RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 A0A1W2PS18 150 aa12.94□□□□□ -0.34
VARS2-204ENST00000467717 HYPMO75409 117 aa12.94□□□□□ -0.34
VARS2-204ENST00000467717 JTBO76095 146 aa12.94□□□□□ -0.34
VARS2-204ENST00000467717 B2MP61769 119 aa12.94□□□□□ -0.34
VARS2-204ENST00000467717 RPL7L1Q6DKI1 246 aaKnown RBP12.94□□□□□ -0.34
VARS2-204ENST00000467717 ARPC5LQ9BPX5 153 aa12.94□□□□□ -0.34
VARS2-204ENST00000467717 RHPN1-AS1Q9BWJ2 59 aa12.94□□□□□ -0.34
VARS2-204ENST00000467717 ARL6Q9H0F7 186 aa12.94□□□□□ -0.34
VARS2-204ENST00000467717 TMEM231Q9H6L2 316 aa12.94□□□□□ -0.34
VARS2-204ENST00000467717 SLC39A9Q9NUM3 307 aa12.94□□□□□ -0.34
VARS2-204ENST00000467717 TECRQ9NZ01 308 aaKnown RBP12.94□□□□□ -0.34
VARS2-204ENST00000467717 IGHV3OR16-13A0A075B7E8 117 aa12.93□□□□□ -0.34
VARS2-204ENST00000467717 IGHV3-74A0A0B4J1X5 117 aa12.93□□□□□ -0.34
VARS2-204ENST00000467717 CHEK1O14757 476 aa12.93□□□□□ -0.34
VARS2-204ENST00000467717 APOHP02749 345 aaPredicted RBP12.93□□□□□ -0.34
VARS2-204ENST00000467717 S100A7P31151 101 aa12.93□□□□□ -0.34
VARS2-204ENST00000467717 OXLD1Q5BKU9 147 aa12.93□□□□□ -0.34
VARS2-204ENST00000467717 TMUB2Q71RG4 321 aa12.93□□□□□ -0.34
VARS2-204ENST00000467717 RSG1Q9BU20 258 aa12.93□□□□□ -0.34
VARS2-204ENST00000467717 VSIRQ9H7M9 311 aa12.93□□□□□ -0.34
VARS2-204ENST00000467717 CYTL1Q9NRR1 136 aa12.93□□□□□ -0.34
VARS2-204ENST00000467717 DOK5Q9P104 306 aa12.93□□□□□ -0.34
VARS2-204ENST00000467717 MLXQ9UH92 298 aa12.93□□□□□ -0.34
VARS2-204ENST00000467717 U3KQE9 123 aa12.93□□□□□ -0.34
VARS2-204ENST00000467717 KANTRA0A1W2PQU2 76 aa12.92□□□□□ -0.34
VARS2-204ENST00000467717 BCL2L11O43521 198 aa12.92□□□□□ -0.34
VARS2-204ENST00000467717 IGLV1-51P01701 117 aa12.92□□□□□ -0.34
VARS2-204ENST00000467717 OR5G3P0C626 314 aa12.92□□□□□ -0.34
VARS2-204ENST00000467717 DEFB114Q30KQ6 69 aa12.92□□□□□ -0.34
VARS2-204ENST00000467717 LGALSLQ3ZCW2 172 aaPredicted RBP12.92□□□□□ -0.34
VARS2-204ENST00000467717 S100A7AQ86SG5 101 aa12.92□□□□□ -0.34
VARS2-204ENST00000467717 HSD17B11Q8NBQ5 300 aa12.92□□□□□ -0.34
VARS2-204ENST00000467717 ST8SIA2Q92186 375 aa12.92□□□□□ -0.34
VARS2-204ENST00000467717 PPP1R14BQ96C90 147 aa12.92□□□□□ -0.34
VARS2-204ENST00000467717 GRAMD2BQ96HH9 432 aa12.92□□□□□ -0.34
VARS2-204ENST00000467717 ARV1Q9H2C2 271 aa12.92□□□□□ -0.34
VARS2-204ENST00000467717 HIGD1AQ9Y241 93 aa12.92□□□□□ -0.34
VARS2-204ENST00000467717 TIMM9Q9Y5J7 89 aa12.92□□□□□ -0.34
VARS2-204ENST00000467717 ELOA3CA0A087WX78 387 aaPredicted RBP12.91□□□□□ -0.34
VARS2-204ENST00000467717 IGHV3-66A0A0C4DH42 116 aa12.91□□□□□ -0.34
VARS2-204ENST00000467717 BUB3O43684 328 aa12.91□□□□□ -0.34
VARS2-204ENST00000467717 COX7A2P2O60397 106 aa12.91□□□□□ -0.34
VARS2-204ENST00000467717 SAMD5Q5TGI4 173 aa12.91□□□□□ -0.34
VARS2-204ENST00000467717 OR1L4Q8NGR5 311 aa12.91□□□□□ -0.34
VARS2-204ENST00000467717 OR2K2Q8NGT1 345 aa12.91□□□□□ -0.34
VARS2-204ENST00000467717 TMEM37Q8WXS4 190 aa12.91□□□□□ -0.34
VARS2-204ENST00000467717 RNF2Q99496 336 aa12.91□□□□□ -0.34
VARS2-204ENST00000467717 G3V4G9 280 aa12.9□□□□□ -0.34
VARS2-204ENST00000467717 CD5P06127 495 aa12.9□□□□□ -0.34
VARS2-204ENST00000467717 ATP6V0CP27449 155 aa12.9□□□□□ -0.34
VARS2-204ENST00000467717 CD300EQ496F6 205 aaPredicted RBP12.9□□□□□ -0.34
VARS2-204ENST00000467717 LAMTOR1Q6IAA8 161 aa12.9□□□□□ -0.34
VARS2-204ENST00000467717 PATE2Q6UY27 113 aa12.9□□□□□ -0.34
VARS2-204ENST00000467717 C9orf62Q8N4C0 152 aa12.9□□□□□ -0.34
VARS2-204ENST00000467717 GNPNAT1Q96EK6 184 aaPredicted RBP12.9□□□□□ -0.34
VARS2-204ENST00000467717 PFDN5Q99471 154 aa12.9□□□□□ -0.34
VARS2-204ENST00000467717 PSMG3Q9BT73 122 aaPredicted RBP12.9□□□□□ -0.34
VARS2-204ENST00000467717 SLC25A39Q9BZJ4 359 aaPredicted RBP12.9□□□□□ -0.34
VARS2-204ENST00000467717 DNAJC4Q9NNZ3 241 aa12.9□□□□□ -0.34
VARS2-204ENST00000467717 DNAH3Q8TD57 4116 aa12.89□□□□□ -0.35
VARS2-204ENST00000467717 C1orf194Q5T5A4 169 aa12.89□□□□□ -0.35
VARS2-204ENST00000467717 C10orf113Q5VZT2 155 aa12.89□□□□□ -0.35
VARS2-204ENST00000467717 C16orf54Q6UWD8 224 aa12.89□□□□□ -0.35
VARS2-204ENST00000467717 RBPMS2Q6ZRY4 209 aaKnown RBP12.89□□□□□ -0.35
VARS2-204ENST00000467717 GATAD1Q8WUU5 269 aa12.89□□□□□ -0.35
VARS2-204ENST00000467717 SHANK2-AS3Q9BTD1 123 aa12.89□□□□□ -0.35
VARS2-204ENST00000467717 ZNF471Q9BX82 626 aaPredicted RBP12.89□□□□□ -0.35
VARS2-204ENST00000467717 ZMAT5Q9UDW3 170 aaKnown RBP12.89□□□□□ -0.35
VARS2-204ENST00000467717 RNF24Q9Y225 148 aa12.89□□□□□ -0.35
VARS2-204ENST00000467717 NOTCH1P46531 2555 aa12.88□□□□□ -0.35
VARS2-204ENST00000467717 TRAV25A0A0B4J276 109 aa12.88□□□□□ -0.35
VARS2-204ENST00000467717 ZNF98A6NK75 572 aa12.88□□□□□ -0.35
VARS2-204ENST00000467717 H3BRN7 92 aa12.88□□□□□ -0.35
VARS2-204ENST00000467717 EIF5AP63241 154 aaKnown RBP12.88□□□□□ -0.35
VARS2-204ENST00000467717 GCSAMLQ5JQS6 135 aa12.88□□□□□ -0.35
VARS2-204ENST00000467717 FFAR4Q5NUL3 377 aa12.88□□□□□ -0.35
VARS2-204ENST00000467717 LCN12Q6JVE5 192 aa12.88□□□□□ -0.35
VARS2-204ENST00000467717 LINC00305Q7Z4B0 112 aa12.88□□□□□ -0.35
VARS2-204ENST00000467717 TMEM61Q8N0U2 210 aa12.88□□□□□ -0.35
VARS2-204ENST00000467717 OR2G3Q8NGZ4 309 aa12.88□□□□□ -0.35
VARS2-204ENST00000467717 UHRF2Q96PU4 802 aa12.88□□□□□ -0.35
VARS2-204ENST00000467717 SELENOKQ9Y6D0 94 aa12.88□□□□□ -0.35
VARS2-204ENST00000467717 HELTA6NFD8 242 aa12.87□□□□□ -0.35
VARS2-204ENST00000467717 C4BPBP20851 252 aa12.87□□□□□ -0.35
VARS2-204ENST00000467717 SERF2P84101 59 aa12.87□□□□□ -0.35
VARS2-204ENST00000467717 EGFEM1PQ0D2K5 195 aa12.87□□□□□ -0.35
VARS2-204ENST00000467717 FAM90A2PQ658T7 463 aa12.87□□□□□ -0.35
VARS2-204ENST00000467717 TCF24Q7RTU0 167 aa12.87□□□□□ -0.35
VARS2-204ENST00000467717 OR8I2Q8N0Y5 310 aa12.87□□□□□ -0.35
VARS2-204ENST00000467717 GLMPQ8WWB7 406 aa12.87□□□□□ -0.35
VARS2-204ENST00000467717 SCRT1Q9BWW7 348 aa12.87□□□□□ -0.35
VARS2-204ENST00000467717 SH3BGRL3Q9H299 93 aa12.87□□□□□ -0.35
VARS2-204ENST00000467717 RFNGQ9Y644 331 aa12.87□□□□□ -0.35
VARS2-204ENST00000467717 IZUMO1RA6ND01 250 aa12.86□□□□□ -0.35
VARS2-204ENST00000467717 TSPAN4O14817 238 aa12.86□□□□□ -0.35
VARS2-204ENST00000467717 NKX2-5P52952 324 aaPredicted RBP12.86□□□□□ -0.35
VARS2-204ENST00000467717 SLC25A32Q9H2D1 315 aa12.86□□□□□ -0.35
VARS2-204ENST00000467717 SLC25A22Q9H936 323 aa12.86□□□□□ -0.35
VARS2-204ENST00000467717 MBP02144 154 aa12.85□□□□□ -0.35
VARS2-204ENST00000467717 TPT1P13693 172 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms