RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 DNASE2O00115 360 aaPredicted RBP11.45□□□□□ -0.58
RAB11FIP3-208ENST00000464263 AP2S1P53680 142 aaPredicted RBP11.45□□□□□ -0.58
RAB11FIP3-208ENST00000464263 CMC4P56277 68 aaPredicted RBP11.45□□□□□ -0.58
RAB11FIP3-208ENST00000464263 PLP1P60201 277 aa11.45□□□□□ -0.58
RAB11FIP3-208ENST00000464263 SELENOTP62341 195 aa11.45□□□□□ -0.58
RAB11FIP3-208ENST00000464263 SLC25A31Q9H0C2 315 aa11.45□□□□□ -0.58
RAB11FIP3-208ENST00000464263 MED28Q9H204 178 aa11.45□□□□□ -0.58
RAB11FIP3-208ENST00000464263 PFDN2Q9UHV9 154 aa11.45□□□□□ -0.58
RAB11FIP3-208ENST00000464263 SLC45A2Q9UMX9 530 aa11.45□□□□□ -0.58
RAB11FIP3-208ENST00000464263 AGPAT2O15120 278 aa11.44□□□□□ -0.58
RAB11FIP3-208ENST00000464263 ORM2P19652 201 aa11.44□□□□□ -0.58
RAB11FIP3-208ENST00000464263 NUP62P37198 522 aaPredicted RBP11.44□□□□□ -0.58
RAB11FIP3-208ENST00000464263 HBG1P69891 147 aa11.44□□□□□ -0.58
RAB11FIP3-208ENST00000464263 HBG2P69892 147 aa11.44□□□□□ -0.58
RAB11FIP3-208ENST00000464263 EWSR1Q01844 656 aaKnown RBP eCLIP11.44□□□□□ -0.58
RAB11FIP3-208ENST00000464263 HAGHQ16775 308 aa11.44□□□□□ -0.58
RAB11FIP3-208ENST00000464263 ATP6V1FQ16864 119 aa11.44□□□□□ -0.58
RAB11FIP3-208ENST00000464263 C1orf194Q5T5A4 169 aa11.44□□□□□ -0.58
RAB11FIP3-208ENST00000464263 STX12Q86Y82 276 aa11.44□□□□□ -0.58
RAB11FIP3-208ENST00000464263 DCANP1Q8TF63 244 aa11.44□□□□□ -0.58
RAB11FIP3-208ENST00000464263 MGST2Q99735 147 aa11.44□□□□□ -0.58
RAB11FIP3-208ENST00000464263 UQCC1Q9NVA1 299 aa11.44□□□□□ -0.58
RAB11FIP3-208ENST00000464263 WDR83OSQ9Y284 106 aa11.44□□□□□ -0.58
RAB11FIP3-208ENST00000464263 SIGLEC15Q6ZMC9 328 aa11.43□□□□□ -0.58
RAB11FIP3-208ENST00000464263 FAM24BQ8N5W8 94 aa11.43□□□□□ -0.58
RAB11FIP3-208ENST00000464263 STXBP6Q8NFX7 210 aa11.43□□□□□ -0.58
RAB11FIP3-208ENST00000464263 OR1B1Q8NGR6 318 aa11.43□□□□□ -0.58
RAB11FIP3-208ENST00000464263 TMEM147Q9BVK8 224 aa11.43□□□□□ -0.58
RAB11FIP3-208ENST00000464263 MAP6D1Q9H9H5 199 aa11.43□□□□□ -0.58
RAB11FIP3-208ENST00000464263 HUWE1Q7Z6Z7 4374 aaKnown RBP11.43□□□□□ -0.58
RAB11FIP3-208ENST00000464263 HYPMO75409 117 aa11.42□□□□□ -0.58
RAB11FIP3-208ENST00000464263 LINC00869P0C866 280 aa11.42□□□□□ -0.58
RAB11FIP3-208ENST00000464263 LYL1P12980 280 aa11.42□□□□□ -0.58
RAB11FIP3-208ENST00000464263 ZNF124Q15973 351 aa11.42□□□□□ -0.58
RAB11FIP3-208ENST00000464263 PATE2Q6UY27 113 aa11.42□□□□□ -0.58
RAB11FIP3-208ENST00000464263 ZNF546Q86UE3 836 aa11.42□□□□□ -0.58
RAB11FIP3-208ENST00000464263 APRG1Q8IVJ8 170 aa11.42□□□□□ -0.58
RAB11FIP3-208ENST00000464263 TM2D3Q9BRN9 247 aa11.42□□□□□ -0.58
RAB11FIP3-208ENST00000464263 ZNF98A6NK75 572 aa11.41□□□□□ -0.58
RAB11FIP3-208ENST00000464263 PET100P0DJ07 73 aa11.41□□□□□ -0.58
RAB11FIP3-208ENST00000464263 BAXQ07812 192 aa11.41□□□□□ -0.58
RAB11FIP3-208ENST00000464263 RAB31Q13636 194 aa11.41□□□□□ -0.58
RAB11FIP3-208ENST00000464263 OR5C1Q8NGR4 320 aa11.41□□□□□ -0.58
RAB11FIP3-208ENST00000464263 CHAC2Q8WUX2 184 aa11.41□□□□□ -0.58
RAB11FIP3-208ENST00000464263 PPP1R14BQ96C90 147 aa11.41□□□□□ -0.58
RAB11FIP3-208ENST00000464263 ARL6Q9H0F7 186 aa11.41□□□□□ -0.58
RAB11FIP3-208ENST00000464263 NRN1Q9NPD7 142 aa11.41□□□□□ -0.58
RAB11FIP3-208ENST00000464263 DOK5Q9P104 306 aa11.41□□□□□ -0.58
RAB11FIP3-208ENST00000464263 MBD2Q9UBB5 411 aa11.41□□□□□ -0.58
RAB11FIP3-208ENST00000464263 FBXL17Q9UF56 701 aa11.41□□□□□ -0.58
RAB11FIP3-208ENST00000464263 LOC102724200A0A096LPH7 203 aaPredicted RBP11.4□□□□□ -0.58
RAB11FIP3-208ENST00000464263 UBE2L5PA0A1B0GUS4 154 aa11.4□□□□□ -0.58
RAB11FIP3-208ENST00000464263 H3BRN7 92 aa11.4□□□□□ -0.58
RAB11FIP3-208ENST00000464263 CAMLGP49069 296 aa11.4□□□□□ -0.58
RAB11FIP3-208ENST00000464263 DEFB131AP59861 70 aa11.4□□□□□ -0.58
RAB11FIP3-208ENST00000464263 PRR20EP86478 221 aa11.4□□□□□ -0.58
RAB11FIP3-208ENST00000464263 PRR20CP86479 221 aa11.4□□□□□ -0.58
RAB11FIP3-208ENST00000464263 PRR20DP86480 221 aa11.4□□□□□ -0.58
RAB11FIP3-208ENST00000464263 PRR20BP86481 221 aa11.4□□□□□ -0.58
RAB11FIP3-208ENST00000464263 PRR20AP86496 221 aa11.4□□□□□ -0.58
RAB11FIP3-208ENST00000464263 PXDC1Q5TGL8 231 aa11.4□□□□□ -0.58
RAB11FIP3-208ENST00000464263 OR8I2Q8N0Y5 310 aa11.4□□□□□ -0.58
RAB11FIP3-208ENST00000464263 GGTLC1Q9BX51 225 aa11.4□□□□□ -0.58
RAB11FIP3-208ENST00000464263 SLC25A39Q9BZJ4 359 aaPredicted RBP11.4□□□□□ -0.58
RAB11FIP3-208ENST00000464263 HIGD1AQ9Y241 93 aa11.4□□□□□ -0.58
RAB11FIP3-208ENST00000464263 AGRNO00468 2067 aa11.4□□□□□ -0.58
RAB11FIP3-208ENST00000464263 GIPP09681 153 aaPredicted RBP11.39□□□□□ -0.59
RAB11FIP3-208ENST00000464263 OR5G3P0C626 314 aa11.39□□□□□ -0.59
RAB11FIP3-208ENST00000464263 RPL12P30050 165 aaKnown RBP11.39□□□□□ -0.59
RAB11FIP3-208ENST00000464263 S100A7P31151 101 aa11.39□□□□□ -0.59
RAB11FIP3-208ENST00000464263 RAP2BP61225 183 aa11.39□□□□□ -0.59
RAB11FIP3-208ENST00000464263 C17orf77Q96MU5 243 aa11.39□□□□□ -0.59
RAB11FIP3-208ENST00000464263 SHANK2-AS3Q9BTD1 123 aa11.39□□□□□ -0.59
RAB11FIP3-208ENST00000464263 SCRT1Q9BWW7 348 aa11.39□□□□□ -0.59
RAB11FIP3-208ENST00000464263 SLC25A32Q9H2D1 315 aa11.39□□□□□ -0.59
RAB11FIP3-208ENST00000464263 SEPSECSQ9HD40 501 aaKnown RBP11.39□□□□□ -0.59
RAB11FIP3-208ENST00000464263 HSPB11Q9Y547 144 aa11.39□□□□□ -0.59
RAB11FIP3-208ENST00000464263 U3KQK5 164 aa11.39□□□□□ -0.59
RAB11FIP3-208ENST00000464263 MPDU1O75352 247 aa11.38□□□□□ -0.59
RAB11FIP3-208ENST00000464263 ZNF688P0C7X2 276 aa11.38□□□□□ -0.59
RAB11FIP3-208ENST00000464263 FGF7P21781 194 aa11.38□□□□□ -0.59
RAB11FIP3-208ENST00000464263 RPL29P47914 159 aaKnown RBP11.38□□□□□ -0.59
RAB11FIP3-208ENST00000464263 CLINT1Q14677 625 aa11.38□□□□□ -0.59
RAB11FIP3-208ENST00000464263 OPCMLQ14982 345 aa11.38□□□□□ -0.59
RAB11FIP3-208ENST00000464263 Q5BKY6 102 aa11.38□□□□□ -0.59
RAB11FIP3-208ENST00000464263 MIC13Q5XKP0 118 aa11.38□□□□□ -0.59
RAB11FIP3-208ENST00000464263 LEMD1Q68G75 181 aa11.38□□□□□ -0.59
RAB11FIP3-208ENST00000464263 THAP6Q8TBB0 222 aa11.38□□□□□ -0.59
RAB11FIP3-208ENST00000464263 ASB13Q8WXK3 278 aa11.38□□□□□ -0.59
RAB11FIP3-208ENST00000464263 TMEM37Q8WXS4 190 aa11.38□□□□□ -0.59
RAB11FIP3-208ENST00000464263 UHRF2Q96PU4 802 aa11.38□□□□□ -0.59
RAB11FIP3-208ENST00000464263 ARV1Q9H2C2 271 aa11.38□□□□□ -0.59
RAB11FIP3-208ENST00000464263 ZMAT4Q9H898 229 aa11.38□□□□□ -0.59
RAB11FIP3-208ENST00000464263 SLC25A22Q9H936 323 aa11.38□□□□□ -0.59
RAB11FIP3-208ENST00000464263 ELOA3CA0A087WX78 387 aaPredicted RBP11.37□□□□□ -0.59
RAB11FIP3-208ENST00000464263 SOCS3O14543 225 aa11.37□□□□□ -0.59
RAB11FIP3-208ENST00000464263 GPR82Q96P67 336 aa11.37□□□□□ -0.59
RAB11FIP3-208ENST00000464263 DNAJC4Q9NNZ3 241 aa11.37□□□□□ -0.59
RAB11FIP3-208ENST00000464263 RPL35AP18077 110 aaKnown RBP11.36□□□□□ -0.59
RAB11FIP3-208ENST00000464263 GALR1P47211 349 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms