RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ZNF320A2RRD8 509 aa8.46□□□□□ -1.06
VCP-204ENST00000466100 APOHP02749 345 aaPredicted RBP8.46□□□□□ -1.06
VCP-204ENST00000466100 CSN3P07498 182 aa8.46□□□□□ -1.06
VCP-204ENST00000466100 TPT1P13693 172 aaKnown RBP8.46□□□□□ -1.06
VCP-204ENST00000466100 GCSAMLQ5JQS6 135 aa8.46□□□□□ -1.06
VCP-204ENST00000466100 FFAR4Q5NUL3 377 aa8.46□□□□□ -1.06
VCP-204ENST00000466100 BAP18Q8IXM2 172 aa8.46□□□□□ -1.06
VCP-204ENST00000466100 WFDC9Q8NEX5 89 aa8.46□□□□□ -1.06
VCP-204ENST00000466100 ST8SIA2Q92186 375 aa8.46□□□□□ -1.06
VCP-204ENST00000466100 PBDC1Q9BVG4 233 aa8.46□□□□□ -1.06
VCP-204ENST00000466100 SLC25A32Q9H2D1 315 aa8.46□□□□□ -1.06
VCP-204ENST00000466100 PLA2G2EQ9NZK7 142 aa8.46□□□□□ -1.06
VCP-204ENST00000466100 DOK5Q9P104 306 aa8.46□□□□□ -1.06
VCP-204ENST00000466100 IGHV7-4-1A0A0J9YVY3 117 aa8.45□□□□□ -1.06
VCP-204ENST00000466100 H3BRN7 92 aa8.45□□□□□ -1.06
VCP-204ENST00000466100 HYPMO75409 117 aa8.45□□□□□ -1.06
VCP-204ENST00000466100 OR5G3P0C626 314 aa8.45□□□□□ -1.06
VCP-204ENST00000466100 SEC11BP0C7V7 166 aa8.45□□□□□ -1.06
VCP-204ENST00000466100 FOLR2P14207 255 aa8.45□□□□□ -1.06
VCP-204ENST00000466100 ORM2P19652 201 aa8.45□□□□□ -1.06
VCP-204ENST00000466100 C4BPBP20851 252 aa8.45□□□□□ -1.06
VCP-204ENST00000466100 EIF5AP63241 154 aaKnown RBP8.45□□□□□ -1.06
VCP-204ENST00000466100 SERF2P84101 59 aa8.45□□□□□ -1.06
VCP-204ENST00000466100 OR1B1Q8NGR6 318 aa8.45□□□□□ -1.06
VCP-204ENST00000466100 VSIRQ9H7M9 311 aa8.45□□□□□ -1.06
VCP-204ENST00000466100 SIGLEC8Q9NYZ4 499 aa8.45□□□□□ -1.06
VCP-204ENST00000466100 PEMTQ9UBM1 199 aa8.45□□□□□ -1.06
VCP-204ENST00000466100 SMPXQ9UHP9 88 aa8.45□□□□□ -1.06
VCP-204ENST00000466100 RABAC1Q9UI14 185 aa8.45□□□□□ -1.06
VCP-204ENST00000466100 SORL1Q92673 2214 aa8.45□□□□□ -1.06
VCP-204ENST00000466100 ELOA3CA0A087WX78 387 aaPredicted RBP8.44□□□□□ -1.06
VCP-204ENST00000466100 IGHV3-49A0A0A0MS15 119 aa8.44□□□□□ -1.06
VCP-204ENST00000466100 BUB3O43684 328 aa8.44□□□□□ -1.06
VCP-204ENST00000466100 COX7A2P2O60397 106 aa8.44□□□□□ -1.06
VCP-204ENST00000466100 CBLN1P23435 193 aa8.44□□□□□ -1.06
VCP-204ENST00000466100 NPPCP23582 126 aa8.44□□□□□ -1.06
VCP-204ENST00000466100 RAB2AP61019 212 aa8.44□□□□□ -1.06
VCP-204ENST00000466100 MORN5Q5VZ52 161 aa8.44□□□□□ -1.06
VCP-204ENST00000466100 Q6ZRG5 221 aa8.44□□□□□ -1.06
VCP-204ENST00000466100 OR1L4Q8NGR5 311 aa8.44□□□□□ -1.06
VCP-204ENST00000466100 GATAD1Q8WUU5 269 aa8.44□□□□□ -1.06
VCP-204ENST00000466100 MARC2Q969Z3 335 aa8.44□□□□□ -1.06
VCP-204ENST00000466100 UHRF2Q96PU4 802 aa8.44□□□□□ -1.06
VCP-204ENST00000466100 METTL26Q96S19 204 aa8.44□□□□□ -1.06
VCP-204ENST00000466100 PFDN5Q99471 154 aa8.44□□□□□ -1.06
VCP-204ENST00000466100 SHANK2-AS3Q9BTD1 123 aa8.44□□□□□ -1.06
VCP-204ENST00000466100 SLC25A39Q9BZJ4 359 aaPredicted RBP8.44□□□□□ -1.06
VCP-204ENST00000466100 DNAJC4Q9NNZ3 241 aa8.44□□□□□ -1.06
VCP-204ENST00000466100 HIGD1AQ9Y241 93 aa8.44□□□□□ -1.06
VCP-204ENST00000466100 ZNF98A6NK75 572 aa8.43□□□□□ -1.06
VCP-204ENST00000466100 CHEK1O14757 476 aa8.43□□□□□ -1.06
VCP-204ENST00000466100 M6PRP20645 277 aa8.43□□□□□ -1.06
VCP-204ENST00000466100 PRR31Q5SQ13 230 aa8.43□□□□□ -1.06
VCP-204ENST00000466100 C10orf113Q5VZT2 155 aa8.43□□□□□ -1.06
VCP-204ENST00000466100 SPATA31B1PQ5VZV4 182 aa8.43□□□□□ -1.06
VCP-204ENST00000466100 C16orf54Q6UWD8 224 aa8.43□□□□□ -1.06
VCP-204ENST00000466100 RPP25LQ8N5L8 163 aaKnown RBP8.43□□□□□ -1.06
VCP-204ENST00000466100 TMED6Q8WW62 240 aa8.43□□□□□ -1.06
VCP-204ENST00000466100 GLMPQ8WWB7 406 aa8.43□□□□□ -1.06
VCP-204ENST00000466100 SCRT1Q9BWW7 348 aa8.43□□□□□ -1.06
VCP-204ENST00000466100 SEPSECSQ9HD40 501 aaKnown RBP8.43□□□□□ -1.06
VCP-204ENST00000466100 RPRMQ9NS64 109 aa8.43□□□□□ -1.06
VCP-204ENST00000466100 TECRQ9NZ01 308 aaKnown RBP8.43□□□□□ -1.06
VCP-204ENST00000466100 MLXQ9UH92 298 aa8.43□□□□□ -1.06
VCP-204ENST00000466100 IGHV3OR16-13A0A075B7E8 117 aa8.42□□□□□ -1.06
VCP-204ENST00000466100 IGHV3-74A0A0B4J1X5 117 aa8.42□□□□□ -1.06
VCP-204ENST00000466100 SEC14L6B5MCN3 397 aa8.42□□□□□ -1.06
VCP-204ENST00000466100 WIPF1O43516 503 aa8.42□□□□□ -1.06
VCP-204ENST00000466100 MBP02144 154 aa8.42□□□□□ -1.06
VCP-204ENST00000466100 ACOT6Q3I5F7 207 aaPredicted RBP8.42□□□□□ -1.06
VCP-204ENST00000466100 TMEM41BQ5BJD5 291 aa8.42□□□□□ -1.06
VCP-204ENST00000466100 C1orf194Q5T5A4 169 aa8.42□□□□□ -1.06
VCP-204ENST00000466100 LINC00305Q7Z4B0 112 aa8.42□□□□□ -1.06
VCP-204ENST00000466100 PHYHIPLQ96FC7 376 aa8.42□□□□□ -1.06
VCP-204ENST00000466100 FAM167A-AS1Q96KT0 104 aa8.42□□□□□ -1.06
VCP-204ENST00000466100 ELOVL1Q9BW60 279 aa8.42□□□□□ -1.06
VCP-204ENST00000466100 RHPN1-AS1Q9BWJ2 59 aa8.42□□□□□ -1.06
VCP-204ENST00000466100 MRPL32Q9BYC8 188 aaKnown RBP8.42□□□□□ -1.06
VCP-204ENST00000466100 IGHV3-66A0A0C4DH42 116 aa8.41□□□□□ -1.06
VCP-204ENST00000466100 MRPS12O15235 138 aaKnown RBP8.41□□□□□ -1.06
VCP-204ENST00000466100 IGLV1-51P01701 117 aa8.41□□□□□ -1.06
VCP-204ENST00000466100 CD33P20138 364 aa8.41□□□□□ -1.06
VCP-204ENST00000466100 ZNF726P1Q15940 193 aa8.41□□□□□ -1.06
VCP-204ENST00000466100 FAM78BQ5VT40 261 aa8.41□□□□□ -1.06
VCP-204ENST00000466100 FAM90A2PQ658T7 463 aa8.41□□□□□ -1.06
VCP-204ENST00000466100 LEMD1Q68G75 181 aa8.41□□□□□ -1.06
VCP-204ENST00000466100 MIR17HGQ75NE6 70 aa8.41□□□□□ -1.06
VCP-204ENST00000466100 SSX7Q7RTT5 188 aa8.41□□□□□ -1.06
VCP-204ENST00000466100 OR10G4Q8NGN3 311 aa8.41□□□□□ -1.06
VCP-204ENST00000466100 OR10G9Q8NGN4 311 aa8.41□□□□□ -1.06
VCP-204ENST00000466100 OR10G7Q8NGN6 311 aa8.41□□□□□ -1.06
VCP-204ENST00000466100 C17orf77Q96MU5 243 aa8.41□□□□□ -1.06
VCP-204ENST00000466100 RNF2Q99496 336 aa8.41□□□□□ -1.06
VCP-204ENST00000466100 FUT9Q9Y231 359 aa8.41□□□□□ -1.06
VCP-204ENST00000466100 TRAV5A0A0B4J249 113 aa8.4□□□□□ -1.06
VCP-204ENST00000466100 A0A1W2PS18 150 aa8.4□□□□□ -1.06
VCP-204ENST00000466100 UMAD1C9J7I0 102 aa8.4□□□□□ -1.06
VCP-204ENST00000466100 SAP30O75446 220 aa8.4□□□□□ -1.06
VCP-204ENST00000466100 EIF3GO75821 320 aaKnown RBP eCLIP8.4□□□□□ -1.06
VCP-204ENST00000466100 GP9P14770 177 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms