RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 NHLH2Q02577 135 aa13.18□□□□□ -0.3
SF1-212ENST00000463343 WFDC3Q8IUB2 231 aa13.18□□□□□ -0.3
SF1-212ENST00000463343 UBQLN2Q9UHD9 624 aa13.18□□□□□ -0.3
SF1-212ENST00000463343 DNASE2O00115 360 aaPredicted RBP13.17□□□□□ -0.3
SF1-212ENST00000463343 LYL1P12980 280 aa13.17□□□□□ -0.3
SF1-212ENST00000463343 SELENOTP62341 195 aa13.17□□□□□ -0.3
SF1-212ENST00000463343 PAFAH1B2P68402 229 aa13.17□□□□□ -0.3
SF1-212ENST00000463343 VWC2Q2TAL6 325 aa13.17□□□□□ -0.3
SF1-212ENST00000463343 ODF3L2Q3SX64 289 aa13.17□□□□□ -0.3
SF1-212ENST00000463343 LINC00322Q6ZN03 302 aaPredicted RBP13.17□□□□□ -0.3
SF1-212ENST00000463343 STX12Q86Y82 276 aa13.17□□□□□ -0.3
SF1-212ENST00000463343 CITED4Q96RK1 184 aa13.17□□□□□ -0.3
SF1-212ENST00000463343 SLC25A31Q9H0C2 315 aa13.17□□□□□ -0.3
SF1-212ENST00000463343 SLC45A2Q9UMX9 530 aa13.17□□□□□ -0.3
SF1-212ENST00000463343 RYR2Q92736 4967 aa13.16□□□□□ -0.3
SF1-212ENST00000463343 RBMY1BA6NDE4 496 aaKnown RBP13.16□□□□□ -0.3
SF1-212ENST00000463343 RBMY1EA6NEQ0 496 aaKnown RBP13.16□□□□□ -0.3
SF1-212ENST00000463343 AGPAT2O15120 278 aa13.16□□□□□ -0.3
SF1-212ENST00000463343 RBMY1DP0C7P1 496 aaKnown RBP13.16□□□□□ -0.3
SF1-212ENST00000463343 ORM2P19652 201 aa13.16□□□□□ -0.3
SF1-212ENST00000463343 EWSR1Q01844 656 aaKnown RBP eCLIP13.16□□□□□ -0.3
SF1-212ENST00000463343 ATP6V1FQ16864 119 aa13.16□□□□□ -0.3
SF1-212ENST00000463343 MGST2Q99735 147 aa13.16□□□□□ -0.3
SF1-212ENST00000463343 ZMAT4Q9H898 229 aa13.16□□□□□ -0.3
SF1-212ENST00000463343 SRD5A3Q9H8P0 318 aa13.16□□□□□ -0.3
SF1-212ENST00000463343 UQCC1Q9NVA1 299 aa13.16□□□□□ -0.3
SF1-212ENST00000463343 PFDN2Q9UHV9 154 aa13.16□□□□□ -0.3
SF1-212ENST00000463343 SACSQ9NZJ4 4579 aa13.15□□□□□ -0.3
SF1-212ENST00000463343 TRAV2A0A0B4J234 112 aa13.15□□□□□ -0.3
SF1-212ENST00000463343 HELTA6NFD8 242 aa13.15□□□□□ -0.3
SF1-212ENST00000463343 AP2S1P53680 142 aaPredicted RBP13.15□□□□□ -0.3
SF1-212ENST00000463343 PLP1P60201 277 aa13.15□□□□□ -0.3
SF1-212ENST00000463343 HBG1P69891 147 aa13.15□□□□□ -0.3
SF1-212ENST00000463343 HBG2P69892 147 aa13.15□□□□□ -0.3
SF1-212ENST00000463343 STXBP6Q8NFX7 210 aa13.15□□□□□ -0.3
SF1-212ENST00000463343 FAM110AQ9BQ89 295 aa13.15□□□□□ -0.3
SF1-212ENST00000463343 TMEM147Q9BVK8 224 aa13.15□□□□□ -0.3
SF1-212ENST00000463343 WDR83OSQ9Y284 106 aa13.15□□□□□ -0.3
SF1-212ENST00000463343 LCE6AA0A183 80 aa13.14□□□□□ -0.31
SF1-212ENST00000463343 K7EQG2 157 aa13.14□□□□□ -0.31
SF1-212ENST00000463343 LINC00869P0C866 280 aa13.14□□□□□ -0.31
SF1-212ENST00000463343 NUP62P37198 522 aaPredicted RBP13.14□□□□□ -0.31
SF1-212ENST00000463343 CMC4P56277 68 aaPredicted RBP13.14□□□□□ -0.31
SF1-212ENST00000463343 HAGHQ16775 308 aa13.14□□□□□ -0.31
SF1-212ENST00000463343 C1orf194Q5T5A4 169 aa13.14□□□□□ -0.31
SF1-212ENST00000463343 PATE2Q6UY27 113 aa13.14□□□□□ -0.31
SF1-212ENST00000463343 SIGLEC15Q6ZMC9 328 aa13.14□□□□□ -0.31
SF1-212ENST00000463343 FAM24BQ8N5W8 94 aa13.14□□□□□ -0.31
SF1-212ENST00000463343 OR1B1Q8NGR6 318 aa13.14□□□□□ -0.31
SF1-212ENST00000463343 PPP1R14BQ96C90 147 aa13.14□□□□□ -0.31
SF1-212ENST00000463343 DOK5Q9P104 306 aa13.14□□□□□ -0.31
SF1-212ENST00000463343 MBD2Q9UBB5 411 aa13.14□□□□□ -0.31
SF1-212ENST00000463343 HYPMO75409 117 aa13.13□□□□□ -0.31
SF1-212ENST00000463343 PET100P0DJ07 73 aa13.13□□□□□ -0.31
SF1-212ENST00000463343 CAMLGP49069 296 aa13.13□□□□□ -0.31
SF1-212ENST00000463343 OR5C1Q8NGR4 320 aa13.13□□□□□ -0.31
SF1-212ENST00000463343 DCANP1Q8TF63 244 aa13.13□□□□□ -0.31
SF1-212ENST00000463343 MAP6D1Q9H9H5 199 aa13.13□□□□□ -0.31
SF1-212ENST00000463343 ZNF98A6NK75 572 aa13.12□□□□□ -0.31
SF1-212ENST00000463343 BAXQ07812 192 aa13.12□□□□□ -0.31
SF1-212ENST00000463343 ZNF124Q15973 351 aa13.12□□□□□ -0.31
SF1-212ENST00000463343 Q5BKY6 102 aa13.12□□□□□ -0.31
SF1-212ENST00000463343 ZNF546Q86UE3 836 aa13.12□□□□□ -0.31
SF1-212ENST00000463343 APRG1Q8IVJ8 170 aa13.12□□□□□ -0.31
SF1-212ENST00000463343 TM2D3Q9BRN9 247 aa13.12□□□□□ -0.31
SF1-212ENST00000463343 ARL6Q9H0F7 186 aa13.12□□□□□ -0.31
SF1-212ENST00000463343 HIGD1AQ9Y241 93 aa13.12□□□□□ -0.31
SF1-212ENST00000463343 UBE2L5PA0A1B0GUS4 154 aa13.11□□□□□ -0.31
SF1-212ENST00000463343 OR5G3P0C626 314 aa13.11□□□□□ -0.31
SF1-212ENST00000463343 RPL12P30050 165 aaKnown RBP13.11□□□□□ -0.31
SF1-212ENST00000463343 DEFB131AP59861 70 aa13.11□□□□□ -0.31
SF1-212ENST00000463343 RAB31Q13636 194 aa13.11□□□□□ -0.31
SF1-212ENST00000463343 OR8I2Q8N0Y5 310 aa13.11□□□□□ -0.31
SF1-212ENST00000463343 THAP6Q8TBB0 222 aa13.11□□□□□ -0.31
SF1-212ENST00000463343 CHAC2Q8WUX2 184 aa13.11□□□□□ -0.31
SF1-212ENST00000463343 GGTLC1Q9BX51 225 aa13.11□□□□□ -0.31
SF1-212ENST00000463343 SLC25A39Q9BZJ4 359 aaPredicted RBP13.11□□□□□ -0.31
SF1-212ENST00000463343 NRN1Q9NPD7 142 aa13.11□□□□□ -0.31
SF1-212ENST00000463343 FBXL17Q9UF56 701 aa13.11□□□□□ -0.31
SF1-212ENST00000463343 H3BRN7 92 aa13.1□□□□□ -0.31
SF1-212ENST00000463343 GIPP09681 153 aaPredicted RBP13.1□□□□□ -0.31
SF1-212ENST00000463343 FGF7P21781 194 aa13.1□□□□□ -0.31
SF1-212ENST00000463343 RAP2BP61225 183 aa13.1□□□□□ -0.31
SF1-212ENST00000463343 PRR20EP86478 221 aa13.1□□□□□ -0.31
SF1-212ENST00000463343 PRR20CP86479 221 aa13.1□□□□□ -0.31
SF1-212ENST00000463343 PRR20DP86480 221 aa13.1□□□□□ -0.31
SF1-212ENST00000463343 PRR20BP86481 221 aa13.1□□□□□ -0.31
SF1-212ENST00000463343 PRR20AP86496 221 aa13.1□□□□□ -0.31
SF1-212ENST00000463343 CLINT1Q14677 625 aa13.1□□□□□ -0.31
SF1-212ENST00000463343 PXDC1Q5TGL8 231 aa13.1□□□□□ -0.31
SF1-212ENST00000463343 MIC13Q5XKP0 118 aa13.1□□□□□ -0.31
SF1-212ENST00000463343 LEMD1Q68G75 181 aa13.1□□□□□ -0.31
SF1-212ENST00000463343 SHANK2-AS3Q9BTD1 123 aa13.1□□□□□ -0.31
SF1-212ENST00000463343 SCRT1Q9BWW7 348 aa13.1□□□□□ -0.31
SF1-212ENST00000463343 SLC25A32Q9H2D1 315 aa13.1□□□□□ -0.31
SF1-212ENST00000463343 SLC25A22Q9H936 323 aa13.1□□□□□ -0.31
SF1-212ENST00000463343 HSPB11Q9Y547 144 aa13.1□□□□□ -0.31
SF1-212ENST00000463343 LOC102724200A0A096LPH7 203 aaPredicted RBP13.09□□□□□ -0.31
SF1-212ENST00000463343 RPL29P47914 159 aaKnown RBP13.09□□□□□ -0.31
SF1-212ENST00000463343 OPCMLQ14982 345 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms