RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, human

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP98-208	ENST00000461047	OR51G1	Q8NGK1	321 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	TMEM170A	Q8WVE7	144 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	PPP1R14B	Q96C90	147 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	METTL26	Q96S19	204 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	C11orf1	Q9H5F2	150 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	TNFSF18	Q9UNG2	199 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	TRAV14DV4	A0A0A6YYC5	116 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	UBE2L5P	A0A1B0GUS4	154 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	PMS2P5	A8MQ11	134 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	PPP5D1	E7EU14	171 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	C1QB	P02746	253 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	IGLC1	P0CG04	106 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	FGF7	P21781	194 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	SYNJ2BP	P57105	145 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	DEFA5	Q01523	94 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	ZNF345	Q14585	488 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	VWC2	Q2TAL6	325 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	DEFB136	Q30KP8	78 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	TIGIT	Q495A1	244 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	C9orf66	Q5T8R8	295 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	LAMTOR1	Q6IAA8	161 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	EIF5AL1	Q6IS14	154 aa	Known RBP	4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	CYP2G1P	Q6ZSU1	146 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	OR9G4	Q8NGQ1	327 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	OR1L4	Q8NGR5	311 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	DYNLRB2	Q8TF09	96 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	ST6GAL2	Q96JF0	529 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	PFDN5	Q99471	154 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	ARPC5L	Q9BPX5	153 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	CHRDL1	Q9BU40	450 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	PBDC1	Q9BVG4	233 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	SMIM3	Q9BZL3	60 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	DAZ1	Q9NQZ3	744 aa	Known RBP	4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	MRPL27	Q9P0M9	148 aa	Known RBP	4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	FBXL17	Q9UF56	701 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	RABAC1	Q9UI14	185 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	CELSR1	Q9NYQ6	3014 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	AKAP9	Q99996	3911 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	C2CD3	Q4AC94	2353 aa		4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	SETD2	Q9BYW2	2564 aa	Predicted RBP	4.55	□□□□□ -1.68
NUP98-208	ENST00000461047	HELT	A6NFD8	242 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	PRSS46	E5RG02	174 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	SMLR1	H3BR10	107 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	AGPAT2	O15120	278 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	COX7A2P2	O60397	106 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	HYPM	O75409	117 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	SAP30	O75446	220 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	IGKV1-17	P01599	117 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	TRBV12-3	P01733	135 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	MB	P02144	154 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	IL4	P05112	153 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	OR5G3	P0C626	314 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	PSG1	P11464	419 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	ORM2	P19652	201 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	RPL29	P47914	159 aa	Known RBP	4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	LYZ	P61626	148 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	PAFAH1B2	P68402	229 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	ARL16	Q0P5N6	197 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	FHL3	Q13643	280 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047		Q5BKY6	102 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	TOMM20L	Q6UXN7	152 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	C18orf65	Q6ZTR6	163 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	KCNRG	Q8N5I3	272 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	WFDC9	Q8NEX5	89 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	TMEM190	Q8WZ59	177 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	DLX4	Q92988	240 aa	Predicted RBP	4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	GPR82	Q96P67	336 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	DUX3	Q96PT4	197 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	RNF2	Q99496	336 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	PARD6G	Q9BYG4	376 aa	Predicted RBP	4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	WDR61	Q9GZS3	305 aa	Known RBP	4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	DNAJC4	Q9NNZ3	241 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	TECR	Q9NZ01	308 aa	Known RBP	4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	SLC45A2	Q9UMX9	530 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	WDR83OS	Q9Y284	106 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	MXRA5	Q9NR99	2828 aa		4.54	□□□□□ -1.68
NUP98-208	ENST00000461047	NIPBL	Q6KC79	2804 aa	eCLIP	4.53	□□□□□ -1.68
NUP98-208	ENST00000461047	IGHV3-35	A0A0C4DH35	117 aa		4.53	□□□□□ -1.68
NUP98-208	ENST00000461047		A0A1B0GVG6	124 aa		4.53	□□□□□ -1.68
NUP98-208	ENST00000461047		A8MWP6	167 aa		4.53	□□□□□ -1.68
NUP98-208	ENST00000461047	SEC14L6	B5MCN3	397 aa		4.53	□□□□□ -1.68
NUP98-208	ENST00000461047	LINC00869	P0C866	280 aa		4.53	□□□□□ -1.68
NUP98-208	ENST00000461047	TPT1	P13693	172 aa	Known RBP	4.53	□□□□□ -1.68
NUP98-208	ENST00000461047	CBLN1	P23435	193 aa		4.53	□□□□□ -1.68
NUP98-208	ENST00000461047	CMC4	P56277	68 aa	Predicted RBP	4.53	□□□□□ -1.68
NUP98-208	ENST00000461047	SERF2	P84101	59 aa		4.53	□□□□□ -1.68
NUP98-208	ENST00000461047	ZNF90	Q03938	601 aa		4.53	□□□□□ -1.68
NUP98-208	ENST00000461047	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.53	□□□□□ -1.68
NUP98-208	ENST00000461047	C1orf194	Q5T5A4	169 aa		4.53	□□□□□ -1.68
NUP98-208	ENST00000461047	SAMD13	Q5VXD3	122 aa		4.53	□□□□□ -1.68
NUP98-208	ENST00000461047	C10orf113	Q5VZT2	155 aa		4.53	□□□□□ -1.68
NUP98-208	ENST00000461047	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.53	□□□□□ -1.68
NUP98-208	ENST00000461047	TMUB2	Q71RG4	321 aa		4.53	□□□□□ -1.68
NUP98-208	ENST00000461047	HAPLN4	Q86UW8	402 aa		4.53	□□□□□ -1.68
NUP98-208	ENST00000461047	OR1B1	Q8NGR6	318 aa		4.53	□□□□□ -1.68
NUP98-208	ENST00000461047	OR2K2	Q8NGT1	345 aa		4.53	□□□□□ -1.68
NUP98-208	ENST00000461047	GATAD1	Q8WUU5	269 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms