RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 TEPPQ6URK8 271 aa13.08□□□□□ -0.32
VPS52-214ENST00000463486 BPIFCQ8NFQ6 507 aa13.08□□□□□ -0.32
VPS52-214ENST00000463486 SLC45A2Q9UMX9 530 aa13.08□□□□□ -0.32
VPS52-214ENST00000463486 AP2S1P53680 142 aaPredicted RBP13.07□□□□□ -0.32
VPS52-214ENST00000463486 CMC4P56277 68 aaPredicted RBP13.07□□□□□ -0.32
VPS52-214ENST00000463486 C1orf194Q5T5A4 169 aa13.07□□□□□ -0.32
VPS52-214ENST00000463486 SIGLEC15Q6ZMC9 328 aa13.07□□□□□ -0.32
VPS52-214ENST00000463486 TMEM217Q8N7C4 229 aa13.07□□□□□ -0.32
VPS52-214ENST00000463486 STXBP6Q8NFX7 210 aa13.07□□□□□ -0.32
VPS52-214ENST00000463486 PPP1R1CQ8WVI7 109 aa13.07□□□□□ -0.32
VPS52-214ENST00000463486 RCHY1Q96PM5 261 aa13.07□□□□□ -0.32
VPS52-214ENST00000463486 MGST2Q99735 147 aa13.07□□□□□ -0.32
VPS52-214ENST00000463486 MGAT4CQ9UBM8 478 aa13.07□□□□□ -0.32
VPS52-214ENST00000463486 LOC102724200A0A096LPH7 203 aaPredicted RBP13.06□□□□□ -0.32
VPS52-214ENST00000463486 DNASE2O00115 360 aaPredicted RBP13.06□□□□□ -0.32
VPS52-214ENST00000463486 SELENOTP62341 195 aa13.06□□□□□ -0.32
VPS52-214ENST00000463486 PATE2Q6UY27 113 aa13.06□□□□□ -0.32
VPS52-214ENST00000463486 GGTLC1Q9BX51 225 aa13.06□□□□□ -0.32
VPS52-214ENST00000463486 WDR83OSQ9Y284 106 aa13.06□□□□□ -0.32
VPS52-214ENST00000463486 ZNF98A6NK75 572 aa13.05□□□□□ -0.32
VPS52-214ENST00000463486 E5RGE8 158 aa13.05□□□□□ -0.32
VPS52-214ENST00000463486 AGPAT2O15120 278 aa13.05□□□□□ -0.32
VPS52-214ENST00000463486 MPC2O95563 127 aa13.05□□□□□ -0.32
VPS52-214ENST00000463486 LINC00869P0C866 280 aa13.05□□□□□ -0.32
VPS52-214ENST00000463486 ORM2P19652 201 aa13.05□□□□□ -0.32
VPS52-214ENST00000463486 S100A11P31949 105 aa13.05□□□□□ -0.32
VPS52-214ENST00000463486 NUP62P37198 522 aaPredicted RBP13.05□□□□□ -0.32
VPS52-214ENST00000463486 DEFB131AP59861 70 aa13.05□□□□□ -0.32
VPS52-214ENST00000463486 NHLH2Q02577 135 aa13.05□□□□□ -0.32
VPS52-214ENST00000463486 OXA1LQ15070 435 aa13.05□□□□□ -0.32
VPS52-214ENST00000463486 LRRC37A5PQ49AS3 106 aa13.05□□□□□ -0.32
VPS52-214ENST00000463486 SPATA25Q9BR10 227 aa13.05□□□□□ -0.32
VPS52-214ENST00000463486 NRN1Q9NPD7 142 aa13.05□□□□□ -0.32
VPS52-214ENST00000463486 SOCS3O14543 225 aa13.04□□□□□ -0.32
VPS52-214ENST00000463486 EWSR1Q01844 656 aaKnown RBP eCLIP13.04□□□□□ -0.32
VPS52-214ENST00000463486 OR1B1Q8NGR6 318 aa13.04□□□□□ -0.32
VPS52-214ENST00000463486 ZMAT4Q9H898 229 aa13.04□□□□□ -0.32
VPS52-214ENST00000463486 RETNQ9HD89 108 aa13.04□□□□□ -0.32
VPS52-214ENST00000463486 UQCC1Q9NVA1 299 aa13.04□□□□□ -0.32
VPS52-214ENST00000463486 PFDN2Q9UHV9 154 aa13.04□□□□□ -0.32
VPS52-214ENST00000463486 RLN2P04090 185 aa13.03□□□□□ -0.32
VPS52-214ENST00000463486 FCN2Q15485 313 aa13.03□□□□□ -0.32
VPS52-214ENST00000463486 RGS21Q2M5E4 152 aa13.03□□□□□ -0.32
VPS52-214ENST00000463486 LEMD1Q68G75 181 aa13.03□□□□□ -0.32
VPS52-214ENST00000463486 STX12Q86Y82 276 aa13.03□□□□□ -0.32
VPS52-214ENST00000463486 OR11H7Q8NGC8 314 aa13.03□□□□□ -0.32
VPS52-214ENST00000463486 CHAC2Q8WUX2 184 aa13.03□□□□□ -0.32
VPS52-214ENST00000463486 SHANK2-AS3Q9BTD1 123 aa13.03□□□□□ -0.32
VPS52-214ENST00000463486 SLC25A39Q9BZJ4 359 aaPredicted RBP13.03□□□□□ -0.32
VPS52-214ENST00000463486 SLC25A32Q9H2D1 315 aa13.03□□□□□ -0.32
VPS52-214ENST00000463486 SEPSECSQ9HD40 501 aaKnown RBP13.03□□□□□ -0.32
VPS52-214ENST00000463486 DOK5Q9P104 306 aa13.03□□□□□ -0.32
VPS52-214ENST00000463486 FBXL17Q9UF56 701 aa13.03□□□□□ -0.32
VPS52-214ENST00000463486 CSMD3Q7Z407 3707 aa13.03□□□□□ -0.32
VPS52-214ENST00000463486 AGRNO00468 2067 aa13.02□□□□□ -0.33
VPS52-214ENST00000463486 KIR2DL5BA0A0G2JN68 375 aa13.02□□□□□ -0.33
VPS52-214ENST00000463486 KIR2DL5BA0A0G2JPC4 375 aa13.02□□□□□ -0.33
VPS52-214ENST00000463486 H3BRN7 92 aa13.02□□□□□ -0.33
VPS52-214ENST00000463486 HYPMO75409 117 aa13.02□□□□□ -0.33
VPS52-214ENST00000463486 ZNF688P0C7X2 276 aa13.02□□□□□ -0.33
VPS52-214ENST00000463486 LYL1P12980 280 aa13.02□□□□□ -0.33
VPS52-214ENST00000463486 PRR20EP86478 221 aa13.02□□□□□ -0.33
VPS52-214ENST00000463486 PRR20CP86479 221 aa13.02□□□□□ -0.33
VPS52-214ENST00000463486 PRR20DP86480 221 aa13.02□□□□□ -0.33
VPS52-214ENST00000463486 PRR20BP86481 221 aa13.02□□□□□ -0.33
VPS52-214ENST00000463486 PRR20AP86496 221 aa13.02□□□□□ -0.33
VPS52-214ENST00000463486 ATP6V1FQ16864 119 aa13.02□□□□□ -0.33
VPS52-214ENST00000463486 ZNF546Q86UE3 836 aa13.02□□□□□ -0.33
VPS52-214ENST00000463486 OR8I2Q8N0Y5 310 aa13.02□□□□□ -0.33
VPS52-214ENST00000463486 KIR2DL5AQ8N109 375 aa13.02□□□□□ -0.33
VPS52-214ENST00000463486 KIR2DL5BQ8NHK3 375 aa13.02□□□□□ -0.33
VPS52-214ENST00000463486 TMEM147Q9BVK8 224 aa13.02□□□□□ -0.33
VPS52-214ENST00000463486 SCRT1Q9BWW7 348 aa13.02□□□□□ -0.33
VPS52-214ENST00000463486 RPL35AP18077 110 aaKnown RBP13.01□□□□□ -0.33
VPS52-214ENST00000463486 CAMLGP49069 296 aa13.01□□□□□ -0.33
VPS52-214ENST00000463486 HBG1P69891 147 aa13.01□□□□□ -0.33
VPS52-214ENST00000463486 HBG2P69892 147 aa13.01□□□□□ -0.33
VPS52-214ENST00000463486 TMEM37Q8WXS4 190 aa13.01□□□□□ -0.33
VPS52-214ENST00000463486 WWC2-AS2Q96NR7 200 aa13.01□□□□□ -0.33
VPS52-214ENST00000463486 UHRF2Q96PU4 802 aa13.01□□□□□ -0.33
VPS52-214ENST00000463486 OVOL2Q9BRP0 275 aa13.01□□□□□ -0.33
VPS52-214ENST00000463486 ARL6Q9H0F7 186 aa13.01□□□□□ -0.33
VPS52-214ENST00000463486 EDA2RQ9HAV5 297 aa13.01□□□□□ -0.33
VPS52-214ENST00000463486 HIGD1AQ9Y241 93 aa13.01□□□□□ -0.33
VPS52-214ENST00000463486 PXDC1Q5TGL8 231 aa13□□□□□ -0.33
VPS52-214ENST00000463486 OR5C1Q8NGR4 320 aa13□□□□□ -0.33
VPS52-214ENST00000463486 PPP1R14BQ96C90 147 aa13□□□□□ -0.33
VPS52-214ENST00000463486 SLC25A31Q9H0C2 315 aa13□□□□□ -0.33
VPS52-214ENST00000463486 UBE2L5PA0A1B0GUS4 154 aa12.99□□□□□ -0.33
VPS52-214ENST00000463486 MRPS12O15235 138 aaKnown RBP12.99□□□□□ -0.33
VPS52-214ENST00000463486 GIG44P09565 113 aaPredicted RBP12.99□□□□□ -0.33
VPS52-214ENST00000463486 OR5G3P0C626 314 aa12.99□□□□□ -0.33
VPS52-214ENST00000463486 RPL29P47914 159 aaKnown RBP12.99□□□□□ -0.33
VPS52-214ENST00000463486 BAXQ07812 192 aa12.99□□□□□ -0.33
VPS52-214ENST00000463486 OPCMLQ14982 345 aa12.99□□□□□ -0.33
VPS52-214ENST00000463486 PSMG4Q5JS54 123 aa12.99□□□□□ -0.33
VPS52-214ENST00000463486 MIC13Q5XKP0 118 aa12.99□□□□□ -0.33
VPS52-214ENST00000463486 Q6ZWC4 215 aa12.99□□□□□ -0.33
VPS52-214ENST00000463486 MED28Q9H204 178 aa12.99□□□□□ -0.33
VPS52-214ENST00000463486 ARV1Q9H2C2 271 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms