81□□□□□ -1.32
SF3A1-206ENST00000471037 PXMP4Q9Y6I8 212 aa6.81□□□□□ -1.32
SF3A1-206ENST00000471037 RBMY1BA6NDE4 496 aaKnown RBP6.8□□□□□ -1.32
SF3A1-206ENST00000471037 RBMY1EA6NEQ0 496 aaKnown RBP6.8□□□□□ -1.32
SF3A1-206ENST00000471037 ZNF785A8K8V0 405 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 UMAD1C9J7I0 102 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 BMPR1BO00238 502 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 GGCTO75223 188 aaKnown RBP6.8□□□□□ -1.32
SF3A1-206ENST00000471037 OR2C1O95371 312 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 IFNA7P01567 189 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 MBP02144 154 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 CD7P09564 240 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 RBMY1DP0C7P1 496 aaKnown RBP6.8□□□□□ -1.32
SF3A1-206ENST00000471037 LINC00869P0C866 280 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 RD3LP0DJH9 198 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 PSG1P11464 419 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 ADMP35318 185 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 B2MP61769 119 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 ZNF90Q03938 601 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 CD300EQ496F6 205 aaPredicted RBP6.8□□□□□ -1.32
SF3A1-206ENST00000471037 FFAR4Q5NUL3 377 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 PXDC1Q5TGL8 231 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 MIC13Q5XKP0 118 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 TEX261Q6UWH6 196 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 Q6ZRG5 221 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 STPG3Q8N7X2 389 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 OR51G1Q8NGK1 321 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 Q8WTZ3 238 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 TMED6Q8WW62 240 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 LINC00476Q8WZB0 136 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 CHRDL1Q9BU40 450 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 SLC39A9Q9NUM3 307 aa6.8□□□□□ -1.32
SF3A1-206ENST00000471037 PPP5D1E7EU14 171 aa6.79□□□□□ -1.32
SF3A1-206ENST00000471037 RAB5CP51148 216 aa6.79□□□□□ -1.32
SF3A1-206ENST00000471037 PLP1P60201 277 aa6.79□□□□□ -1.32
SF3A1-206ENST00000471037 DEFB114Q30KQ6 69 aa6.79□□□□□ -1.32
SF3A1-206ENST00000471037 ACOT6Q3I5F7 207 aaPredicted RBP6.79□□□□□ -1.32
SF3A1-206ENST00000471037 AKR1C8PQ5T2L2 129 aa6.79□□□□□ -1.32
SF3A1-206ENST00000471037 DEFB125Q8N687 156 aa6.79□□□□□ -1.32
SF3A1-206ENST00000471037 ZNF680Q8NEM1 530 aa6.79□□□□□ -1.32
SF3A1-206ENST00000471037 OR1L4Q8NGR5 311 aa6.79□□□□□ -1.32
SF3A1-206ENST00000471037 PFDN5Q99471 154 aa6.79□□□□□ -1.32
SF3A1-206ENST00000471037 SRD5A3Q9H8P0 318 aa6.79□□□□□ -1.32
SF3A1-206ENST00000471037 ELOA3CA0A087WX78 387 aaPredicted RBP6.78□□□□□ -1.32
SF3A1-206ENST00000471037 OR11H12B2RN74 326 aa6.78□□□□□ -1.32
SF3A1-206ENST00000471037 NDUFA4O00483 81 aa6.78□□□□□ -1.32
SF3A1-206ENST00000471037 YIF1AO95070 293 aa6.78□□□□□ -1.32
SF3A1-206ENST00000471037 IL4P05112 153 aa6.78□□□□□ -1.32
SF3A1-206ENST00000471037 M6PRP20645 277 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms