RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 IGHV3OR16-8A0A075B7F1 116 aa8.79□□□□□ -1
SCN9A-204ENST00000452182 IGHV7-4-1A0A0J9YVY3 117 aa8.79□□□□□ -1
SCN9A-204ENST00000452182 KANTRA0A1W2PQU2 76 aa8.79□□□□□ -1
SCN9A-204ENST00000452182 SEC14L6B5MCN3 397 aa8.79□□□□□ -1
SCN9A-204ENST00000452182 BCL2L11O43521 198 aa8.79□□□□□ -1
SCN9A-204ENST00000452182 HNRNPCP07910 306 aaKnown RBP eCLIP8.79□□□□□ -1
SCN9A-204ENST00000452182 B2MP61769 119 aa8.79□□□□□ -1
SCN9A-204ENST00000452182 C9orf66Q5T8R8 295 aa8.79□□□□□ -1
SCN9A-204ENST00000452182 MIC13Q5XKP0 118 aa8.79□□□□□ -1
SCN9A-204ENST00000452182 RPL7L1Q6DKI1 246 aaKnown RBP8.79□□□□□ -1
SCN9A-204ENST00000452182 ADAMTSL5Q6ZMM2 481 aa8.79□□□□□ -1
SCN9A-204ENST00000452182 Q6ZRG5 221 aa8.79□□□□□ -1
SCN9A-204ENST00000452182 TMUB2Q71RG4 321 aa8.79□□□□□ -1
SCN9A-204ENST00000452182 PSMG3Q9BT73 122 aaPredicted RBP8.79□□□□□ -1
SCN9A-204ENST00000452182 GPR61Q9BZJ8 451 aa8.79□□□□□ -1
SCN9A-204ENST00000452182 SLC39A9Q9NUM3 307 aa8.79□□□□□ -1
SCN9A-204ENST00000452182 SMPXQ9UHP9 88 aa8.79□□□□□ -1
SCN9A-204ENST00000452182 PFDN2Q9UHV9 154 aa8.79□□□□□ -1
SCN9A-204ENST00000452182 RABAC1Q9UI14 185 aa8.79□□□□□ -1
SCN9A-204ENST00000452182 PXMP4Q9Y6I8 212 aa8.79□□□□□ -1
SCN9A-204ENST00000452182 A0A1W2PS18 150 aa8.78□□□□□ -1
SCN9A-204ENST00000452182 HYPMO75409 117 aa8.78□□□□□ -1
SCN9A-204ENST00000452182 S100A7P31151 101 aa8.78□□□□□ -1
SCN9A-204ENST00000452182 BMI1P35226 326 aa8.78□□□□□ -1
SCN9A-204ENST00000452182 LYZP61626 148 aa8.78□□□□□ -1
SCN9A-204ENST00000452182 S100A7AQ86SG5 101 aa8.78□□□□□ -1
SCN9A-204ENST00000452182 C9orf62Q8N4C0 152 aa8.78□□□□□ -1
SCN9A-204ENST00000452182 NARS2Q96I59 477 aaKnown RBP8.78□□□□□ -1
SCN9A-204ENST00000452182 PBDC1Q9BVG4 233 aa8.78□□□□□ -1
SCN9A-204ENST00000452182 ARV1Q9H2C2 271 aa8.78□□□□□ -1
SCN9A-204ENST00000452182 VSIRQ9H7M9 311 aa8.78□□□□□ -1
SCN9A-204ENST00000452182 TECRQ9NZ01 308 aaKnown RBP8.78□□□□□ -1
SCN9A-204ENST00000452182 CHEK1O14757 476 aa8.77□□□□□ -1.01
SCN9A-204ENST00000452182 ZNF207O43670 478 aaKnown RBP8.77□□□□□ -1.01
SCN9A-204ENST00000452182 SAP30O75446 220 aa8.77□□□□□ -1.01
SCN9A-204ENST00000452182 ORM2P19652 201 aa8.77□□□□□ -1.01
SCN9A-204ENST00000452182 EDN2P20800 178 aa8.77□□□□□ -1.01
SCN9A-204ENST00000452182 OR1B1Q8NGR6 318 aa8.77□□□□□ -1.01
SCN9A-204ENST00000452182 GNPNAT1Q96EK6 184 aaPredicted RBP8.77□□□□□ -1.01
SCN9A-204ENST00000452182 PFDN5Q99471 154 aa8.77□□□□□ -1.01
SCN9A-204ENST00000452182 RSG1Q9BU20 258 aa8.77□□□□□ -1.01
SCN9A-204ENST00000452182 BUB3O43684 328 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 IGLV1-51P01701 117 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 CD5P06127 495 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 IGLL1P15814 213 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 ATP6V0CP27449 155 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 EIF5AP63241 154 aaKnown RBP8.76□□□□□ -1.01
SCN9A-204ENST00000452182 SERF2P84101 59 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 C1orf194Q5T5A4 169 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 LAMTOR1Q6IAA8 161 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 PATE2Q6UY27 113 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 HSD17B11Q8NBQ5 300 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 OR1L4Q8NGR5 311 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 OR2G3Q8NGZ4 309 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 GATAD1Q8WUU5 269 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 TMEM37Q8WXS4 190 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 GRAMD2BQ96HH9 432 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 RHPN1-AS1Q9BWJ2 59 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 TMEM231Q9H6L2 316 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 DNAJC4Q9NNZ3 241 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 RNF24Q9Y225 148 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 HIGD1AQ9Y241 93 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 COX7A2P2O60397 106 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 APOHP02749 345 aaPredicted RBP8.76□□□□□ -1.01
SCN9A-204ENST00000452182 OR5G3P0C626 314 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 C4BPBP20851 252 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 DEFB114Q30KQ6 69 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 OR2K2Q8NGT1 345 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 STOML3Q8TAV4 291 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 ST8SIA2Q92186 375 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 ZNF471Q9BX82 626 aaPredicted RBP8.76□□□□□ -1.01
SCN9A-204ENST00000452182 DOK5Q9P104 306 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 MLXQ9UH92 298 aa8.76□□□□□ -1.01
SCN9A-204ENST00000452182 H3BRN7 92 aa8.75□□□□□ -1.01
SCN9A-204ENST00000452182 C10orf113Q5VZT2 155 aa8.75□□□□□ -1.01
SCN9A-204ENST00000452182 C16orf54Q6UWD8 224 aa8.75□□□□□ -1.01
SCN9A-204ENST00000452182 DYNLRB2Q8TF09 96 aa8.75□□□□□ -1.01
SCN9A-204ENST00000452182 SHANK2-AS3Q9BTD1 123 aa8.75□□□□□ -1.01
SCN9A-204ENST00000452182 SLC25A39Q9BZJ4 359 aaPredicted RBP8.75□□□□□ -1.01
SCN9A-204ENST00000452182 IGHV3-49A0A0A0MS15 119 aa8.74□□□□□ -1.01
SCN9A-204ENST00000452182 TRAV25A0A0B4J276 109 aa8.74□□□□□ -1.01
SCN9A-204ENST00000452182 ZNF98A6NK75 572 aa8.74□□□□□ -1.01
SCN9A-204ENST00000452182 SPP1P10451 314 aa8.74□□□□□ -1.01
SCN9A-204ENST00000452182 TPT1P13693 172 aaKnown RBP8.74□□□□□ -1.01
SCN9A-204ENST00000452182 FFAR4Q5NUL3 377 aa8.74□□□□□ -1.01
SCN9A-204ENST00000452182 FAM90A2PQ658T7 463 aa8.74□□□□□ -1.01
SCN9A-204ENST00000452182 LINC00305Q7Z4B0 112 aa8.74□□□□□ -1.01
SCN9A-204ENST00000452182 SLC51BQ86UW2 128 aa8.74□□□□□ -1.01
SCN9A-204ENST00000452182 BAP18Q8IXM2 172 aa8.74□□□□□ -1.01
SCN9A-204ENST00000452182 GLMPQ8WWB7 406 aa8.74□□□□□ -1.01
SCN9A-204ENST00000452182 PPP1R14BQ96C90 147 aa8.74□□□□□ -1.01
SCN9A-204ENST00000452182 UHRF2Q96PU4 802 aa8.74□□□□□ -1.01
SCN9A-204ENST00000452182 RNF2Q99496 336 aa8.74□□□□□ -1.01
SCN9A-204ENST00000452182 IGHV3OR16-13A0A075B7E8 117 aa8.73□□□□□ -1.01
SCN9A-204ENST00000452182 IGHV3-74A0A0B4J1X5 117 aa8.73□□□□□ -1.01
SCN9A-204ENST00000452182 HELTA6NFD8 242 aa8.73□□□□□ -1.01
SCN9A-204ENST00000452182 MBP02144 154 aa8.73□□□□□ -1.01
SCN9A-204ENST00000452182 SEC11BP0C7V7 166 aa8.73□□□□□ -1.01
SCN9A-204ENST00000452182 M6PRP20645 277 aa8.73□□□□□ -1.01
SCN9A-204ENST00000452182 NKX2-5P52952 324 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms