RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 PRADC1Q9BSG0 188 aa16.12■□□□□ 0.17
SNX27-204ENST00000458013 SNRNP200O75643 2136 aaKnown RBP16.12■□□□□ 0.17
SNX27-204ENST00000458013 H3BUX3 64 aa16.12■□□□□ 0.17
SNX27-204ENST00000458013 UBE2CO00762 179 aa16.12■□□□□ 0.17
SNX27-204ENST00000458013 NUP35Q8NFH5 326 aa16.11■□□□□ 0.17
SNX27-204ENST00000458013 GREB1Q4ZG55 1949 aa16.11■□□□□ 0.17
SNX27-204ENST00000458013 BCL6BQ8N143 479 aaPredicted RBP16.11■□□□□ 0.17
SNX27-204ENST00000458013 TPTE2P1Q5T6R2 138 aa16.11■□□□□ 0.17
SNX27-204ENST00000458013 ATXN8Q156A1 80 aa16.11■□□□□ 0.17
SNX27-204ENST00000458013 TAF1LQ8IZX4 1826 aa16.11■□□□□ 0.17
SNX27-204ENST00000458013 IGHV3-16A0A0C4DH30 117 aa16.11■□□□□ 0.17
SNX27-204ENST00000458013 EDA2RQ9HAV5 297 aa16.1■□□□□ 0.17
SNX27-204ENST00000458013 KNTC1P50748 2209 aa16.1■□□□□ 0.17
SNX27-204ENST00000458013 SPXQ9BT56 116 aa16.1■□□□□ 0.17
SNX27-204ENST00000458013 LINC00473A8K010 186 aa16.1■□□□□ 0.17
SNX27-204ENST00000458013 OVOL1O14753 267 aa16.1■□□□□ 0.17
SNX27-204ENST00000458013 CYTL1Q9NRR1 136 aa16.1■□□□□ 0.17
SNX27-204ENST00000458013 ADAMTS7Q9UKP4 1686 aa16.1■□□□□ 0.17
SNX27-204ENST00000458013 COL8A2P25067 703 aa16.1■□□□□ 0.17
SNX27-204ENST00000458013 MST1P26927 711 aa16.1■□□□□ 0.17
SNX27-204ENST00000458013 GLRX5Q86SX6 157 aa16.1■□□□□ 0.17
SNX27-204ENST00000458013 C1orf159Q96HA4 380 aa16.1■□□□□ 0.17
SNX27-204ENST00000458013 XIRP1Q702N8 1843 aaKnown RBP16.1■□□□□ 0.17
SNX27-204ENST00000458013 GAGE2EQ4V326 116 aa16.1■□□□□ 0.17
SNX27-204ENST00000458013 GAGE2DQ9UEU5 116 aa16.1■□□□□ 0.17
SNX27-204ENST00000458013 MRPS18CQ9Y3D5 142 aaKnown RBP16.1■□□□□ 0.17
SNX27-204ENST00000458013 NABP1Q96AH0 204 aa16.09■□□□□ 0.17
SNX27-204ENST00000458013 C8orf49Q96NF6 230 aa16.09■□□□□ 0.17
SNX27-204ENST00000458013 A0A087WX48 190 aa16.09■□□□□ 0.17
SNX27-204ENST00000458013 A0A0G2JNJ9 132 aa16.09■□□□□ 0.17
SNX27-204ENST00000458013 KLHL30-AS1Q8NEE0 82 aa16.09■□□□□ 0.17
SNX27-204ENST00000458013 Q9UFV3 132 aa16.09■□□□□ 0.17
SNX27-204ENST00000458013 CDK2AP2O75956 126 aa16.09■□□□□ 0.17
SNX27-204ENST00000458013 TMEM86BQ8N661 226 aa16.09■□□□□ 0.17
SNX27-204ENST00000458013 KNCNA6PVL3 124 aa16.09■□□□□ 0.17
SNX27-204ENST00000458013 ID3Q02535 119 aa16.09■□□□□ 0.17
SNX27-204ENST00000458013 NTF4P34130 210 aa16.09■□□□□ 0.17
SNX27-204ENST00000458013 ZNF562Q6V9R5 426 aa16.09■□□□□ 0.17
SNX27-204ENST00000458013 TMEM158Q8WZ71 300 aa16.09■□□□□ 0.17
SNX27-204ENST00000458013 LINC00479Q96M42 142 aa16.09■□□□□ 0.17
SNX27-204ENST00000458013 DNAJC13O75165 2243 aa16.08■□□□□ 0.17
SNX27-204ENST00000458013 TNFRSF6BO95407 300 aa16.08■□□□□ 0.16
SNX27-204ENST00000458013 DEFB130BP0DP73 79 aa16.08■□□□□ 0.16
SNX27-204ENST00000458013 DEFB130AP0DP74 79 aa16.08■□□□□ 0.16
SNX27-204ENST00000458013 CRYGSP22914 178 aa16.08■□□□□ 0.16
SNX27-204ENST00000458013 SUPT4H1P63272 117 aaKnown RBP16.08■□□□□ 0.16
SNX27-204ENST00000458013 Q71RC1 249 aaPredicted RBP16.08■□□□□ 0.16
SNX27-204ENST00000458013 F2Z2F3 143 aa16.08■□□□□ 0.16
SNX27-204ENST00000458013 IGKV1-5P01602 117 aa16.08■□□□□ 0.16
SNX27-204ENST00000458013 AGMATQ9BSE5 352 aa16.07■□□□□ 0.16
SNX27-204ENST00000458013 TMEM178BH3BS89 294 aa16.07■□□□□ 0.16
SNX27-204ENST00000458013 HSD52Q0P140 79 aa16.07■□□□□ 0.16
SNX27-204ENST00000458013 TEX43Q6ZNM6 134 aa16.07■□□□□ 0.16
SNX27-204ENST00000458013 GAFA1Q96PS6 74 aa16.07■□□□□ 0.16
SNX27-204ENST00000458013 H0YJW9 148 aa16.07■□□□□ 0.16
SNX27-204ENST00000458013 DKK1O94907 266 aa16.06■□□□□ 0.16
SNX27-204ENST00000458013 FAM90A2PQ658T7 463 aa16.06■□□□□ 0.16
SNX27-204ENST00000458013 AMN1Q8IY45 258 aa16.06■□□□□ 0.16
SNX27-204ENST00000458013 RALGAPA1Q6GYQ0 2036 aa16.06■□□□□ 0.16
SNX27-204ENST00000458013 FGF16O43320 207 aa16.06■□□□□ 0.16
SNX27-204ENST00000458013 WDR83OSQ9Y284 106 aa16.06■□□□□ 0.16
SNX27-204ENST00000458013 MSRB2Q9Y3D2 182 aa16.06■□□□□ 0.16
SNX27-204ENST00000458013 A0A1B0GUS0 222 aa16.06■□□□□ 0.16
SNX27-204ENST00000458013 CD59P13987 128 aa16.05■□□□□ 0.16
SNX27-204ENST00000458013 GAGE2AQ6NT46 116 aa16.05■□□□□ 0.16
SNX27-204ENST00000458013 PIP4P2Q8N4L2 257 aa16.05■□□□□ 0.16
SNX27-204ENST00000458013 COLCA2A8K830 154 aa16.05■□□□□ 0.16
SNX27-204ENST00000458013 ITGB1BP1O14713 200 aa16.05■□□□□ 0.16
SNX27-204ENST00000458013 PSG3Q16557 428 aa16.05■□□□□ 0.16
SNX27-204ENST00000458013 GTSF1LQ9H1H1 148 aa16.05■□□□□ 0.16
SNX27-204ENST00000458013 A0A0G2JMZ2 1700 aa16.05■□□□□ 0.16
SNX27-204ENST00000458013 LRRC37A2A6NM11 1700 aa16.05■□□□□ 0.16
SNX27-204ENST00000458013 CLPSP04118 112 aa16.05■□□□□ 0.16
SNX27-204ENST00000458013 ZNF883P0CG24 379 aa16.05■□□□□ 0.16
SNX27-204ENST00000458013 KLK9Q9UKQ9 250 aa16.05■□□□□ 0.16
SNX27-204ENST00000458013 C2orf82Q6UX34 121 aa16.04■□□□□ 0.16
SNX27-204ENST00000458013 RALGAPA2Q2PPJ7 1873 aa16.04■□□□□ 0.16
SNX27-204ENST00000458013 DTX2Q86UW9 622 aa16.04■□□□□ 0.16
SNX27-204ENST00000458013 C20orf204Q6ZNR8 217 aa16.04■□□□□ 0.16
SNX27-204ENST00000458013 LOC102723996A0A087X1L8 192 aa16.04■□□□□ 0.16
SNX27-204ENST00000458013 BUB1B-PAK6H3BSN5 160 aa16.04■□□□□ 0.16
SNX27-204ENST00000458013 IL18BPO95998 194 aa16.04■□□□□ 0.16
SNX27-204ENST00000458013 A0A0G2JRQ6 117 aa16.03■□□□□ 0.16
SNX27-204ENST00000458013 MORN3Q6PF18 240 aaPredicted RBP16.03■□□□□ 0.16
SNX27-204ENST00000458013 IGLV3-12A0A075B6K2 115 aa16.03■□□□□ 0.16
SNX27-204ENST00000458013 PRSS57Q6UWY2 283 aa16.03■□□□□ 0.16
SNX27-204ENST00000458013 NDUFS6O75380 124 aaKnown RBP16.03■□□□□ 0.16
SNX27-204ENST00000458013 ZFP36L1Q07352 338 aaKnown RBP16.03■□□□□ 0.16
SNX27-204ENST00000458013 LINC01551Q86U37 167 aa16.03■□□□□ 0.16
SNX27-204ENST00000458013 STPG4Q8N801 248 aa16.03■□□□□ 0.16
SNX27-204ENST00000458013 LOC285556D6RIA3 1793 aa16.02■□□□□ 0.16
SNX27-204ENST00000458013 MPV17L2Q567V2 206 aa16.02■□□□□ 0.16
SNX27-204ENST00000458013 PNRC2Q9NPJ4 139 aaKnown RBP16.02■□□□□ 0.16
SNX27-204ENST00000458013 ARHGEF17Q96PE2 2063 aaPredicted RBP16.02■□□□□ 0.16
SNX27-204ENST00000458013 TNFSF13O75888 250 aa16.02■□□□□ 0.16
SNX27-204ENST00000458013 CD5P06127 495 aa16.02■□□□□ 0.16
SNX27-204ENST00000458013 TRAV26-2A0A0B4J265 109 aa16.02■□□□□ 0.16
SNX27-204ENST00000458013 C6orf226Q5I0X4 101 aa16.02■□□□□ 0.16
SNX27-204ENST00000458013 SLC25A48Q6ZT89 311 aaKnown RBP16.02■□□□□ 0.16
SNX27-204ENST00000458013 TMEM238C9JI98 176 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms