RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 IQCJQ1A5X6 159 aa9.62□□□□□ -0.87
SMPD4-213ENST00000454468 OR4C5Q8NGB2 326 aa9.62□□□□□ -0.87
SMPD4-213ENST00000454468 HIGD1AQ9Y241 93 aa9.62□□□□□ -0.87
SMPD4-213ENST00000454468 ABCA12Q86UK0 2595 aa9.62□□□□□ -0.87
SMPD4-213ENST00000454468 IGKV3-7A0A075B6H7 116 aa9.62□□□□□ -0.87
SMPD4-213ENST00000454468 PRSS46E5RG02 174 aa9.62□□□□□ -0.87
SMPD4-213ENST00000454468 RUSC1-AS1Q66K80 236 aa9.62□□□□□ -0.87
SMPD4-213ENST00000454468 RNASEKQ6P5S7 137 aaKnown RBP9.62□□□□□ -0.87
SMPD4-213ENST00000454468 TCF24Q7RTU0 167 aa9.62□□□□□ -0.87
SMPD4-213ENST00000454468 CACNG8Q8WXS5 425 aa9.62□□□□□ -0.87
SMPD4-213ENST00000454468 DPM3Q9P2X0 92 aa9.62□□□□□ -0.87
SMPD4-213ENST00000454468 EPG5Q9HCE0 2579 aa9.61□□□□□ -0.87
SMPD4-213ENST00000454468 SERF1AO75920 110 aa9.61□□□□□ -0.87
SMPD4-213ENST00000454468 OR2J3O76001 311 aa9.61□□□□□ -0.87
SMPD4-213ENST00000454468 PSG1P11464 419 aa9.61□□□□□ -0.87
SMPD4-213ENST00000454468 ATOH7Q8N100 152 aa9.61□□□□□ -0.87
SMPD4-213ENST00000454468 TBX15Q96SF7 602 aa9.61□□□□□ -0.87
SMPD4-213ENST00000454468 F2Z2F3 143 aa9.61□□□□□ -0.87
SMPD4-213ENST00000454468 PEX7O00628 323 aa9.61□□□□□ -0.87
SMPD4-213ENST00000454468 NUPR1O60356 82 aa9.61□□□□□ -0.87
SMPD4-213ENST00000454468 GZMBP10144 247 aa9.61□□□□□ -0.87
SMPD4-213ENST00000454468 SELENOTP62341 195 aa9.61□□□□□ -0.87
SMPD4-213ENST00000454468 C3orf36Q3SXR2 165 aa9.61□□□□□ -0.87
SMPD4-213ENST00000454468 ST6GALNAC3Q8NDV1 305 aa9.61□□□□□ -0.87
SMPD4-213ENST00000454468 FAM168AQ92567 244 aa9.61□□□□□ -0.87
SMPD4-213ENST00000454468 PGLYRP4Q96LB8 373 aa9.61□□□□□ -0.87
SMPD4-213ENST00000454468 CEACAM3P40198 252 aa9.6□□□□□ -0.87
SMPD4-213ENST00000454468 UQCRFS1P47985 274 aa9.6□□□□□ -0.87
SMPD4-213ENST00000454468 JOSD1Q15040 202 aaPredicted RBP9.6□□□□□ -0.87
SMPD4-213ENST00000454468 TXNDC17Q9BRA2 123 aa9.6□□□□□ -0.87
SMPD4-213ENST00000454468 CGB1A6NKQ9 187 aa9.6□□□□□ -0.87
SMPD4-213ENST00000454468 CORTO00230 105 aa9.6□□□□□ -0.87
SMPD4-213ENST00000454468 ZNF207O43670 478 aaKnown RBP9.6□□□□□ -0.87
SMPD4-213ENST00000454468 GGCTO75223 188 aaKnown RBP9.6□□□□□ -0.87
SMPD4-213ENST00000454468 COL8A1P27658 744 aa9.6□□□□□ -0.87
SMPD4-213ENST00000454468 NHLH1Q02575 133 aa9.6□□□□□ -0.87
SMPD4-213ENST00000454468 IGFL4Q6B9Z1 124 aa9.6□□□□□ -0.87
SMPD4-213ENST00000454468 BEND2Q8NDZ0 799 aa9.6□□□□□ -0.87
SMPD4-213ENST00000454468 SORL1Q92673 2214 aa9.6□□□□□ -0.87
SMPD4-213ENST00000454468 TMEM30BQ3MIR4 351 aa9.6□□□□□ -0.87
SMPD4-213ENST00000454468 OR5R1Q8NH85 324 aa9.6□□□□□ -0.87
SMPD4-213ENST00000454468 RNASEH2CQ8TDP1 164 aaKnown RBP9.6□□□□□ -0.87
SMPD4-213ENST00000454468 SERTM2A0A1B0GWG4 89 aa9.59□□□□□ -0.87
SMPD4-213ENST00000454468 HSBP1O75506 76 aa9.59□□□□□ -0.87
SMPD4-213ENST00000454468 AMY1AP04745 511 aa9.59□□□□□ -0.87
SMPD4-213ENST00000454468 UCNP55089 124 aa9.59□□□□□ -0.87
SMPD4-213ENST00000454468 TPPP2P59282 170 aa9.59□□□□□ -0.87
SMPD4-213ENST00000454468 SLC25A2Q9BXI2 301 aa9.59□□□□□ -0.87
SMPD4-213ENST00000454468 M0QZK8 103 aa9.59□□□□□ -0.87
SMPD4-213ENST00000454468 PATE2Q6UY27 113 aa9.59□□□□□ -0.87
SMPD4-213ENST00000454468 OR4F17Q8NGA8 305 aa9.59□□□□□ -0.87
SMPD4-213ENST00000454468 ZNF503Q96F45 646 aa9.59□□□□□ -0.87
SMPD4-213ENST00000454468 NAV2Q8IVL1 2488 aa9.59□□□□□ -0.87
SMPD4-213ENST00000454468 J3KRW8 73 aa9.59□□□□□ -0.87
SMPD4-213ENST00000454468 P01737 135 aa9.59□□□□□ -0.87
SMPD4-213ENST00000454468 POU2AF1Q16633 256 aa9.59□□□□□ -0.87
SMPD4-213ENST00000454468 ACTL10Q5JWF8 245 aa9.59□□□□□ -0.87
SMPD4-213ENST00000454468 OR2T8A6NH00 312 aa9.58□□□□□ -0.88
SMPD4-213ENST00000454468 CHEK1O14757 476 aa9.58□□□□□ -0.88
SMPD4-213ENST00000454468 APCSP02743 223 aa9.58□□□□□ -0.88
SMPD4-213ENST00000454468 VAMP3Q15836 100 aa9.58□□□□□ -0.88
SMPD4-213ENST00000454468 ERASQ7Z444 233 aa9.58□□□□□ -0.88
SMPD4-213ENST00000454468 TXN2Q99757 166 aa9.58□□□□□ -0.88
SMPD4-213ENST00000454468 Q9H3A6 140 aa9.58□□□□□ -0.88
SMPD4-213ENST00000454468 RPL11P62913 178 aaKnown RBP9.58□□□□□ -0.88
SMPD4-213ENST00000454468 ADORA2A-AS1P86434 159 aa9.58□□□□□ -0.88
SMPD4-213ENST00000454468 SP5Q6BEB4 398 aaPredicted RBP9.58□□□□□ -0.88
SMPD4-213ENST00000454468 BORCS7Q96B45 105 aa9.58□□□□□ -0.88
SMPD4-213ENST00000454468 RNF2Q99496 336 aa9.58□□□□□ -0.88
SMPD4-213ENST00000454468 IGLC7A0M8Q6 106 aa9.58□□□□□ -0.88
SMPD4-213ENST00000454468 M0R3E3 92 aa9.58□□□□□ -0.88
SMPD4-213ENST00000454468 GNLYP22749 145 aa9.58□□□□□ -0.88
SMPD4-213ENST00000454468 MRPL32Q9BYC8 188 aaKnown RBP9.58□□□□□ -0.88
SMPD4-213ENST00000454468 NCOR1P1Q9H4R4 102 aa9.58□□□□□ -0.88
SMPD4-213ENST00000454468 HIGD1CA8MV81 97 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 CIDEAO60543 219 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 IGLV2-23P01705 113 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 CIARTQ8N365 385 aaPredicted RBP9.57□□□□□ -0.88
SMPD4-213ENST00000454468 A0A1W2PRE2 83 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 NBR2O15453 112 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 TCTAP57738 103 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 COL5A1-AS1Q5SY13 56 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 TEX45Q8NA69 505 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 C17orf77Q96MU5 243 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 DSCAML1Q8TD84 2053 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 SVEP1Q4LDE5 3571 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 CSMD1Q96PZ7 3565 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 WNK1Q9H4A3 2382 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 MAS1LP35410 378 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 COMPP49747 757 aaPredicted RBP9.57□□□□□ -0.88
SMPD4-213ENST00000454468 FOXL1Q12952 345 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 LY6EQ16553 131 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 TMEM219Q86XT9 240 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 NUDT10Q8NFP7 164 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 NUDT11Q96G61 164 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 ZNF586Q9NXT0 402 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 EPDR1Q9UM22 224 aa9.57□□□□□ -0.88
SMPD4-213ENST00000454468 M0QZ24 198 aa9.56□□□□□ -0.88
SMPD4-213ENST00000454468 VMO1Q7Z5L0 202 aa9.56□□□□□ -0.88
SMPD4-213ENST00000454468 ST6GALNAC6Q969X2 333 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms