RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 AMTNQ6UX39 209 aa11.41□□□□□ -0.58
GPC1-206ENST00000455111 FOXI2Q6ZQN5 318 aa11.41□□□□□ -0.58
GPC1-206ENST00000455111 NOXA1Q86UR1 476 aa11.41□□□□□ -0.58
GPC1-206ENST00000455111 CLUHP3Q96NS8 147 aa11.41□□□□□ -0.58
GPC1-206ENST00000455111 TRGV9Q99603 122 aa11.41□□□□□ -0.58
GPC1-206ENST00000455111 BCL7BQ9BQE9 202 aa11.41□□□□□ -0.58
GPC1-206ENST00000455111 C1QTNF4Q9BXJ3 329 aa11.41□□□□□ -0.58
GPC1-206ENST00000455111 SLC25A32Q9H2D1 315 aa11.41□□□□□ -0.58
GPC1-206ENST00000455111 DKK2Q9UBU2 259 aa11.41□□□□□ -0.58
GPC1-206ENST00000455111 A0A0J9YX75 114 aa11.4□□□□□ -0.58
GPC1-206ENST00000455111 EMP1P54849 157 aa11.4□□□□□ -0.58
GPC1-206ENST00000455111 TMED4Q7Z7H5 227 aa11.4□□□□□ -0.58
GPC1-206ENST00000455111 POM121L12Q8N7R1 296 aa11.4□□□□□ -0.58
GPC1-206ENST00000455111 SLC35E1Q96K37 410 aa11.4□□□□□ -0.58
GPC1-206ENST00000455111 MAGT1Q9H0U3 335 aa11.4□□□□□ -0.58
GPC1-206ENST00000455111 IGHV3OR16-12A0A075B7B8 117 aa11.39□□□□□ -0.59
GPC1-206ENST00000455111 TRAV8-2A0A0B4J237 113 aa11.39□□□□□ -0.59
GPC1-206ENST00000455111 M0R2N4 97 aa11.39□□□□□ -0.59
GPC1-206ENST00000455111 PPP1R1AQ13522 171 aa11.39□□□□□ -0.59
GPC1-206ENST00000455111 C1orf194Q5T5A4 169 aa11.39□□□□□ -0.59
GPC1-206ENST00000455111 FAM222AQ5U5X8 452 aa11.39□□□□□ -0.59
GPC1-206ENST00000455111 FAM78BQ5VT40 261 aa11.39□□□□□ -0.59
GPC1-206ENST00000455111 IGFL4Q6B9Z1 124 aa11.39□□□□□ -0.59
GPC1-206ENST00000455111 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.39□□□□□ -0.59
GPC1-206ENST00000455111 MCFD2Q8NI22 146 aa11.39□□□□□ -0.59
GPC1-206ENST00000455111 CACFD1Q9UGQ2 172 aa11.39□□□□□ -0.59
GPC1-206ENST00000455111 DUXBA0A1W2PPF3 345 aa11.38□□□□□ -0.59
GPC1-206ENST00000455111 CRXO43186 299 aaPredicted RBP11.38□□□□□ -0.59
GPC1-206ENST00000455111 SFT2D2O95562 160 aa11.38□□□□□ -0.59
GPC1-206ENST00000455111 ATP5IP56385 69 aaPredicted RBP11.38□□□□□ -0.59
GPC1-206ENST00000455111 NUTF2P61970 127 aaKnown RBP11.38□□□□□ -0.59
GPC1-206ENST00000455111 TMEM128Q5BJH2 165 aa11.38□□□□□ -0.59
GPC1-206ENST00000455111 OR4B1Q8NGF8 309 aa11.38□□□□□ -0.59
GPC1-206ENST00000455111 SCGB3A2Q96PL1 93 aa11.38□□□□□ -0.59
GPC1-206ENST00000455111 SMIM9A6NGZ8 99 aa11.37□□□□□ -0.59
GPC1-206ENST00000455111 PMS2P5A8MQ11 134 aa11.37□□□□□ -0.59
GPC1-206ENST00000455111 SNRPGP15A8MWD9 76 aa11.37□□□□□ -0.59
GPC1-206ENST00000455111 ISLRO14498 428 aa11.37□□□□□ -0.59
GPC1-206ENST00000455111 SPART-AS1P0CW21 52 aa11.37□□□□□ -0.59
GPC1-206ENST00000455111 SLC25A6P12236 298 aa11.37□□□□□ -0.59
GPC1-206ENST00000455111 ANXA3P12429 323 aa11.37□□□□□ -0.59
GPC1-206ENST00000455111 SRPXP78539 464 aa11.37□□□□□ -0.59
GPC1-206ENST00000455111 Q6ZR54 194 aa11.37□□□□□ -0.59
GPC1-206ENST00000455111 NDUFAF3Q9BU61 184 aa11.37□□□□□ -0.59
GPC1-206ENST00000455111 ZNF98A6NK75 572 aa11.36□□□□□ -0.59
GPC1-206ENST00000455111 H3BP45 60 aa11.36□□□□□ -0.59
GPC1-206ENST00000455111 WRBO00258 174 aa11.36□□□□□ -0.59
GPC1-206ENST00000455111 SYNGR2O43760 224 aa11.36□□□□□ -0.59
GPC1-206ENST00000455111 CCNKO75909 580 aa11.36□□□□□ -0.59
GPC1-206ENST00000455111 PRB4P10163 310 aaPredicted RBP11.36□□□□□ -0.59
GPC1-206ENST00000455111 PSG9Q00887 426 aa11.36□□□□□ -0.59
GPC1-206ENST00000455111 GGNBP1Q5YKI7 109 aa11.36□□□□□ -0.59
GPC1-206ENST00000455111 CCDC190Q86UF4 302 aa11.36□□□□□ -0.59
GPC1-206ENST00000455111 OR8I2Q8N0Y5 310 aa11.36□□□□□ -0.59
GPC1-206ENST00000455111 RFNGQ9Y644 331 aa11.36□□□□□ -0.59
GPC1-206ENST00000455111 ADAP1O75689 374 aa11.35□□□□□ -0.59
GPC1-206ENST00000455111 HOXB5P09067 269 aa11.35□□□□□ -0.59
GPC1-206ENST00000455111 P0DMU3 169 aa11.35□□□□□ -0.59
GPC1-206ENST00000455111 FAM231AP0DMU4 169 aa11.35□□□□□ -0.59
GPC1-206ENST00000455111 FAM231CP0DMU5 169 aa11.35□□□□□ -0.59
GPC1-206ENST00000455111 VAMP1P23763 118 aa11.35□□□□□ -0.59
GPC1-206ENST00000455111 NUP62P37198 522 aaPredicted RBP11.35□□□□□ -0.59
GPC1-206ENST00000455111 ID1P41134 155 aa11.35□□□□□ -0.59
GPC1-206ENST00000455111 PYDC2Q56P42 97 aa11.35□□□□□ -0.59
GPC1-206ENST00000455111 LINC00336Q6ZUF6 198 aa11.35□□□□□ -0.59
GPC1-206ENST00000455111 TOMM5Q8N4H5 51 aa11.35□□□□□ -0.59
GPC1-206ENST00000455111 COQ8AQ8NI60 647 aa11.35□□□□□ -0.59
GPC1-206ENST00000455111 SLC25A22Q9H936 323 aa11.35□□□□□ -0.59
GPC1-206ENST00000455111 PAIP2BQ9ULR5 123 aaKnown RBP11.35□□□□□ -0.59
GPC1-206ENST00000455111 YTHDF2Q9Y5A9 579 aaKnown RBP11.35□□□□□ -0.59
GPC1-206ENST00000455111 HSPG2P98160 4391 aa11.35□□□□□ -0.59
GPC1-206ENST00000455111 LOC102723971A0A1B0GUV8 181 aa11.34□□□□□ -0.59
GPC1-206ENST00000455111 PLAC8L1A1L4L8 177 aa11.34□□□□□ -0.59
GPC1-206ENST00000455111 RAB11AP62491 216 aa11.34□□□□□ -0.59
GPC1-206ENST00000455111 ACOT7LQ6ZUV0 252 aa11.34□□□□□ -0.59
GPC1-206ENST00000455111 RNF182Q8N6D2 247 aa11.34□□□□□ -0.59
GPC1-206ENST00000455111 NIPSNAP3BQ9BS92 247 aa11.34□□□□□ -0.59
GPC1-206ENST00000455111 RSG1Q9BU20 258 aa11.34□□□□□ -0.59
GPC1-206ENST00000455111 RBM38Q9H0Z9 239 aaKnown RBP11.34□□□□□ -0.59
GPC1-206ENST00000455111 TMED3Q9Y3Q3 217 aa11.34□□□□□ -0.59
GPC1-206ENST00000455111 LRP1BQ9NZR2 4599 aa11.33□□□□□ -0.6
GPC1-206ENST00000455111 IGLV2-18A0A075B6J9 118 aa11.33□□□□□ -0.6
GPC1-206ENST00000455111 TMEM189A5PLL7 270 aa11.33□□□□□ -0.6
GPC1-206ENST00000455111 PRSS29PA6NIE9 313 aa11.33□□□□□ -0.6
GPC1-206ENST00000455111 H3BRN7 92 aa11.33□□□□□ -0.6
GPC1-206ENST00000455111 ID3Q02535 119 aa11.33□□□□□ -0.6
GPC1-206ENST00000455111 OXA1LQ15070 435 aa11.33□□□□□ -0.6
GPC1-206ENST00000455111 LGALS9BQ3B8N2 356 aa11.33□□□□□ -0.6
GPC1-206ENST00000455111 SPANXN5Q5MJ07 72 aa11.33□□□□□ -0.6
GPC1-206ENST00000455111 OR11H7Q8NGC8 314 aa11.33□□□□□ -0.6
GPC1-206ENST00000455111 C16orf92Q96LL3 132 aa11.33□□□□□ -0.6
GPC1-206ENST00000455111 DOK5Q9P104 306 aa11.33□□□□□ -0.6
GPC1-206ENST00000455111 SLC45A2Q9UMX9 530 aa11.33□□□□□ -0.6
GPC1-206ENST00000455111 FLVCR2Q9UPI3 526 aa11.33□□□□□ -0.6
GPC1-206ENST00000455111 M0R2Z0 102 aa11.32□□□□□ -0.6
GPC1-206ENST00000455111 ORM2P19652 201 aa11.32□□□□□ -0.6
GPC1-206ENST00000455111 AZU1P20160 251 aa11.32□□□□□ -0.6
GPC1-206ENST00000455111 CNN1P51911 297 aaKnown RBP11.32□□□□□ -0.6
GPC1-206ENST00000455111 POLR2GP62487 172 aaKnown RBP eCLIP11.32□□□□□ -0.6
GPC1-206ENST00000455111 BAK1Q16611 211 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms