RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 S100A7AQ86SG5 101 aa16.9■□□□□ 0.3
C9orf3-209ENST00000460573 PRR25Q96S07 402 aa16.9■□□□□ 0.3
C9orf3-209ENST00000460573 MGST2Q99735 147 aa16.9■□□□□ 0.3
C9orf3-209ENST00000460573 SPAG8Q99932 426 aaPredicted RBP16.9■□□□□ 0.3
C9orf3-209ENST00000460573 LINC00869P0C866 280 aa16.89■□□□□ 0.29
C9orf3-209ENST00000460573 CLINT1Q14677 625 aa16.89■□□□□ 0.29
C9orf3-209ENST00000460573 AQP10Q96PS8 301 aa16.89■□□□□ 0.29
C9orf3-209ENST00000460573 ATP5SQ99766 215 aa16.89■□□□□ 0.29
C9orf3-209ENST00000460573 BUB3O43684 328 aa16.88■□□□□ 0.29
C9orf3-209ENST00000460573 PAFAH1B2P68402 229 aa16.88■□□□□ 0.29
C9orf3-209ENST00000460573 FAM90A2PQ658T7 463 aa16.88■□□□□ 0.29
C9orf3-209ENST00000460573 C16orf54Q6UWD8 224 aa16.88■□□□□ 0.29
C9orf3-209ENST00000460573 TCF24Q7RTU0 167 aa16.88■□□□□ 0.29
C9orf3-209ENST00000460573 GTSCR1Q86UQ5 136 aa16.88■□□□□ 0.29
C9orf3-209ENST00000460573 INO80EQ8NBZ0 244 aaPredicted RBP16.88■□□□□ 0.29
C9orf3-209ENST00000460573 IGHV3-66A0A0C4DH42 116 aa16.87■□□□□ 0.29
C9orf3-209ENST00000460573 HELTA6NFD8 242 aa16.87■□□□□ 0.29
C9orf3-209ENST00000460573 HYPMO75409 117 aa16.87■□□□□ 0.29
C9orf3-209ENST00000460573 ORM2P19652 201 aa16.87■□□□□ 0.29
C9orf3-209ENST00000460573 FGF7P21781 194 aa16.87■□□□□ 0.29
C9orf3-209ENST00000460573 RPL29P47914 159 aaKnown RBP16.87■□□□□ 0.29
C9orf3-209ENST00000460573 AP2S1P53680 142 aaPredicted RBP16.87■□□□□ 0.29
C9orf3-209ENST00000460573 C1orf194Q5T5A4 169 aa16.87■□□□□ 0.29
C9orf3-209ENST00000460573 OR1B1Q8NGR6 318 aa16.87■□□□□ 0.29
C9orf3-209ENST00000460573 SELENOKQ9Y6D0 94 aa16.87■□□□□ 0.29
C9orf3-209ENST00000460573 SORL1Q92673 2214 aa16.86■□□□□ 0.29
C9orf3-209ENST00000460573 FXYD6-FXYD2A0A087WZ82 144 aa16.86■□□□□ 0.29
C9orf3-209ENST00000460573 IFNA5P01569 189 aa16.86■□□□□ 0.29
C9orf3-209ENST00000460573 Q6ZRG5 221 aa16.86■□□□□ 0.29
C9orf3-209ENST00000460573 GLMPQ8WWB7 406 aa16.86■□□□□ 0.29
C9orf3-209ENST00000460573 GGTLC1Q9BX51 225 aa16.86■□□□□ 0.29
C9orf3-209ENST00000460573 FBXL17Q9UF56 701 aa16.86■□□□□ 0.29
C9orf3-209ENST00000460573 TNFSF18Q9UNG2 199 aa16.86■□□□□ 0.29
C9orf3-209ENST00000460573 OR4C46A6NHA9 309 aa16.85■□□□□ 0.29
C9orf3-209ENST00000460573 OPCMLQ14982 345 aa16.85■□□□□ 0.29
C9orf3-209ENST00000460573 NPCDR1Q9BY65 106 aa16.85■□□□□ 0.29
C9orf3-209ENST00000460573 PARD6GQ9BYG4 376 aaPredicted RBP16.85■□□□□ 0.29
C9orf3-209ENST00000460573 WDR61Q9GZS3 305 aaKnown RBP16.85■□□□□ 0.29
C9orf3-209ENST00000460573 ARL6Q9H0F7 186 aa16.85■□□□□ 0.29
C9orf3-209ENST00000460573 KCNIP2Q9NS61 270 aa16.85■□□□□ 0.29
C9orf3-209ENST00000460573 RNF24Q9Y225 148 aa16.85■□□□□ 0.29
C9orf3-209ENST00000460573 HIGD1AQ9Y241 93 aa16.85■□□□□ 0.29
C9orf3-209ENST00000460573 ELOA3CA0A087WX78 387 aaPredicted RBP16.84■□□□□ 0.29
C9orf3-209ENST00000460573 TRAV2A0A0B4J234 112 aa16.84■□□□□ 0.29
C9orf3-209ENST00000460573 G3V3Q6 166 aa16.84■□□□□ 0.29
C9orf3-209ENST00000460573 RPL11P62913 178 aaKnown RBP16.84■□□□□ 0.29
C9orf3-209ENST00000460573 PRR20EP86478 221 aa16.84■□□□□ 0.29
C9orf3-209ENST00000460573 PRR20CP86479 221 aa16.84■□□□□ 0.29
C9orf3-209ENST00000460573 PRR20DP86480 221 aa16.84■□□□□ 0.29
C9orf3-209ENST00000460573 PRR20BP86481 221 aa16.84■□□□□ 0.29
C9orf3-209ENST00000460573 PRR20AP86496 221 aa16.84■□□□□ 0.29
C9orf3-209ENST00000460573 STPG3Q8N7X2 389 aa16.84■□□□□ 0.29
C9orf3-209ENST00000460573 SMIM3Q9BZL3 60 aa16.84■□□□□ 0.29
C9orf3-209ENST00000460573 HMSDA8MTL9 139 aa16.83■□□□□ 0.28
C9orf3-209ENST00000460573 C17orf112F2Z3M2 114 aa16.83■□□□□ 0.28
C9orf3-209ENST00000460573 OR5G3P0C626 314 aa16.83■□□□□ 0.28
C9orf3-209ENST00000460573 B2MP61769 119 aa16.83■□□□□ 0.28
C9orf3-209ENST00000460573 MIC13Q5XKP0 118 aa16.83■□□□□ 0.28
C9orf3-209ENST00000460573 ZNF709Q8N972 641 aa16.83■□□□□ 0.28
C9orf3-209ENST00000460573 SCGB1C1Q8TD33 95 aa16.83■□□□□ 0.28
C9orf3-209ENST00000460573 B9D2Q9BPU9 175 aa16.83■□□□□ 0.28
C9orf3-209ENST00000460573 DOK5Q9P104 306 aa16.83■□□□□ 0.28
C9orf3-209ENST00000460573 ZNF98A6NK75 572 aa16.82■□□□□ 0.28
C9orf3-209ENST00000460573 DNASE2O00115 360 aaPredicted RBP16.82■□□□□ 0.28
C9orf3-209ENST00000460573 CMC4P56277 68 aaPredicted RBP16.82■□□□□ 0.28
C9orf3-209ENST00000460573 CD81P60033 236 aa16.82■□□□□ 0.28
C9orf3-209ENST00000460573 ZNF266Q14584 549 aa16.82■□□□□ 0.28
C9orf3-209ENST00000460573 SIGLEC15Q6ZMC9 328 aa16.82■□□□□ 0.28
C9orf3-209ENST00000460573 Q8N1Y9 231 aa16.82■□□□□ 0.28
C9orf3-209ENST00000460573 OR1L4Q8NGR5 311 aa16.82■□□□□ 0.28
C9orf3-209ENST00000460573 GPR82Q96P67 336 aa16.82■□□□□ 0.28
C9orf3-209ENST00000460573 SLC25A39Q9BZJ4 359 aaPredicted RBP16.82■□□□□ 0.28
C9orf3-209ENST00000460573 ARV1Q9H2C2 271 aa16.82■□□□□ 0.28
C9orf3-209ENST00000460573 SLC39A9Q9NUM3 307 aa16.82■□□□□ 0.28
C9orf3-209ENST00000460573 SMAD5-AS1Q9Y6J3 95 aa16.82■□□□□ 0.28
C9orf3-209ENST00000460573 DNAH3Q8TD57 4116 aa16.82■□□□□ 0.28
C9orf3-209ENST00000460573 COX7A2P2O60397 106 aa16.81■□□□□ 0.28
C9orf3-209ENST00000460573 OR8I2Q8N0Y5 310 aa16.81■□□□□ 0.28
C9orf3-209ENST00000460573 PFDN5Q99471 154 aa16.81■□□□□ 0.28
C9orf3-209ENST00000460573 FAM110AQ9BQ89 295 aa16.81■□□□□ 0.28
C9orf3-209ENST00000460573 SHANK2-AS3Q9BTD1 123 aa16.81■□□□□ 0.28
C9orf3-209ENST00000460573 MS4A6AQ9H2W1 248 aa16.81■□□□□ 0.28
C9orf3-209ENST00000460573 PXMP4Q9Y6I8 212 aa16.81■□□□□ 0.28
C9orf3-209ENST00000460573 IGKV3-7A0A075B6H7 116 aa16.8■□□□□ 0.28
C9orf3-209ENST00000460573 RNF222A6NCQ9 220 aa16.8■□□□□ 0.28
C9orf3-209ENST00000460573 SMLR1H3BR10 107 aa16.8■□□□□ 0.28
C9orf3-209ENST00000460573 H3BRN7 92 aa16.8■□□□□ 0.28
C9orf3-209ENST00000460573 C4BPBP20851 252 aa16.8■□□□□ 0.28
C9orf3-209ENST00000460573 PATE2Q6UY27 113 aa16.8■□□□□ 0.28
C9orf3-209ENST00000460573 WFDC1Q9HC57 220 aa16.8■□□□□ 0.28
C9orf3-209ENST00000460573 DNAJC4Q9NNZ3 241 aa16.8■□□□□ 0.28
C9orf3-209ENST00000460573 CD7P09564 240 aa16.79■□□□□ 0.28
C9orf3-209ENST00000460573 C10orf113Q5VZT2 155 aa16.79■□□□□ 0.28
C9orf3-209ENST00000460573 GBGT1Q8N5D6 347 aa16.79■□□□□ 0.28
C9orf3-209ENST00000460573 ARPC5O15511 151 aa16.78■□□□□ 0.28
C9orf3-209ENST00000460573 GALR1P47211 349 aa16.78■□□□□ 0.28
C9orf3-209ENST00000460573 LINC00305Q7Z4B0 112 aa16.78■□□□□ 0.28
C9orf3-209ENST00000460573 STXBP6Q8NFX7 210 aa16.78■□□□□ 0.28
C9orf3-209ENST00000460573 OR11H4Q8NGC9 324 aa16.78■□□□□ 0.28
C9orf3-209ENST00000460573 GATAD1Q8WUU5 269 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms